THRA

General Information

Gene Name       : THRA
Gene ID             : ENSG00000126351.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: THRA)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878THRAENSG00000126351.120.730.710.72ENCSR000AEF
HepG2THRAENSG00000126351.1214.057.4110.73ENCSR985KAT
K562THRAENSG00000126351.1215.6213.2714.45ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for THRA is not avaliable on ENCORE database.



Proteins bound to RNA
  • THRA RNA is bound by 17 proteins.  







eCLIP assay for THRA is not avaliable on ENCORE database.





17 proteins are bound to THRA RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173824710138247198+3'-UTR,intron-Distal4.9461817.86397K562AGGF1
chr173824688238246971+3'-UTR,intron-Distal6.2415914.85979K562AKAP1
chr173824796638248012+3'-UTR,intron-Distal3.522444.03740HepG2PCBP2
chr173824863838248728+3'-UTR,intron-Distal4.641879.12746K562FAM120A
chr173824726238247337+3'-UTR,intron-Distal3.271875.81579HepG2RBFOX2
chr173824736438247416+3'-UTR,intron-Distal5.3686016.39973K562AGGF1
chr173824865038248739+3'-UTR,intron-Distal4.267886.27044K562DDX6
chr173824780738247877+3'-UTR,intron-Distal4.143276.68057HepG2PCBP2
chr173824737538247417+3'-UTR,intron-Distal3.688683.37631K562HNRNPL
chr173824711038247223+3'-UTR,intron-Distal4.658216.52213HepG2UPF1
chr173824770638247729+3'-UTR,intron-Distal4.7864011.44087K562AGGF1
chr173824656038246607+3'-UTR,intron-Distal5.296294.97123HepG2PCBP2
chr173824765038247675+3'-UTR,intron-Distal3.960418.62096K562UPF1
chr173824715538247212+3'-UTR,intron-Distal3.7490612.88200K562UPF1
chr173824667538246767+3'-UTR,intron-Distal4.331705.76537HepG2PCBP2
chr173824775838247825+3'-UTR,intron-Distal4.9081114.82181K562UPF1
chr173824803138248081+3'-UTR,intron-Distal4.268428.10043K562AGGF1
chr173824723338247329+3'-UTR,intron-Distal4.235093.28836HepG2GRSF1
chr173824687038246948+3'-UTR,intron-Distal3.046153.87462HepG2PCBP2
chr173824687738247028+3'-UTR,intron-Distal4.9289839.10418K562UPF1
chr173823065638230778+3'-UTR,5'-UTR,CDS3.698833.14999HepG2GRWD1
chr173824777338247907+3'-UTR,intron-Distal3.335065.61667K562ILF3
chr173824639838246471+3'-UTR,intron-Distal4.024845.97891K562FAM120A
chr173824795938247988+3'-UTR,intron-Distal5.068835.15256K562AKAP1
chr173824704938247108+3'-UTR,intron-Distal5.0888822.85387K562UPF1
chr173824785138247900+3'-UTR,intron-Distal4.5716114.13271K562UPF1
chr173823064038230776+3'-UTR,5'-UTR,CDS4.289888.97908HepG2DDX3X
chr173824638538246475+3'-UTR,intron-Distal5.8853925.37700K562UPF1
chr173824739238247442+3'-UTR,intron-Distal5.8150238.27544K562UPF1
chr173824688438246941+3'-UTR,intron-Distal3.610964.34776K562ILF3
chr173824717438247204+3'-UTR,intron-Distal3.587094.21801K562AKAP1
chr173824660938246706+3'-UTR,intron-Distal4.4645411.21371K562AKAP1
chr173824864238248738+3'-UTR,intron-Distal7.3031634.94350K562UPF1
chr173824654538246635+3'-UTR,intron-Distal4.0415119.83995K562UPF1
chr173824710838247155+3'-UTR,intron-Distal4.1949814.86163K562UPF1
chr173824863938248718+3'-UTR,intron-Distal4.154385.98771K562GTF2F1
chr173824862938248717+3'-UTR,intron-Distal5.083476.17526K562ZC3H11A
chr173824769338247748+3'-UTR,intron-Distal3.730314.66555K562FAM120A
chr173824760838247704+3'-UTR,intron-Distal3.322566.71144HepG2RBFOX2
chr173824801938248088+3'-UTR,intron-Distal4.2001715.93319K562UPF1
chr173824769138247748+3'-UTR,intron-Distal3.9138518.79689K562UPF1
chr173824876338248808+3'-UTR,intron-Distal5.2569016.18694K562UPF1
chr173824780738247850+3'-UTR,intron-Distal4.051906.08868K562AKAP1
chr173824738138247392+3'-UTR,intron-Distal6.9034828.35864K562UPF1
chr173824738038247432+3'-UTR,intron-Distal4.797135.84281K562GTF2F1
chr173824688138246976+3'-UTR,intron-Distal3.3938111.85428K562AGGF1
chr173824711238247174+3'-UTR,intron-Distal5.9870810.17460K562AKAP1
chr173824863938248713+3'-UTR,intron-Distal3.196374.73673K562CSTF2T
chr173824723838247312+3'-UTR,intron-Distal5.3226714.77591K562UPF1
chr173824446738244503+CDS,intron-Proximal6.0824314.76922K562AGGF1
chr173824310038243172+CDS,intron-Proximal4.693606.76480K562HNRNPL
chr173824445538244496+CDS,intron-Proximal3.882133.60879K562HNRNPL
chr173824332738243398+intron-Distal5.238196.64534HepG2HNRNPL
chr173822061338220665+intron-Distal3.727453.19026HepG2HNRNPL
chr173824418738244218+intron-Distal4.656625.60352K562HNRNPL
chr173824419338244223+intron-Distal5.442387.43302K562AGGF1
chr173824365438243745+intron-Distal4.087884.99833K562AKAP8L
chr173824325638243342+intron-Distal6.7827940.85399K562AGGF1
chr173824375538243858+intron-Distal5.008155.24346HepG2AGGF1
chr173824387738243960+intron-Distal5.083179.75957K562HNRNPL
chr173824368338243755+intron-Distal5.2502010.13505HepG2AGGF1
chr173824376838243868+intron-Distal4.4623310.27049K562HNRNPL
chr173824341638243518+intron-Distal3.529263.76863HepG2AGGF1
chr173823271138232784+intron-Distal3.955076.70492K562RBFOX2
chr173824507538245235+intron-Distal3.997313.57018HepG2HNRNPK
chr173824312138243211+intron-Distal,intron-Proximal7.4751739.53558K562AGGF1
chr173822132938221421+intron-Distal3.165253.73797K562CSTF2T
chr173822613438226187+intron-Distal3.989833.80314K562CSTF2T
chr173823250438232555+intron-Distal3.223344.81973K562RBFOX2
chr173824323638243308+intron-Distal4.784797.01052K562HNRNPL
chr173823256238232607+intron-Distal3.718104.75857K562RBFOX2
chr173824319238243315+intron-Distal,intron-Proximal4.1817212.93569HepG2AGGF1
chr173824321638243327+intron-Distal6.2593414.71445HepG2HNRNPL
chr173824355938243693+intron-Distal4.5008012.35294HepG2HNRNPL
chr173824369238243757+intron-Distal3.631603.40713K562HNRNPL
chr173823224838232327+intron-Distal5.5288511.53232K562RBFOX2
chr173824333038243416+intron-Distal5.013194.36205HepG2AGGF1
chr173822599338226091+intron-Distal4.319313.80314K562CSTF2T
chr173824375838243854+intron-Distal8.0919455.53681K562AGGF1
chr173822015738220268+intron-Distal4.140794.49655K562CSTF2T
chr173824366938243754+intron-Distal8.0788951.29695K562AGGF1
chr173824402538244060+intron-Distal4.903048.77893K562AGGF1
chr173824505238245146+intron-Distal4.839945.68967HepG2PCBP2
chr173824421838244223+intron-Distal4.355894.04407K562HNRNPL
chr173824369338243743+intron-Distal5.3460810.00393HepG2HNRNPL
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for THRA is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for THRA is not available on ENCORE database.

  • 86 RBPs can affect the levels of THRA.  








The Knockdown/knockout RNA-Seq assay for THRA is not available on ENCORE database.





86 RBPs can affect the gene expression of THRA :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
THRAENSG00000126351.8386.94110629.76780-0.702709.634608.63980HepG2ACO1
THRAENSG00000126351.8610.393701016.31110-0.735506.313905.54740HepG2AKAP1
THRAENSG00000126351.8469.56110632.77850-0.430404.008403.09770HepG2AKAP8L
THRAENSG00000126351.8541.27880840.89040-0.635505.378604.30080HepG2ASCC1
THRAENSG00000126351.8694.63870873.22370-0.330103.172202.44430HepG2AUH
THRAENSG00000126351.8305.24800678.44750-1.1523015.2216013.97480HepG2BOP1
THRAENSG00000126351.8429.42180660.86980-0.622005.907804.83730HepG2CALR
THRAENSG00000126351.8702.95160980.49160-0.480102.598601.65690HepG2CCAR1
THRAENSG00000126351.8332.63060798.91080-1.2641017.3279015.59910HepG2CIRBP
THRAENSG00000126351.8247.84570622.84370-1.3294016.9915015.45840HepG2CPSF6
THRAENSG00000126351.8192.21080273.28670-0.507702.324701.33110HepG2CSTF2
THRAENSG00000126351.8336.70680513.23930-0.608104.784203.57090HepG2DDX24
THRAENSG00000126351.8416.46420707.28740-0.764104.115802.93540HepG2DDX59
THRAENSG00000126351.8246.42240482.92010-0.970707.501505.71800HepG2AGO1
THRAENSG00000126351.81041.15140803.912600.373002.373001.82160HepG2EIF2S1
THRAENSG00000126351.8262.22290888.36540-1.7604028.4359026.42440HepG2EIF4A3
THRAENSG00000126351.8514.50530865.04860-0.749605.339604.40550HepG2EIF4B
THRAENSG00000126351.8371.90850615.45110-0.726707.480506.11030HepG2EWSR1
THRAENSG00000126351.8369.96080499.59960-0.433402.684601.55550HepG2FASTKD2
THRAENSG00000126351.8456.84190831.53520-0.864108.737707.59040HepG2G3BP1
THRAENSG00000126351.8314.21770559.68920-0.832904.998903.50430HepG2GRSF1
THRAENSG00000126351.8458.29590601.28580-0.391802.680701.71630HepG2HDGF
THRAENSG00000126351.8374.99070506.89960-0.434802.457101.80040HepG2HNRNPC
THRAENSG00000126351.8794.67130554.364100.519406.344105.31860HepG2HNRNPF
THRAENSG00000126351.8634.85800842.20000-0.407702.775802.07690HepG2HNRNPK
THRAENSG00000126351.8526.38910665.74210-0.338802.396401.50950HepG2HNRNPM
THRAENSG00000126351.8602.73530977.28930-0.697305.100903.44850HepG2HSPD1
THRAENSG00000126351.8734.36610545.891700.427803.604602.78650HepG2IGF2BP1
THRAENSG00000126351.8454.81840845.20770-0.894009.829608.64400HepG2IGF2BP2
THRAENSG00000126351.8712.597301035.91110-0.539702.980602.11670HepG2LARP4
THRAENSG00000126351.8371.09830896.79610-1.2730017.8331016.24280HepG2MAGOH
THRAENSG00000126351.8623.11350901.78950-0.533303.665002.94810HepG2MATR3
THRAENSG00000126351.81094.21350780.864600.486604.347403.34620HepG2MSI2
THRAENSG00000126351.8417.81560597.44170-0.515903.395502.56650HepG2NSUN2
THRAENSG00000126351.8509.05510849.21280-0.7383011.7260010.61500HepG2PCBP1
THRAENSG00000126351.8666.73820864.14500-0.374203.797503.17940HepG2PTBP1
THRAENSG00000126351.8395.99920594.12460-0.585304.512803.77270HepG2PUF60
THRAENSG00000126351.8485.16270641.46850-0.402903.773403.07700HepG2PUS1
THRAENSG00000126351.8267.73550515.84080-0.946103.102302.35850HepG2RAVER1
THRAENSG00000126351.8320.41690838.01850-1.3870025.5477024.29440HepG2RBM22
THRAENSG00000126351.8558.51250849.33640-0.604706.219005.24550HepG2RBM25
THRAENSG00000126351.8746.64100961.67780-0.365103.525402.93060HepG2NELFE
THRAENSG00000126351.8610.42350895.73130-0.553306.993206.07880HepG2RECQL
THRAENSG00000126351.8208.11630331.94820-0.673603.328602.47630HepG2RRP9
THRAENSG00000126351.8518.99290899.61620-0.7936012.8924011.76290HepG2SF3B4
THRAENSG00000126351.8680.50100569.753700.256202.206501.56850HepG2SLBP
THRAENSG00000126351.8381.71050522.90810-0.454103.179102.49720HepG2SMN1
THRAENSG00000126351.8482.66270742.03240-0.620503.337402.47470HepG2SNRNP70
THRAENSG00000126351.8678.53730946.48220-0.480106.667305.98310HepG2SRFBP1
THRAENSG00000126351.8330.83240939.03320-1.5051039.4595038.12830HepG2SRSF1
THRAENSG00000126351.8445.06950586.65870-0.398502.929402.28610HepG2SRSF5
THRAENSG00000126351.8530.20650763.97820-0.527006.394305.61660HepG2SRSF9
THRAENSG00000126351.8187.19050433.03700-1.210009.956508.80610HepG2SUPV3L1
THRAENSG00000126351.8436.59990844.11930-0.9511015.9373014.75580HepG2TAF15
THRAENSG00000126351.8112.95270290.24990-1.361609.909208.25360HepG2TFIP11
THRAENSG00000126351.8637.02750489.205500.380802.878602.37040HepG2TIAL1
THRAENSG00000126351.8619.34300493.669000.327102.679502.12240HepG2TRIM56
THRAENSG00000126351.8590.47870720.53060-0.287202.304401.65790HepG2UPF1
THRAENSG00000126351.8526.63260695.64270-0.401503.614502.94520HepG2UTP3
THRAENSG00000126351.8388.74010725.21590-0.8996016.2156014.81370HepG2ZC3H8
THRAENSG00000126351.81010.39740792.444600.350404.421403.77210HepG2ZNF622
THRAENSG00000126351.8516.91060822.23850-0.669606.855604.94650K562AARS
THRAENSG00000126351.81567.295201249.434200.326903.923203.26880K562AGGF1
THRAENSG00000126351.8950.892401237.72510-0.380302.826201.94430K562BOP1
THRAENSG00000126351.8433.51960644.12480-0.571204.681903.01590K562CIRBP
THRAENSG00000126351.8974.67870723.639800.429604.066402.77140K562DDX3X
THRAENSG00000126351.8920.09180733.681600.326502.960501.59230K562DDX6
THRAENSG00000126351.81238.64010868.535500.512004.659902.85540K562DHX30
THRAENSG00000126351.8676.494701250.46610-0.8863019.4177017.76860K562EIF2S2
THRAENSG00000126351.8572.70750404.420500.501804.245003.26920K562EIF3G
THRAENSG00000126351.82062.627301750.347300.236702.301001.43980K562EIF4G2
THRAENSG00000126351.81632.176501179.655400.468305.482503.66060K562EXOSC5
THRAENSG00000126351.81556.350601271.285600.291802.091901.35110K562FIP1L1
THRAENSG00000126351.8458.42830781.01440-0.768707.240405.27410K562FKBP4
THRAENSG00000126351.8194.80140391.72820-1.007805.285504.23720K562G3BP2
THRAENSG00000126351.81012.392401666.28230-0.7189010.839509.31480K562GRSF1
THRAENSG00000126351.81710.073701412.594700.275602.738301.84920K562HNRNPU
THRAENSG00000126351.81337.534401723.57320-0.365803.040202.20710K562HSPD1
THRAENSG00000126351.81590.285802016.29370-0.342404.183701.78230K562CCAR2
THRAENSG00000126351.8850.30130630.326600.431803.790802.69590K562MATR3
THRAENSG00000126351.81865.655701276.909700.546902.508201.34640K562PABPC1
THRAENSG00000126351.81353.59340841.652000.685402.949701.91740K562PABPN1
THRAENSG00000126351.8916.692901397.80060-0.608606.115603.70040K562PKM
THRAENSG00000126351.8888.359201150.87950-0.373502.824902.01390K562POLR2G
THRAENSG00000126351.8462.15360763.21570-0.723706.316005.18280K562PRPF8
THRAENSG00000126351.81323.351801909.74470-0.529206.289605.06310K562PUF60
THRAENSG00000126351.81655.145202031.42930-0.295502.853001.76810K562PUM1
THRAENSG00000126351.8528.89750407.004600.377802.512901.69970K562SF3B4
THRAENSG00000126351.81594.26720937.944900.765203.270601.80850K562SFPQ
THRAENSG00000126351.8938.03300697.712100.426903.349702.19450K562SRFBP1
THRAENSG00000126351.81280.372401498.25880-0.226702.591101.68030K562SRPK2
THRAENSG00000126351.81041.76320774.326900.427903.687902.44720K562SRSF4
THRAENSG00000126351.8790.57220587.310100.428703.502702.56500K562TIA1
THRAENSG00000126351.81410.47770775.981900.8620011.168709.17530K562TIAL1
THRAENSG00000126351.81119.03990824.299400.440903.170102.14270K562TRIM56
THRAENSG00000126351.8275.45010391.90280-0.508703.230402.36400K562U2AF2
THRAENSG00000126351.81049.895401567.56690-0.578305.327403.66230K562UTP3
THRAENSG00000126351.81775.706301368.906500.375303.531202.53460K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for THRA is not available on ENCORE database.






No RBPs affect the alternative splcing events of THRA on ENCORE database.





The Knockdown/knockout RNA-Seq assay for THRA is not avaliable on ENCORE database.