TIMM10B

General Information

Gene Name       : TIMM10B
Gene ID             : ENSG00000132286.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIMM10B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIMM10BENSG00000132286.1122.8122.3922.60ENCSR000AEF
HepG2TIMM10BENSG00000132286.1123.2222.1222.67ENCSR985KAT
K562TIMM10BENSG00000132286.1134.7338.3536.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIMM10B is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIMM10B RNA is bound by 27 proteins.  







eCLIP assay for TIMM10B is not avaliable on ENCORE database.





27 proteins are bound to TIMM10B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1165052086505271+3'-UTR,intron-Distal3.104407.03308K562IGF2BP1
chr1165046606504730+3'-UTR,intron-Distal3.799786.71645HepG2PTBP1
chr1165188416518888+3'-UTR,5'-UTR,intron-Distal4.223453.79199HepG2PPIG
chr1165048756504942+3'-UTR,intron-Distal4.393324.58231HepG2HNRNPK
chr1165047716504828+3'-UTR,intron-Distal3.945183.39506K562IGF2BP2
chr1165059056505990+3'-UTR,intron-Distal,polyA_site4.214654.27913HepG2CSTF2
chr1165239596524048+3'-UTR,CDS,intron-Proximal4.018948.05213K562U2AF2
chr1165034606503566+3'-UTR,5'-UTR,intron-Proximal3.2260111.96981K562UCHL5
chr1165240456524106+3'-UTR,CDS3.691536.97808HepG2BCLAF1
chr1165037966503832+3'-UTR,intron-Distal3.977284.73972K562PUM2
chr1165241006524157+3'-UTR,CDS,intron-Proximal4.942157.06060HepG2PPIG
chr1165240586524114+3'-UTR,CDS3.350444.05781K562DDX24
chr1165046896504737+3'-UTR,intron-Distal3.043584.40029K562PTBP1
chr1165034486503538+3'-UTR,5'-UTR,intron-Proximal5.341327.13530K562SRSF1
chr1165239786524045+3'-UTR,CDS,intron-Proximal3.385595.79905HepG2BCLAF1
chr1165042526504306+3'-UTR,intron-Distal3.394927.56541HepG2SUGP2
chr1165034276503475+3'-UTR,5'-UTR,CDS4.483994.28220HepG2GRWD1
chr1165301086530166+3'-UTR,CDS,intron-Proximal4.455734.46002K562DDX24
chr1165040736504170+3'-UTR,intron-Distal3.438054.00430HepG2UPF1
chr1165056866505782+3'-UTR,intron-Distal3.2766611.42938HepG2SUGP2
chr1165241146524156+3'-UTR,CDS3.591524.14015K562DDX24
chr1165040416504118+3'-UTR,intron-Distal,intron-Proximal3.3621415.19989K562UPF1
chr1165041186504168+3'-UTR,intron-Distal3.8786610.31199K562UPF1
chr1165239686524036+3'-UTR,CDS,intron-Proximal3.861804.50825K562DDX24
chr1165240566524112+3'-UTR,CDS3.296434.06531HepG2GRWD1
chr1165044896504732+3'-UTR,intron-Distal3.2220013.22591K562MATR3
chr1165057826505881+3'-UTR,intron-Distal3.1759212.04114HepG2SUGP2
chr1165239656524013+3'-UTR,CDS,intron-Proximal5.288086.50173HepG2U2AF2
chr1165239766524070+3'-UTR,CDS,intron-Proximal3.923926.98305HepG2PPIG
chr1165042466504359+3'-UTR,intron-Distal3.057593.55901K562FUS
chr1165027256502786+5'-UTR,CDS,intron-Proximal3.849589.36971HepG2NCBP2
chr1165027376502784+5'-UTR,CDS5.202895.39850K562DDX3X
chr1165033686503427+CDS5.093286.78401HepG2GRWD1
chr1165030716503083+CDS,intron-Distal,intron-Proximal3.381208.54450HepG2PPIG
chr1165032726503284+CDS,intron-Proximal3.951054.13112K562SRSF1
chr1165030176503071+CDS,intron-Distal4.1942513.54837HepG2PPIG
chr1165032846503346+CDS4.301735.97159K562SRSF1
chr1165030606503082+CDS,intron-Distal4.223146.77282K562SRSF1
chr1165030006503060+CDS,intron-Distal3.910564.39088K562SRSF1
chr1165032746503286+CDS,intron-Proximal3.103907.83839HepG2PPIG
chr1165029976503059+CDS,intron-Distal3.451296.49271HepG2GRWD1
chr1165033716503434+CDS3.285613.84330HepG2SRSF7
chr1165083266508404+intron-Distal3.5577215.89541K562PTBP1
chr1165077556507833+intron-Distal5.2265014.81659HepG2MATR3
chr1165242286524394+intron-Distal,intron-Proximal4.668267.88692HepG2PTBP1
chr1165077536507880+intron-Distal3.8796115.82382K562MATR3
chr1165074416507495+intron-Distal3.697539.93088K562HNRNPL
chr1165072046507272+intron-Distal4.9544819.72004K562MATR3
chr1165066546506711+intron-Distal4.3377212.84845K562MATR3
chr1165199926520068+CDS,intron-Distal3.483073.63043HepG2GRWD1
chr1165071486507179+intron-Distal3.283677.61954K562HNRNPL
chr1165084446508474+intron-Distal4.699634.07628HepG2PTBP1
chr1165061026506143+intron-Distal4.833594.30178K562PTBP1
chr1165065376506596+intron-Distal6.0273216.53248K562MATR3
chr1165067916506841+intron-Distal5.8239615.04084K562MATR3
chr1165059236505974+intron-Distal4.011864.04407K562HNRNPL
chr1165183246518406+intron-Distal3.365803.70624HepG2HNRNPK
chr1165185506518687+5'-UTR,intron-Distal,intron-Proximal3.249137.06471HepG2HNRNPK
chr1165071146507179+intron-Distal3.408739.71200HepG2HNRNPL
chr1165190536519137+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.192363.13759K562XRN2
chr1165083296508378+intron-Distal4.198196.16211K562MATR3
chr1165077576507786+intron-Distal3.015643.26015K562PTBP1
chr1165071796507202+intron-Distal3.8467210.13874K562HNRNPL
chr1165092806509350+intron-Distal3.330425.61622HepG2QKI
chr1165060656506149+intron-Distal3.931205.02896K562HNRNPK
chr1165060226506043+intron-Distal3.7072510.93835HepG2SUGP2
chr1165066286506654+intron-Distal4.591898.71608HepG2MATR3
chr1165192846519336+3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.620714.29246HepG2SF3B4
chr1165201116520197+CDS,intron-Distal,intron-Proximal3.513427.36645HepG2PPIG
chr1165061366506272+intron-Distal4.4848342.32436HepG2SUGP2
chr1165071836507204+intron-Distal5.1110817.65239K562MATR3
chr1165079036507951+intron-Distal4.0812218.28278HepG2SUGP2
chr1165060976506134+intron-Distal4.303594.03269HepG2PTBP1
chr1165073946507441+intron-Distal3.146937.24951K562HNRNPL
chr1165066806506735+intron-Distal3.614803.00914HepG2PTBP1
chr1165065996506660+intron-Distal4.0727819.72997HepG2SUGP2
chr1165080136508072+intron-Distal4.185953.97489K562TIA1
chr1165199296520159+CDS,intron-Distal,intron-Proximal3.455794.49614K562SRSF1
chr1165072056507283+intron-Distal6.4445114.06081HepG2MATR3
chr1165064496506504+intron-Distal4.362386.12189K562PTBP1
chr1165066796506741+intron-Distal3.9676519.32592HepG2SUGP2
chr1165065066506599+intron-Distal4.4008731.67117HepG2SUGP2
chr1165073516507406+intron-Distal4.0415010.04234K562MATR3
chr1165073966507445+intron-Distal3.175145.48447HepG2MATR3
chr1165068106506913+intron-Distal6.1984586.97217HepG2SUGP2
chr1165077716507836+intron-Distal3.1650821.43893HepG2SUGP2
chr1165070456507205+intron-Distal3.5139518.28927HepG2MATR3
chr1165080116508076+intron-Distal3.5743423.22286HepG2SUGP2
chr1165142126514363+intron-Distal3.909814.70908HepG2QKI
chr1165078016507843+intron-Distal3.771126.84523K562PTBP1
chr1165074066507496+intron-Distal4.9376421.45769K562MATR3
chr1165076276507737+intron-Distal5.0457620.58811K562MATR3
chr1165073356507415+intron-Distal3.780459.19851HepG2HNRNPL
chr1165065506506614+intron-Distal3.798749.72356HepG2MATR3
chr1165074456507488+intron-Distal3.113776.31479HepG2MATR3
chr1165061026506125+intron-Distal4.885174.66737HepG2MATR3
chr1165073986507440+intron-Distal4.2042119.21458HepG2SUGP2
chr1165074406507513+intron-Distal4.7899745.04133HepG2SUGP2
chr1165063316506396+intron-Distal4.7126927.95802HepG2SUGP2
chr1165075616507596+intron-Distal4.839815.90588K562MATR3
chr1165075176507599+intron-Distal4.6392410.29297HepG2MATR3
chr1165185976518723+intron-Distal,intron-Proximal3.098384.81420K562HNRNPK
chr1165067316506802+intron-Distal4.027938.27898K562PTBP1
chr1165080126508071+intron-Distal4.7153713.27938K562MATR3
chr1165084316508476+intron-Distal3.961844.22415K562PTBP1
chr1165071806507200+intron-Distal3.9225520.07738HepG2SUGP2
chr1165080766508152+intron-Distal3.7744021.41723HepG2SUGP2
chr1165076426507734+intron-Distal3.3344621.57157HepG2SUGP2
chr1165083206508425+intron-Distal3.306678.76339HepG2PTBP1
chr1165067596506810+intron-Distal6.0729336.58935HepG2SUGP2
chr1165067116506791+intron-Distal4.7485519.14222K562MATR3
chr1165071796507261+intron-Distal4.322438.49676HepG2HNRNPL
chr1165078366507903+intron-Distal3.4683423.05165HepG2SUGP2
chr1165075676507600+intron-Distal4.0937213.14447HepG2SUGP2
chr1165082026508276+intron-Distal3.6462217.66138HepG2SUGP2
chr1165071426507183+intron-Distal4.3682812.00192K562MATR3
chr1165072006507231+intron-Distal3.5948322.69114HepG2SUGP2
chr1165065286506598+intron-Distal3.559074.21971K562TIA1
chr1165072316507301+intron-Distal4.0621728.65400HepG2SUGP2
chr1165067436506820+intron-Distal5.8730519.44015HepG2MATR3
chr1165065966506652+intron-Distal5.2162016.77412K562MATR3
chr1165299746530056+intron-Distal,intron-Proximal3.693543.97268K562PTBP1
chr1165299816530052+intron-Distal,intron-Proximal3.633073.59803HepG2PTBP1
chr1165074966507546+intron-Distal5.7045210.58856K562MATR3
chr1165070796507141+intron-Distal3.1619122.66162HepG2SUGP2
chr1165063966506504+intron-Distal3.8262622.81014HepG2SUGP2
chr1165111676511254+intron-Distal3.870246.58307HepG2HNRNPC
chr1165059186505952+intron-Distal4.2477812.76219HepG2SUGP2
chr1165067416506759+intron-Distal4.9128315.24958HepG2SUGP2
chr1165075136507559+intron-Distal3.6576415.62118HepG2SUGP2
chr1165071416507180+intron-Distal3.1618314.16948HepG2SUGP2
chr1165186036518724+intron-Distal,intron-Proximal3.722719.00665HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIMM10B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIMM10B is not available on ENCORE database.

  • 85 RBPs can affect the levels of TIMM10B.  








The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.





85 RBPs can affect the gene expression of TIMM10B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIMM10BENSG00000132286.7980.055901469.32920-0.584203.520802.92990HepG2AKAP1
TIMM10BENSG00000132286.71218.494001041.144100.226802.136001.51890HepG2AUH
TIMM10BENSG00000132286.72453.675501566.007800.647809.521008.49580HepG2BOP1
TIMM10BENSG00000132286.71573.079301054.576600.576803.926303.03060HepG2CALR
TIMM10BENSG00000132286.7948.279701281.06910-0.434002.584601.64580HepG2CCAR1
TIMM10BENSG00000132286.7933.79600672.255300.474002.241501.55820HepG2CNOT7
TIMM10BENSG00000132286.7281.29890415.14840-0.561503.616002.40010HepG2CSTF2
TIMM10BENSG00000132286.71132.69870894.794500.340004.013103.14650HepG2DAZAP1
TIMM10BENSG00000132286.7627.16450780.38980-0.315403.161402.27500HepG2DDX19B
TIMM10BENSG00000132286.71443.507501100.934900.390703.132902.06390HepG2DDX5
TIMM10BENSG00000132286.7800.946301208.88580-0.593904.012003.27940HepG2DDX6
TIMM10BENSG00000132286.7758.26160566.239700.421203.142002.09960HepG2DHX30
TIMM10BENSG00000132286.71193.02430807.305000.563308.956407.87590HepG2DKC1
TIMM10BENSG00000132286.7828.239301162.43000-0.489002.776902.18240HepG2EIF2S1
TIMM10BENSG00000132286.7950.773801250.62440-0.395501.882201.30690HepG2EIF4B
TIMM10BENSG00000132286.7948.616901307.36810-0.462803.080502.27260HepG2FIP1L1
TIMM10BENSG00000132286.7750.29430550.067500.447702.600801.36640HepG2FKBP4
TIMM10BENSG00000132286.72668.072401440.109500.889504.481403.19730HepG2FTO
TIMM10BENSG00000132286.7925.492301295.83800-0.485602.962102.24520HepG2FXR1
TIMM10BENSG00000132286.7920.75510592.720500.635404.661003.85190HepG2HNRNPA1
TIMM10BENSG00000132286.7994.88880822.302300.274802.280801.42420HepG2HNRNPA2B1
TIMM10BENSG00000132286.71132.47670920.659900.298603.082002.32780HepG2HNRNPF
TIMM10BENSG00000132286.7599.72880815.11410-0.442705.679404.74420HepG2HNRNPL
TIMM10BENSG00000132286.72514.016401555.387100.692609.418408.33400HepG2HNRNPLL
TIMM10BENSG00000132286.7784.70920654.914100.260802.012801.48580HepG2HNRNPU
TIMM10BENSG00000132286.71090.951101473.93660-0.434102.667201.46260HepG2HSPD1
TIMM10BENSG00000132286.71815.791901222.203500.571005.943104.99020HepG2IGF2BP2
TIMM10BENSG00000132286.72054.238301352.064800.603305.029203.89610HepG2LARP4
TIMM10BENSG00000132286.71637.544001303.614800.328902.005001.46340HepG2MATR3
TIMM10BENSG00000132286.71150.35750888.502900.372503.098601.81070HepG2NAA15
TIMM10BENSG00000132286.72010.691301379.083200.543906.111905.02610HepG2NSUN2
TIMM10BENSG00000132286.71229.96930880.935400.481404.589003.61910HepG2PRPF4
TIMM10BENSG00000132286.7739.144201187.89740-0.6845012.3289011.33740HepG2PTBP1
TIMM10BENSG00000132286.71044.68860846.956100.302602.032301.50910HepG2PUF60
TIMM10BENSG00000132286.7677.90360859.49600-0.342403.532702.85510HepG2PUS1
TIMM10BENSG00000132286.71422.03630999.092000.509207.241606.49510HepG2RBM22
TIMM10BENSG00000132286.7854.085701322.03960-0.6303011.2674010.31630HepG2NELFE
TIMM10BENSG00000132286.7855.225401231.25710-0.525808.200807.22340HepG2RECQL
TIMM10BENSG00000132286.71718.70200991.765300.7931011.9399010.69440HepG2RPLP0
TIMM10BENSG00000132286.7973.88560713.485100.448802.218001.37120HepG2RPS10
TIMM10BENSG00000132286.7819.32500611.491800.422003.422602.74810HepG2RPS19
TIMM10BENSG00000132286.7885.80380641.989900.464303.663702.74740HepG2RPS2
TIMM10BENSG00000132286.7899.07470674.827100.413802.140301.43620HepG2RPS3A
TIMM10BENSG00000132286.71030.856901236.80590-0.262802.575602.00100HepG2SF3B4
TIMM10BENSG00000132286.71000.13790812.044200.300503.056502.32360HepG2SLBP
TIMM10BENSG00000132286.7822.86910680.179500.274602.521801.90330HepG2SMN1
TIMM10BENSG00000132286.71116.308501656.44400-0.569404.489003.18530HepG2SRSF3
TIMM10BENSG00000132286.71011.37280836.213900.274302.402701.81490HepG2SRSF5
TIMM10BENSG00000132286.71140.24090904.515400.334003.717802.92810HepG2SRSF7
TIMM10BENSG00000132286.7801.220401050.22770-0.390404.990604.28950HepG2SRSF9
TIMM10BENSG00000132286.72049.86240979.779401.0649040.6896039.27230HepG2SSB
TIMM10BENSG00000132286.71134.92940882.817300.362303.130502.13680HepG2SUPT6H
TIMM10BENSG00000132286.7905.17030657.875100.460302.697902.02820HepG2SUPV3L1
TIMM10BENSG00000132286.7846.505701160.28600-0.454905.766405.00770HepG2TAF15
TIMM10BENSG00000132286.72127.442701515.783700.489005.351804.39110HepG2TARDBP
TIMM10BENSG00000132286.7979.30460636.449100.621603.231902.69820HepG2TIAL1
TIMM10BENSG00000132286.7923.02700642.055100.523604.329303.65520HepG2TRIM56
TIMM10BENSG00000132286.71454.276301261.308000.205301.863401.35110HepG2UTP3
TIMM10BENSG00000132286.72059.486401436.824500.5193013.6954012.71020HepG2ZNF622
TIMM10BENSG00000132286.72362.343702001.642600.238903.051302.45930K562AGGF1
TIMM10BENSG00000132286.73176.271802082.809500.608709.329008.04690K562AKAP8L
TIMM10BENSG00000132286.72268.519902937.38960-0.372804.053402.50180K562APOBEC3C
TIMM10BENSG00000132286.72678.203102185.387000.293303.674802.61060K562ATP5C1
TIMM10BENSG00000132286.71540.660201238.483300.314902.267001.32970K562CCAR1
TIMM10BENSG00000132286.72643.540503186.93890-0.269703.674302.39170K562CPEB4
TIMM10BENSG00000132286.71882.087603586.99880-0.9304016.0366014.11140K562CPSF6
TIMM10BENSG00000132286.7870.518401099.59230-0.337003.238302.08490K562CSTF2
TIMM10BENSG00000132286.72683.426603297.84500-0.297404.557903.74870K562DDX47
TIMM10BENSG00000132286.71335.343001845.00230-0.466407.390106.29660K562EIF2S2
TIMM10BENSG00000132286.7919.720901216.87210-0.403902.507601.52880K562EIF3D
TIMM10BENSG00000132286.72466.862603328.96140-0.432407.981006.40330K562EIF4G2
TIMM10BENSG00000132286.72455.171703093.16980-0.333302.526201.65640K562FTO
TIMM10BENSG00000132286.72054.705301582.633600.376502.218701.59620K562G3BP2
TIMM10BENSG00000132286.71196.806501777.27880-0.570507.559506.61940K562HNRNPC
TIMM10BENSG00000132286.72223.636602980.31500-0.422505.197703.69600K562HNRNPL
TIMM10BENSG00000132286.72380.359603858.19550-0.696702.687901.90390K562HSPD1
TIMM10BENSG00000132286.72837.926602210.347400.360503.588402.63380K562KIF1C
TIMM10BENSG00000132286.73060.011902476.152100.305303.030802.07050K562MBNL1
TIMM10BENSG00000132286.72384.529503342.93840-0.487402.920202.01890K562METAP2
TIMM10BENSG00000132286.72908.455801735.606300.744703.233402.26480K562NAA15
TIMM10BENSG00000132286.71969.210802449.78950-0.315002.181201.44260K562PCBP3
TIMM10BENSG00000132286.73280.961703785.29890-0.206302.321901.44150K562PUM2
TIMM10BENSG00000132286.72179.962001510.005600.529602.978901.49740K562RAVER1
TIMM10BENSG00000132286.73096.049602012.582100.6213013.8054012.47550K562RBM15
TIMM10BENSG00000132286.71906.254101501.049400.344703.230201.78590K562RBM25
TIMM10BENSG00000132286.71864.251002652.03020-0.508504.340703.05140K562RPS3
TIMM10BENSG00000132286.72137.402802560.42750-0.260502.262301.32910K562SRSF4
TIMM10BENSG00000132286.71228.516201495.76690-0.284002.366401.61650K562TIA1
TIMM10BENSG00000132286.72083.760701627.986600.356003.301502.24910K562TRIM56
TIMM10BENSG00000132286.72256.076101533.994800.556405.241703.63840K562U2AF1
TIMM10BENSG00000132286.72093.239701584.312700.401804.993503.91590K562U2AF2
TIMM10BENSG00000132286.72263.744602753.53130-0.282602.272601.61740K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIMM10B is not available on ENCORE database.





2 RBPs can affect the splicing of TIMM10B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETIMM10BENSG00000132286.7chr11+650298665030826502676650278565032746503361-0.052000.005360.07329excludedK562HNRNPC
MXETIMM10BENSG00000265264.1chr11+650406965042306518419651856165032746503519651881465188970.381000.002480.067481includedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TIMM10B is not avaliable on ENCORE database.