TM9SF4

General Information

Gene Name       : TM9SF4
Gene ID             : ENSG00000101337.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TM9SF4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TM9SF4ENSG00000101337.1520.1923.7321.96ENCSR000AEF
HepG2TM9SF4ENSG00000101337.1585.8881.4983.69ENCSR985KAT
K562TM9SF4ENSG00000101337.1529.6331.1730.40ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TM9SF4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TM9SF4 RNA is bound by 44 proteins.  







eCLIP assay for TM9SF4 is not avaliable on ENCORE database.





44 proteins are bound to TM9SF4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203075466830754728+3'-UTR4.7187624.16307HepG2UPF1
chr203075343030753516+3'-UTR4.0485923.75073HepG2UPF1
chr203075415130754214+3'-UTR3.2212410.79089HepG2IGF2BP1
chr203075346230753542+3'-UTR4.1861810.57492HepG2TIA1
chr203075414430754246+3'-UTR5.1105241.79234HepG2UPF1
chr203075460530754710+3'-UTR3.556998.41382HepG2IGF2BP3
chr203075362130753691+3'-UTR4.3993319.74007HepG2AKAP1
chr203072945330729467+3'-UTR,CDS3.059993.90804HepG2GRWD1
chr203075426730754313+3'-UTR5.2343110.16127HepG2IGF2BP3
chr203075379430753858+3'-UTR3.343633.34822K562RBM15
chr203075357830753621+3'-UTR5.1531417.18151HepG2AKAP1
chr203075431330754372+3'-UTR3.736678.80922HepG2IGF2BP3
chr203075335630753416+3'-UTR4.0370115.21678HepG2AKAP1
chr203075476230754801+3'-UTR3.254489.59941HepG2AKAP1
chr203072958330729624+3'-UTR,CDS3.570217.86100HepG2RPS3
chr203072957430729629+3'-UTR,CDS4.2091228.23172HepG2SND1
chr203075466730754739+3'-UTR5.3335010.05528HepG2PCBP1
chr203075377330753861+3'-UTR4.1277023.13710HepG2AKAP1
chr203075324530753307+3'-UTR4.5453916.61784HepG2RPS3
chr203075467430754740+3'-UTR4.4013819.43201HepG2AKAP1
chr203075342730753455+3'-UTR4.5516516.70837HepG2AKAP1
chr203075370830753767+3'-UTR5.4102334.36041HepG2UPF1
chr203075418030754214+3'-UTR3.256656.40708HepG2IGF2BP3
chr203075413630754184+3'-UTR5.7350026.28356HepG2AKAP1
chr203075475830754824+3'-UTR5.9464415.35264HepG2IGF2BP3
chr203075475830754821+3'-UTR4.5067318.18820HepG2IGF2BP1
chr203075418430754220+3'-UTR6.5507524.86492HepG2AKAP1
chr203075474130754819+3'-UTR3.630418.05487K562IGF2BP1
chr203075411830754238+3'-UTR4.3226715.01187K562UPF1
chr203075424130754267+3'-UTR4.834116.30789HepG2IGF2BP3
chr203075408530754136+3'-UTR3.9680812.86179HepG2AKAP1
chr203072083730720911+3'-UTR,5'-UTR,CDS3.0299010.30206HepG2RPS3
chr203075476430754807+3'-UTR3.843633.28989K562RBM15
chr203075451530754563+3'-UTR3.383224.19285K562IGF2BP1
chr203075451330754566+3'-UTR4.1009815.76818HepG2AKAP1
chr203075451630754557+3'-UTR4.107265.98283HepG2IGF2BP3
chr203075358030753708+3'-UTR5.9164740.05244HepG2UPF1
chr203075473930754818+3'-UTR4.5697615.16706K562UPF1
chr203072936530729458+3'-UTR,CDS3.076947.99225K562ZNF622
chr203075342130753525+3'-UTR3.4041211.93078K562UPF1
chr203075392430753997+3'-UTR3.538907.55751K562UPF1
chr203075410330754193+3'-UTR4.052568.93808HepG2PCBP1
chr203072929930729339+3'-UTR,CDS,intron-Proximal3.601298.44435HepG2SND1
chr203075500830755045+3'-UTR3.261523.64832HepG2ZC3H11A
chr203075390230753955+3'-UTR4.5817716.96186HepG2AKAP1
chr203075383130753863+3'-UTR3.071295.70599HepG2IGF2BP1
chr203075376730753796+3'-UTR5.9005728.34308HepG2UPF1
chr203072929730729337+3'-UTR,CDS,intron-Proximal3.324964.00697HepG2ZNF800
chr203075358130753663+3'-UTR3.685739.09685HepG2RBM15
chr203075408530754144+3'-UTR4.9878029.16601HepG2UPF1
chr203075459330754668+3'-UTR5.9676831.05299HepG2UPF1
chr203075501830755056+3'-UTR4.993137.56405K562PUM2
chr203075357430753626+3'-UTR5.256108.76530K562UPF1
chr203072930130729365+3'-UTR,CDS,intron-Proximal3.841117.05173K562ZNF622
chr203075362030753668+3'-UTR4.117853.81597K562RBM15
chr203075471030754758+3'-UTR4.340389.52756HepG2IGF2BP3
chr203075451130754572+3'-UTR4.079548.99604K562UPF1
chr203075448230754511+3'-UTR3.207555.85073HepG2IGF2BP1
chr203075379630753881+3'-UTR6.2358560.11493HepG2UPF1
chr203075451430754564+3'-UTR4.5319921.77865HepG2IGF2BP1
chr203072928030729327+3'-UTR,CDS,intron-Proximal3.100693.33980HepG2SF3B4
chr203075388130754004+3'-UTR5.8722540.65010HepG2UPF1
chr203075403430754081+3'-UTR6.9649729.57620HepG2UPF1
chr203075427330754311+3'-UTR3.421517.22920HepG2IGF2BP1
chr203075345530753526+3'-UTR3.8511825.89770HepG2AKAP1
chr203075426530754307+3'-UTR4.3141918.89339HepG2AKAP1
chr203075334330753423+3'-UTR6.5283852.65079HepG2UPF1
chr203075335630753428+3'-UTR4.087326.73573K562PUM2
chr203072934530729464+3'-UTR,CDS3.688319.79481K562UCHL5
chr203075465530754758+3'-UTR3.9974017.96146HepG2IGF2BP1
chr203075402430754106+3'-UTR5.1854315.12816K562UPF1
chr203075421430754241+3'-UTR3.904935.58421HepG2IGF2BP3
chr203075341630753520+3'-UTR3.2866620.20331HepG2DDX55
chr203075363830753751+3'-UTR3.696628.50021K562YBX3
chr203075369330753758+3'-UTR3.8751014.32545HepG2AKAP1
chr203075425330754383+3'-UTR3.6407515.81687K562UPF1
chr203075403830754085+3'-UTR4.2355817.05951HepG2AKAP1
chr203075324730753287+3'-UTR3.636236.41974HepG2PPIG
chr203075427230754337+3'-UTR4.179294.29122K562IGF2BP2
chr203075430730754387+3'-UTR4.8938328.81916HepG2AKAP1
chr203075424630754359+3'-UTR5.0781937.08543HepG2UPF1
chr203075489330754928+3'-UTR3.532009.70384HepG2AKAP1
chr203075474430754805+3'-UTR5.3027229.69811HepG2UPF1
chr203075452030754545+3'-UTR3.827694.39142HepG2PCBP2
chr203075430630754430+3'-UTR3.2179812.14623HepG2PCBP2
chr203075403630754083+3'-UTR3.164455.14536HepG2LARP4
chr203069782130697974+5'-UTR,intron-Distal,intron-Proximal4.2670218.81276HepG2DDX59
chr203069753630697615+5'-UTR,CDS,intron-Proximal3.557105.89909HepG2NCBP2
chr203069764330697675+5'-UTR,intron-Distal,intron-Proximal3.638934.24164HepG2DDX59
chr203069755330697613+5'-UTR,CDS,intron-Proximal4.0624210.01959HepG2PRPF8
chr203074562730745683+CDS4.5987521.60868HepG2SND1
chr203073289330732923+CDS,intron-Proximal3.992397.26626HepG2PPIG
chr203072392830723975+CDS3.3558610.91532HepG2SND1
chr203073744030737509+CDS3.4987410.20649HepG2SND1
chr203073289030732963+CDS,intron-Proximal3.098706.73886K562ZNF622
chr203073863830738665+CDS3.5948811.37369HepG2SND1
chr203072394630723965+CDS4.406784.72754K562YBX3
chr203074788430747914+CDS4.419608.98365HepG2PPIG
chr203072965830729695+CDS3.9461513.12179HepG2SND1
chr203073299330733012+CDS4.638025.32461HepG2LIN28B
chr203073756530737611+CDS,intron-Proximal4.162816.58230HepG2AQR
chr203074568930745765+CDS3.0686116.05565HepG2RPS3
chr203074630630746358+CDS,intron-Proximal3.5575111.72614HepG2PRPF8
chr203073321130733227+CDS,intron-Proximal3.233453.49838K562SND1
chr203073737730737438+CDS,intron-Proximal3.363357.83535HepG2SF3A3
chr203073290630732997+CDS3.3099021.65563HepG2SND1
chr203073756830737618+CDS,intron-Proximal4.4291614.40440HepG2PRPF8
chr203073081230730887+CDS3.1095312.42002HepG2GRWD1
chr203073311330733179+CDS,intron-Proximal4.0276713.73278HepG2LIN28B
chr203074781430747896+CDS4.505857.95395K562SND1
chr203074559630745627+CDS,intron-Proximal3.6364811.99572HepG2SND1
chr203074290530742917+CDS,intron-Proximal4.750225.22159K562SND1
chr203073087130730910+CDS,intron-Proximal3.7681911.17337HepG2PPIG
chr203073842330738483+CDS,intron-Proximal3.0220111.63607HepG2RPS3
chr203073750930737545+CDS4.044877.78097HepG2SND1
chr203073864030738678+CDS4.118717.65378K562SND1
chr203072391430723946+CDS3.165183.24816K562YBX3
chr203073459530734647+CDS3.269543.81692HepG2LIN28B
chr203074569930745767+CDS3.7227019.60558HepG2SND1
chr203073747230737552+CDS3.717247.97040K562SND1
chr203074563830745756+CDS3.8914412.72649K562SND1
chr203073860330738679+CDS,intron-Proximal3.012669.26968HepG2PPIG
chr203073088230730908+CDS4.2362714.63258HepG2SND1
chr203074293230742989+CDS4.378978.87572K562SND1
chr203073308130733132+CDS,intron-Proximal4.2385011.04001HepG2BUD13
chr203072391430723974+CDS3.117364.30396K562UCHL5
chr203073460930734644+CDS3.238875.02495HepG2SND1
chr203074907830749096+CDS,intron-Proximal4.969376.76175HepG2PPIG
chr203073082230730882+CDS3.0482517.10387HepG2SND1
chr203074909630749139+CDS3.3302212.91840HepG2SND1
chr203074297530742989+CDS4.004359.53068HepG2SND1
chr203074291130742940+CDS3.025786.38739HepG2SND1
chr203072391630723975+CDS3.315479.81417HepG2GRWD1
chr203073312930733174+CDS3.7388710.34651HepG2SND1
chr203074559630745638+CDS,intron-Proximal3.384737.79897K562SND1
chr203073081330730872+CDS3.884004.66686K562DDX24
chr203073089330730905+CDS4.041143.53690K562ZNF622
chr203073866530738678+CDS3.758427.78097HepG2SND1
chr203074559830745656+CDS3.754799.66228HepG2RPS3
chr203073289330732906+CDS,intron-Proximal4.0633810.94304HepG2SND1
chr203073311330733184+CDS,intron-Proximal6.1011919.79638K562LIN28B
chr203073745630737535+CDS3.7195914.43052HepG2RPS3
chr203073864530738719+CDS,intron-Proximal4.4062114.90602HepG2PRPF8
chr203072392430723976+CDS3.719567.71102K562ZNF622
chr203073860430738638+CDS4.3551412.35307HepG2SND1
chr203070362930703703+intron-Distal4.267023.80060HepG2HNRNPC
chr203075115930751273+intron-Distal3.779343.00349HepG2ILF3
chr203075057330750688+intron-Distal4.128816.08171HepG2QKI
chr203069790630698010+intron-Distal,intron-Proximal5.2788327.24167HepG2PCBP2
chr203070158330701667+intron-Distal4.001897.31862HepG2HNRNPK
chr203074306230743166+intron-Distal,intron-Proximal3.316036.09990HepG2HNRNPK
chr203071660930716682+intron-Distal3.926443.34609K562TARDBP
chr203071385830713948+intron-Distal3.486018.25667HepG2HNRNPL
chr203069802130698100+intron-Distal4.423405.27483K562HNRNPK
chr203069814630698216+intron-Distal3.392629.50194HepG2PCBP2
chr203070420530704327+intron-Distal4.148709.93312HepG2HNRNPM
chr203069784930697906+intron-Distal,intron-Proximal3.485604.10487K562HNRNPK
chr203072116330721240+intron-Distal3.524603.30744K562PTBP1
chr203069785230697908+intron-Distal,intron-Proximal5.0004415.63441HepG2HNRNPK
chr203070255830702647+intron-Distal3.150683.68171HepG2SRSF1
chr203070292430702979+intron-Distal4.069603.68481HepG2HNRNPM
chr203071929330719414+intron-Distal3.882713.08314K562TARDBP
chr203072920830729280+intron-Distal,intron-Proximal3.455943.33980HepG2SF3B4
chr203069790830697980+intron-Distal,intron-Proximal5.7091229.60051HepG2HNRNPK
chr203069797430698034+intron-Distal4.629029.07358HepG2DDX59
chr203071394830714016+intron-Distal4.5795618.53363HepG2HNRNPL
chr203069804330698153+intron-Distal4.7098212.20956HepG2HNRNPK
chr203069790630698021+intron-Distal,intron-Proximal3.729208.98453K562HNRNPK
chr203072791330727965+intron-Distal3.327754.14346HepG2SUGP2
chr203071931330719402+intron-Distal4.516739.22151K562EIF4G2
chr203070261530702684+intron-Distal4.064406.29995HepG2HNRNPM
chr203073216030732294+intron-Distal4.097133.08314K562TARDBP
chr203069798030698043+intron-Distal3.476996.76916HepG2HNRNPK
chr203069816030698216+intron-Distal3.098593.00914HepG2PTBP1
chr203069785330697906+intron-Distal,intron-Proximal4.1057513.84781HepG2PCBP2
chr203071102830711126+intron-Distal5.074154.95161K562GTF2F1
chr203069810230698146+intron-Distal3.899368.80564HepG2PCBP2
chr203074791430747953+intron-Proximal4.548753.59236HepG2AQR
chr203074619330746251+intron-Proximal4.4821710.14692HepG2SF3B4
chr203074578130745809+intron-Proximal3.622406.95612HepG2PRPF8
chr203074577230745812+intron-Proximal4.956246.03362HepG2AQR
chr203074631730746351+intron-Proximal4.314013.93614HepG2AQR
chr203073870030738776+intron-Proximal3.512034.71970HepG2TIAL1
chr203073093430730988+intron-Proximal3.468186.48305HepG2EFTUD2
chr203072969830729746+intron-Proximal5.116075.26064K562AQR
chr203074300630743062+intron-Proximal4.316034.33022HepG2HNRNPK
chr203072971630729760+intron-Proximal3.743036.65114HepG2PRPF8
chr203072094730720987+intron-Proximal3.715074.83899HepG2PRPF8
chr203074770030747792+intron-Proximal3.959929.93297HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TM9SF4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TM9SF4 is not available on ENCORE database.

  • 75 RBPs can affect the levels of TM9SF4.  








The Knockdown/knockout RNA-Seq assay for TM9SF4 is not available on ENCORE database.





75 RBPs can affect the gene expression of TM9SF4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TM9SF4ENSG00000101337.114921.022006308.15020-0.358306.894505.74260HepG2AKAP8L
TM9SF4ENSG00000101337.116409.767607790.28900-0.281402.098501.41020HepG2ASCC1
TM9SF4ENSG00000101337.116363.023905416.974400.232101.876901.37550HepG2BOP1
TM9SF4ENSG00000101337.117333.136304973.049300.560208.148207.02070HepG2CPSF6
TM9SF4ENSG00000101337.119127.823307311.938900.3199010.029208.75730HepG2DAZAP1
TM9SF4ENSG00000101337.113932.762305806.92710-0.5622021.2569019.46480HepG2DDX19B
TM9SF4ENSG00000101337.114346.249505594.43650-0.364204.046303.24010HepG2DDX21
TM9SF4ENSG00000101337.117334.774109018.91480-0.298202.252401.68270HepG2DDX3X
TM9SF4ENSG00000101337.113241.373004534.70590-0.484404.846903.85690HepG2DDX55
TM9SF4ENSG00000101337.115039.654106007.09730-0.253304.256203.45130HepG2DKC1
TM9SF4ENSG00000101337.114400.845405713.31270-0.376503.676102.62510HepG2EEF2
TM9SF4ENSG00000101337.115420.146007447.77500-0.458504.725103.96190HepG2EIF2S1
TM9SF4ENSG00000101337.114391.208505284.26220-0.267102.778901.69400HepG2EIF3G
TM9SF4ENSG00000101337.113419.683808230.33250-1.2671025.3779023.48950HepG2EIF4A3
TM9SF4ENSG00000101337.115631.891108014.02180-0.508903.871803.06320HepG2EIF4B
TM9SF4ENSG00000101337.115923.517507214.33490-0.284404.927103.86180HepG2EIF4G1
TM9SF4ENSG00000101337.118285.258109310.48780-0.168302.549301.96840HepG2ETF1
TM9SF4ENSG00000101337.116634.472808207.60420-0.307002.325401.61580HepG2FIP1L1
TM9SF4ENSG00000101337.116627.783008305.07210-0.325502.709202.02540HepG2FXR1
TM9SF4ENSG00000101337.115201.823805994.35920-0.204602.923001.92320HepG2HDGF
TM9SF4ENSG00000101337.115850.978206720.24990-0.199802.509401.61420HepG2HNRNPA2B1
TM9SF4ENSG00000101337.113757.780005616.81490-0.579909.353308.14010HepG2HNRNPC
TM9SF4ENSG00000101337.117293.952006297.475300.211802.898402.16570HepG2HNRNPF
TM9SF4ENSG00000101337.117333.489205379.749400.446904.936404.12010HepG2HNRNPLL
TM9SF4ENSG00000101337.112201.046205661.97920-1.3631051.9674048.94140HepG2HNRNPM
TM9SF4ENSG00000101337.116403.638705699.432300.168003.186202.40490HepG2ILF2
TM9SF4ENSG00000101337.116388.821205739.507200.154502.502301.53070HepG2KIF1C
TM9SF4ENSG00000101337.115511.040808163.39970-0.566803.434002.50690HepG2LARP4
TM9SF4ENSG00000101337.114306.729805202.57740-0.272602.393501.34370HepG2LARP7
TM9SF4ENSG00000101337.116154.282808307.97610-0.432904.156403.35510HepG2MAGOH
TM9SF4ENSG00000101337.115050.404208354.31030-0.726109.489008.37910HepG2MATR3
TM9SF4ENSG00000101337.117372.704905577.025200.402604.886303.28090HepG2NAA15
TM9SF4ENSG00000101337.116166.279408550.96730-0.471704.710103.89630HepG2NCBP2
TM9SF4ENSG00000101337.114330.270706149.01810-0.505903.344402.20640HepG2PCBP2
TM9SF4ENSG00000101337.118932.067906748.211800.404409.856908.53050HepG2PRPF4
TM9SF4ENSG00000101337.114631.799706463.95710-0.480803.012301.74880HepG2PRPF6
TM9SF4ENSG00000101337.114754.621207949.14460-0.7415032.1120030.65840HepG2PTBP1
TM9SF4ENSG00000101337.115130.143206921.49090-0.432105.727204.91140HepG2PUF60
TM9SF4ENSG00000101337.113896.594508609.02310-1.1436051.7659049.72510HepG2QKI
TM9SF4ENSG00000101337.111945.662905933.35430-1.6086020.9787019.21380HepG2RAVER1
TM9SF4ENSG00000101337.114932.979707781.85270-0.6577020.2353019.09840HepG2RBM22
TM9SF4ENSG00000101337.114963.412507813.27840-0.6546013.7823012.34310HepG2RBM25
TM9SF4ENSG00000101337.115012.353006273.44870-0.323802.820201.81870HepG2RBM27
TM9SF4ENSG00000101337.113920.351805094.31580-0.377903.564102.35980HepG2RCC2
TM9SF4ENSG00000101337.114800.128808846.59700-0.8820045.5588043.96980HepG2NELFE
TM9SF4ENSG00000101337.115994.193908239.47120-0.4590013.6473012.43650HepG2RECQL
TM9SF4ENSG00000101337.113824.690005785.80990-0.597208.480507.13220HepG2RPS2
TM9SF4ENSG00000101337.114744.442506177.77870-0.380802.370201.62650HepG2RPS3A
TM9SF4ENSG00000101337.114430.692705906.02640-0.414704.403503.03290HepG2RPS5
TM9SF4ENSG00000101337.114126.176906456.59560-0.646004.936202.87880HepG2RTF1
TM9SF4ENSG00000101337.113580.116704529.10360-0.339202.966901.99080HepG2SERBP1
TM9SF4ENSG00000101337.116006.575207951.43560-0.404702.848802.16380HepG2SF3A3
TM9SF4ENSG00000101337.114284.432305324.84440-0.313602.900402.17760HepG2SF3B1
TM9SF4ENSG00000101337.115548.394308276.00420-0.5769020.7012019.33150HepG2SF3B4
TM9SF4ENSG00000101337.117899.020506637.139400.251006.053805.07930HepG2SLBP
TM9SF4ENSG00000101337.114293.231605794.45250-0.4326012.5820011.36540HepG2SMN1
TM9SF4ENSG00000101337.115623.952308638.38980-0.6192026.9154025.77140HepG2SRSF1
TM9SF4ENSG00000101337.116200.679307631.24340-0.299506.393505.67280HepG2SSB
TM9SF4ENSG00000101337.116786.396707772.18340-0.195703.266002.60160HepG2SUCLG1
TM9SF4ENSG00000101337.117711.736705540.920800.476807.091305.63600HepG2SUPT6H
TM9SF4ENSG00000101337.113196.647404513.95840-0.497805.306504.41790HepG2SUPV3L1
TM9SF4ENSG00000101337.116206.052905243.795500.243001.927201.30730HepG2TARDBP
TM9SF4ENSG00000101337.116929.937105470.185500.341203.511902.89290HepG2TRIM56
TM9SF4ENSG00000101337.117924.998106762.408100.228802.421101.60750HepG2TUFM
TM9SF4ENSG00000101337.115578.976007020.24400-0.331503.448502.75260HepG2U2AF1
TM9SF4ENSG00000101337.112004.971202666.34880-0.411303.866202.96990HepG2UCHL5
TM9SF4ENSG00000101337.115407.980406808.13880-0.332205.938005.11590HepG2UTP3
TM9SF4ENSG00000101337.114562.089806525.69610-0.516403.687102.46240HepG2XRCC6
TM9SF4ENSG00000101337.113426.977704443.50530-0.374803.807402.96620HepG2XRN2
TM9SF4ENSG00000101337.115496.834706659.73210-0.276906.688805.71930HepG2ZC3H8
TM9SF4ENSG00000101337.112873.218802505.453900.197502.454401.91420K562AGGF1
TM9SF4ENSG00000101337.111372.409201111.169500.304503.035402.20200K562EIF3G
TM9SF4ENSG00000101337.11828.288401279.89830-0.627804.814203.82180K562G3BP2
TM9SF4ENSG00000101337.111295.888701657.21660-0.354803.254202.61460K562HNRNPC
TM9SF4ENSG00000101337.11823.514501584.85720-0.9445012.6263010.25100K562HNRNPM
TM9SF4ENSG00000101337.112954.024102519.146600.229602.491601.92400K562RBM15
TM9SF4ENSG00000101337.112885.542701819.940600.664902.414001.32240K562SF1
TM9SF4ENSG00000101337.112674.201802292.007300.222402.306701.55640K562SF3A3
TM9SF4ENSG00000101337.111903.663001429.145900.413503.400402.35800K562TIAL1
TM9SF4ENSG00000101337.112046.679501518.127200.430904.532603.25480K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TM9SF4 is not available on ENCORE database.





8 RBPs can affect the splicing of TM9SF4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETM9SF4ENSG00000101337.11chr20+3072467930724800307238763072397630729343307294680.208000.001200.03644includedK562AKAP8L
SETM9SF4ENSG00000101337.11chr20+3073289330733012307307843073088030734587307346580.174000.001240.01688includedHepG2U2AF2
SETM9SF4ENSG00000101337.11chr20+307429053074298930738602307386783074559630745772-0.137000.000280.00582excludedK562PUS1
SETM9SF4ENSG00000101337.11chr20+307429053074298930738602307386783074559630745772-0.117000.001340.03415excludedK562RBM15
MXETM9SF4ENSG00000101337.11chr20+30720815307209293072387630723976306973083069755830729299307294680.162000.000160.022061includedK562LARP4
MXETM9SF4ENSG00000101337.11chr20+30720815307209293072387630723976306973083069755830729299307294680.118000.001390.022811includedK562DROSHA
MXETM9SF4ENSG00000101337.11chr20+3074290530742989307455963074577230738602307386783074625330746317-0.103000.006660.098692includedHepG2DDX55
MXETM9SF4ENSG00000101337.11chr20+30720815307209293072387630723976306973083069755830729299307294680.184000.000000.000001includedHepG2U2AF2
MXETM9SF4ENSG00000101337.11chr20+30720815307209293072387630723976306973083069755830729299307294680.117000.000290.007621includedHepG2HNRNPUL1
MXETM9SF4ENSG00000101337.11chr20+30720815307209293072387630723976306973083069755830729299307294680.116000.004290.058271includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TM9SF4 is not avaliable on ENCORE database.