TIMM10B

General Information

Gene Name : TIMM10B
Gene ID : ENSG00000132286.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIMM10B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIMM10B	ENSG00000132286.11	22.81	22.39	22.60	ENCSR000AEF
HepG2	TIMM10B	ENSG00000132286.11	23.22	22.12	22.67	ENCSR985KAT
K562	TIMM10B	ENSG00000132286.11	34.73	38.35	36.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIMM10B is not avaliable on ENCORE database.

Proteins bound to RNA

TIMM10B RNA is bound by 27 proteins.

CanvasJS.com

eCLIP assay for TIMM10B is not avaliable on ENCORE database.

27 proteins are bound to TIMM10B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	6506810	6506913	+	intron-Distal	6.19845	86.97217	HepG2	SUGP2
chr11	6507440	6507513	+	intron-Distal	4.78997	45.04133	HepG2	SUGP2
chr11	6506136	6506272	+	intron-Distal	4.48483	42.32436	HepG2	SUGP2
chr11	6506759	6506810	+	intron-Distal	6.07293	36.58935	HepG2	SUGP2
chr11	6506506	6506599	+	intron-Distal	4.40087	31.67117	HepG2	SUGP2
chr11	6507231	6507301	+	intron-Distal	4.06217	28.65400	HepG2	SUGP2
chr11	6506331	6506396	+	intron-Distal	4.71269	27.95802	HepG2	SUGP2
chr11	6508011	6508076	+	intron-Distal	3.57434	23.22286	HepG2	SUGP2
chr11	6507836	6507903	+	intron-Distal	3.46834	23.05165	HepG2	SUGP2
chr11	6506396	6506504	+	intron-Distal	3.82626	22.81014	HepG2	SUGP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 132 entries

eCLIP assay for TIMM10B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIMM10B is not available on ENCORE database.
85 RBPs can affect the levels of TIMM10B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.

85 RBPs can affect the gene expression of TIMM10B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIMM10B	ENSG00000132286.7	2049.86240	979.77940	1.06490	40.68960	39.27230	HepG2	SSB
TIMM10B	ENSG00000132286.7	1882.08760	3586.99880	-0.93040	16.03660	14.11140	K562	CPSF6
TIMM10B	ENSG00000132286.7	2059.48640	1436.82450	0.51930	13.69540	12.71020	HepG2	ZNF622
TIMM10B	ENSG00000132286.7	3096.04960	2012.58210	0.62130	13.80540	12.47550	K562	RBM15
TIMM10B	ENSG00000132286.7	739.14420	1187.89740	-0.68450	12.32890	11.33740	HepG2	PTBP1
TIMM10B	ENSG00000132286.7	1718.70200	991.76530	0.79310	11.93990	10.69440	HepG2	RPLP0
TIMM10B	ENSG00000132286.7	854.08570	1322.03960	-0.63030	11.26740	10.31630	HepG2	NELFE
TIMM10B	ENSG00000132286.7	2453.67550	1566.00780	0.64780	9.52100	8.49580	HepG2	BOP1
TIMM10B	ENSG00000132286.7	2514.01640	1555.38710	0.69260	9.41840	8.33400	HepG2	HNRNPLL
TIMM10B	ENSG00000132286.7	3176.27180	2082.80950	0.60870	9.32900	8.04690	K562	AKAP8L
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 92 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.

2 RBPs can affect the splicing of TIMM10B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	TIMM10B	ENSG00000265264.1	chr11	+	6504069	6504230	6518419	6518561	6503274	6503519	6518814	6518897	0.38100	0.00248	0.06748	1included	HepG2	SF3A3
SE	TIMM10B	ENSG00000132286.7	chr11	+	6502986	6503082			6502676	6502785	6503274	6503361	-0.05200	0.00536	0.07329	excluded	K562	HNRNPC

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIMM10B

General Information

Functions

Localization

Domains (AlphaFold: TIMM10B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIMM10B is not avaliable on ENCORE database.

27 proteins are bound to TIMM10B RNA:

eCLIP assay for TIMM10B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.

85 RBPs can affect the gene expression of TIMM10B :

The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.

2 RBPs can affect the splicing of TIMM10B :

The Knockdown/knockout RNA-Seq assay for TIMM10B is not avaliable on ENCORE database.