TIMM8B

General Information

Gene Name       : TIMM8B
Gene ID             : ENSG00000150779.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIMM8B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIMM8BENSG00000150779.1116.6444.1930.41ENCSR000AEF
HepG2TIMM8BENSG00000150779.1171.5249.8560.69ENCSR985KAT
K562TIMM8BENSG00000150779.1175.7064.4170.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIMM8B is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIMM8B RNA is bound by 4 proteins.  







eCLIP assay for TIMM8B is not avaliable on ENCORE database.





4 proteins are bound to TIMM8B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11111956067111956129-3'-UTR,CDS,intron-Distal3.553264.37595HepG2LARP4
chr11111955962111956143-3'-UTR,CDS,intron-Distal4.081228.69423K562PUM2
chr11111955902111955977-3'-UTR,intron-Distal3.962265.80891HepG2LARP4
chr11111956063111956130-3'-UTR,CDS,intron-Distal4.382604.31428K562YBX3
chr11111957368111957463-5'-UTR,CDS,intron-Distal,intron-Proximal4.775195.35746HepG2DDX3X
chr11111957362111957461-5'-UTR,CDS,intron-Distal,intron-Proximal4.1796131.51626K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIMM8B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIMM8B is not available on ENCORE database.

  • 81 RBPs can affect the levels of TIMM8B.  








The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.





81 RBPs can affect the gene expression of TIMM8B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIMM8BENSG00000150779.7700.09980532.423600.394901.946201.49090HepG2AKAP1
TIMM8BENSG00000150779.7421.55360321.587600.390402.009601.34220HepG2AKAP8L
TIMM8BENSG00000150779.7836.53810440.521800.9251010.215108.77400HepG2ASCC1
TIMM8BENSG00000150779.7389.47990563.52830-0.532905.044804.16420HepG2AUH
TIMM8BENSG00000150779.7534.62210382.366500.483502.126601.30840HepG2BCCIP
TIMM8BENSG00000150779.7370.21740203.234100.865106.567705.69230HepG2BOP1
TIMM8BENSG00000150779.7667.06910418.530600.672405.477804.41090HepG2CIRBP
TIMM8BENSG00000150779.7435.57170320.012300.444703.483402.75250HepG2CKAP4
TIMM8BENSG00000150779.7369.43000189.041300.966505.399204.32810HepG2CNOT7
TIMM8BENSG00000150779.7530.76460416.549700.349502.430501.82040HepG2CELF1
TIMM8BENSG00000150779.7559.55940447.891900.321002.568101.84930HepG2DAZAP1
TIMM8BENSG00000150779.7127.59050252.10260-0.982506.552005.15400HepG2DDX24
TIMM8BENSG00000150779.7362.78820233.257400.637102.566001.58680HepG2DDX5
TIMM8BENSG00000150779.7164.10370438.16390-1.4169013.3858012.15070HepG2DDX6
TIMM8BENSG00000150779.7243.93610181.181900.429001.943301.34260HepG2DNAJC21
TIMM8BENSG00000150779.7304.21990198.711900.614302.800001.87380HepG2EEF2
TIMM8BENSG00000150779.7272.43890421.14740-0.628403.748003.06460HepG2EIF2S1
TIMM8BENSG00000150779.7152.44760465.38350-1.6101017.8474016.23560HepG2EIF4A3
TIMM8BENSG00000150779.7593.20290435.620000.445402.505101.86990HepG2G3BP1
TIMM8BENSG00000150779.7276.03830182.917600.593602.478301.86430HepG2HNRNPA1
TIMM8BENSG00000150779.7317.85890203.461800.643503.474802.70400HepG2HNRNPC
TIMM8BENSG00000150779.7308.12890201.841300.610203.059302.40190HepG2HNRNPLL
TIMM8BENSG00000150779.7319.28760202.116700.659604.977404.18440HepG2HNRNPU
TIMM8BENSG00000150779.7631.42170442.779000.511903.355202.61820HepG2IGF2BP2
TIMM8BENSG00000150779.7893.15750472.432400.918709.164008.06990HepG2MATR3
TIMM8BENSG00000150779.7578.02600423.960100.447103.057802.43660HepG2PUF60
TIMM8BENSG00000150779.7626.20800450.052800.476405.224104.46230HepG2PUM1
TIMM8BENSG00000150779.7385.26780540.80320-0.489203.802903.22050HepG2RBM22
TIMM8BENSG00000150779.7312.77140445.75630-0.511103.353802.61680HepG2RBM25
TIMM8BENSG00000150779.7520.75310325.338000.678602.339101.43570HepG2RBM27
TIMM8BENSG00000150779.7342.23060470.06930-0.457903.333102.66460HepG2RECQL
TIMM8BENSG00000150779.7236.92630156.962200.593902.728602.11670HepG2RPS19
TIMM8BENSG00000150779.7315.66920189.857600.733403.701502.77630HepG2RPS3A
TIMM8BENSG00000150779.7378.64360209.903600.851008.872807.82560HepG2SMN1
TIMM8BENSG00000150779.7603.07690492.829700.291201.853501.44400HepG2SRSF1
TIMM8BENSG00000150779.7527.51970418.599300.333602.311401.73280HepG2SRSF5
TIMM8BENSG00000150779.7793.22480530.294000.580807.593506.82540HepG2SSB
TIMM8BENSG00000150779.7734.90750476.062300.626308.666307.66790HepG2SUCLG1
TIMM8BENSG00000150779.7602.85930374.238400.687804.196503.38770HepG2SUPV3L1
TIMM8BENSG00000150779.7317.35130442.97800-0.481203.324502.71850HepG2TAF15
TIMM8BENSG00000150779.7251.69380407.03280-0.693505.588904.41400HepG2TIA1
TIMM8BENSG00000150779.7440.90620196.394901.166608.290507.50900HepG2TIAL1
TIMM8BENSG00000150779.7273.21430198.149700.463302.524201.98060HepG2TRIM56
TIMM8BENSG00000150779.7612.98580414.191700.565504.757403.57870HepG2TUFM
TIMM8BENSG00000150779.7340.95080221.055600.625103.402202.56510HepG2UCHL5
TIMM8BENSG00000150779.7345.77260266.912700.373402.128901.50300HepG2UPF1
TIMM8BENSG00000150779.7542.66630342.616300.663403.012601.96480HepG2UPF2
TIMM8BENSG00000150779.7442.94570257.695700.781406.847505.97670HepG2UTP3
TIMM8BENSG00000150779.7560.78980368.397500.606103.528902.71700HepG2XRN2
TIMM8BENSG00000150779.71514.155001104.767700.454702.938801.65850K562APOBEC3C
TIMM8BENSG00000150779.7870.832501140.96120-0.389802.033701.51490K562AQR
TIMM8BENSG00000150779.7193.27770332.21860-0.781504.829303.66550K562BOP1
TIMM8BENSG00000150779.7335.96330527.74050-0.651502.996001.88550K562CNOT7
TIMM8BENSG00000150779.7211.54830353.25750-0.739705.387704.30150K562CPSF6
TIMM8BENSG00000150779.71201.650601539.53040-0.357503.633702.51530K562CELF1
TIMM8BENSG00000150779.7340.30680484.93830-0.511003.665402.18060K562EXOSC5
TIMM8BENSG00000150779.7313.33250446.26200-0.510203.013701.34110K562FASTKD2
TIMM8BENSG00000150779.7203.51790359.40450-0.820505.729704.48940K562FMR1
TIMM8BENSG00000150779.7192.55350304.61620-0.661703.490102.45520K562FTO
TIMM8BENSG00000150779.7893.18500370.631601.2689017.6913016.27250K562FXR1
TIMM8BENSG00000150779.7222.70490337.28490-0.598803.398502.52090K562GPKOW
TIMM8BENSG00000150779.7570.27920760.62100-0.415503.340402.15950K562HNRNPA1
TIMM8BENSG00000150779.7312.04860493.90880-0.662503.256401.53490K562HNRNPAB
TIMM8BENSG00000150779.7274.07370406.30140-0.568003.617302.94610K562HNRNPC
TIMM8BENSG00000150779.7730.65160438.314900.737104.107102.95710K562HNRNPM
TIMM8BENSG00000150779.7309.56270481.80920-0.638202.757301.34010K562ILF2
TIMM8BENSG00000150779.7151.23880287.97050-0.929104.862703.58330K562KRR1
TIMM8BENSG00000150779.7622.38050478.603500.378902.628801.80930K562MAGOH
TIMM8BENSG00000150779.7613.77180477.593600.361802.442301.58070K562MATR3
TIMM8BENSG00000150779.7235.90250329.22310-0.480902.360301.55460K562METAP2
TIMM8BENSG00000150779.7419.17780604.86810-0.529105.892604.86050K562NSUN2
TIMM8BENSG00000150779.7423.97030616.84020-0.540903.533202.59320K562PCBP3
TIMM8BENSG00000150779.7617.63570833.50280-0.432402.929001.32710K562PKM
TIMM8BENSG00000150779.7814.30530604.945200.428703.250002.34860K562PPIG
TIMM8BENSG00000150779.7759.09550493.961200.619805.025704.01750K562PRPF8
TIMM8BENSG00000150779.7888.03900465.012300.9333014.9331013.45550K562PTBP1
TIMM8BENSG00000150779.7227.79570410.72930-0.850403.081001.43490K562RBM39
TIMM8BENSG00000150779.7698.71230503.087900.473802.773701.95630K562RPS19
TIMM8BENSG00000150779.7247.87570154.639500.680602.667401.68510K562RPS3
TIMM8BENSG00000150779.7413.78280596.83830-0.528505.294304.19280K562SF3A3
TIMM8BENSG00000150779.7168.16340320.72990-0.931505.826104.38190K562SF3B1
TIMM8BENSG00000150779.7262.36900383.02240-0.545803.096201.39960K562SND1
TIMM8BENSG00000150779.7672.57660455.895800.560904.044803.19590K562SRSF1
TIMM8BENSG00000150779.7364.82590519.18930-0.509104.506702.99220K562SRSF7
TIMM8BENSG00000150779.7299.18060430.29620-0.524302.646101.39950K562SSB
TIMM8BENSG00000150779.7241.21350419.43020-0.798102.924601.44590K562SUPT6H
TIMM8BENSG00000150779.7313.82400478.14110-0.607503.846702.63180K562SUPV3L1
TIMM8BENSG00000150779.7646.18390474.567100.445203.517702.59150K562SYNCRIP
TIMM8BENSG00000150779.71239.731001540.24650-0.313102.731801.34100K562UBE2L3
TIMM8BENSG00000150779.7343.46370506.11360-0.559303.780802.57360K562UCHL5
TIMM8BENSG00000150779.7478.08540641.35380-0.423904.058403.20410K562UPF1
TIMM8BENSG00000150779.7340.33990548.78730-0.689306.487905.11340K562WDR3
TIMM8BENSG00000150779.7758.142901285.51420-0.761805.583404.28560K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.





23 RBPs can affect the splicing of TIMM8B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.243000.000000.00000excludedK562SRSF1
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.126000.000090.01437includedHepG2DDX59
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.167000.000010.00163excludedHepG2TBRG4
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.126000.000150.01399excludedHepG2AKAP1
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.263000.000000.00000includedK562AQR
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.152000.000040.00306excludedK562FXR1
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.096000.000000.00031excludedHepG2SRSF7
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.160000.000000.00008excludedHepG2DDX3X
SETIMM8BENSG00000150779.7chr11-1119566901119570341119558721119561861119573631119574460.152000.000270.02718includedK562SUPV3L1
SETIMM8BENSG00000150779.7chr11-1119566901119570341119558721119561861119573631119574460.154000.000010.08504includedHepG2SDAD1
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.141000.000020.00314excludedHepG2NCBP2
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.179000.000000.00000excludedHepG2MATR3
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.321000.000150.01840includedHepG2DDX6
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.208000.000000.00000excludedHepG2SRSF1
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.193000.000120.01493includedK562HNRNPUL1
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.127000.000010.00306includedHepG2SUPV3L1
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.099000.001080.05093excludedHepG2PCBP1
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.096000.000090.03295excludedHepG2NOL12
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.176000.000040.00299includedK562UTP18
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.192000.000420.04954includedHepG2TAF15
SETIMM8BENSG00000150779.7chr11-1119566901119570341119558721119561861119573631119574460.107000.004910.09182includedK562AGGF1
SETIMM8BENSG00000150779.7chr11-1119566901119570341119558721119561861119573631119574460.106000.000000.00135includedHepG2DDX55
SETIMM8BENSG00000150779.7chr11-1119567011119570341119555231119561861119573631119575220.142000.000560.02722includedHepG2HNRNPU
SETIMM8BENSG00000150779.7chr11-111956701111957034111955523111956186111957363111957522-0.133000.000100.02497excludedK562EIF3G
SETIMM8BENSG00000150779.7chr11-1119566901119570341119558721119561861119573631119574460.152000.000020.02909includedHepG2NOLC1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TIMM8B is not avaliable on ENCORE database.