TCAIM

General Information

Gene Name       : TCAIM
Gene ID             : ENSG00000179152.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TCAIM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TCAIMENSG00000179152.1914.1311.4912.81ENCSR000AEF
HepG2TCAIMENSG00000179152.198.1213.5210.82ENCSR985KAT
K562TCAIMENSG00000179152.1923.3024.8424.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TCAIM is not avaliable on ENCORE database.



Proteins bound to RNA
  • TCAIM RNA is bound by 2 proteins.  







eCLIP assay for TCAIM is not avaliable on ENCORE database.





2 proteins are bound to TCAIM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34440070144400781+3'-UTR,intron-Distal3.397645.05294K562UPF1
chr34440082744400894+3'-UTR,intron-Distal3.256704.44982K562UPF1
chr34440098144401023+3'-UTR,intron-Distal3.217703.91938K562UPF1
chr34440093144400981+3'-UTR,intron-Distal5.030926.81621K562UPF1
chr34438127744381360+intron-Distal3.627955.35459K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TCAIM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TCAIM is not available on ENCORE database.

  • 75 RBPs can affect the levels of TCAIM.  








The Knockdown/knockout RNA-Seq assay for TCAIM is not available on ENCORE database.





75 RBPs can affect the gene expression of TCAIM :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TCAIMENSG00000179152.14414.97370297.905700.478102.692201.63510HepG2AATF
TCAIMENSG00000179152.14967.71070552.354700.808908.631307.29650HepG2ASCC1
TCAIMENSG00000179152.14805.15180656.400300.294602.442601.79010HepG2AUH
TCAIMENSG00000179152.14454.36520292.428300.635703.838102.79610HepG2BCLAF1
TCAIMENSG00000179152.14764.72990490.328000.641106.793305.65680HepG2CALR
TCAIMENSG00000179152.14854.65610524.773800.703506.681305.51310HepG2CIRBP
TCAIMENSG00000179152.14628.70150405.466200.632708.220107.19200HepG2CKAP4
TCAIMENSG00000179152.14931.61150479.159000.9591012.7379011.38400HepG2CPSF6
TCAIMENSG00000179152.14410.19230589.02520-0.522005.841004.81980HepG2DAZAP1
TCAIMENSG00000179152.14517.25090328.650800.654205.195604.29420HepG2DDX21
TCAIMENSG00000179152.14490.90980321.634600.609904.729603.52310HepG2DDX24
TCAIMENSG00000179152.14367.04410250.677900.550002.916801.48670HepG2DDX28
TCAIMENSG00000179152.14861.38080608.942200.500204.200202.62480HepG2DDX47
TCAIMENSG00000179152.14548.62120330.862300.729505.014004.01000HepG2DDX55
TCAIMENSG00000179152.14671.45200515.585000.381002.327001.39990HepG2DDX5
TCAIMENSG00000179152.14483.63110394.715300.293002.060001.48150HepG2DNAJC2
TCAIMENSG00000179152.14780.92190583.602100.420102.491701.88370HepG2EIF4A3
TCAIMENSG00000179152.14386.36790568.20160-0.556402.806302.11270HepG2EIF4B
TCAIMENSG00000179152.14752.67040556.637400.435202.948602.10880HepG2EIF4G2
TCAIMENSG00000179152.14492.10780313.205400.651805.193303.69760HepG2FASTKD2
TCAIMENSG00000179152.14334.95260562.43490-0.747704.594603.62160HepG2FIP1L1
TCAIMENSG00000179152.14701.03310422.367700.730903.919502.25020HepG2HLTF
TCAIMENSG00000179152.14859.99530541.310600.667809.633508.08470HepG2HNRNPA2B1
TCAIMENSG00000179152.14438.99730560.75880-0.353202.309801.65030HepG2HNRNPF
TCAIMENSG00000179152.14648.93950536.569700.274202.067401.47380HepG2HNRNPL
TCAIMENSG00000179152.14795.94400518.406700.618504.750303.94770HepG2HNRNPLL
TCAIMENSG00000179152.14711.84790555.221100.358401.980301.40020HepG2IGF2BP2
TCAIMENSG00000179152.14260.98590592.30960-1.1824011.7391010.50400HepG2MATR3
TCAIMENSG00000179152.14314.09120606.26540-0.948808.711407.62080HepG2NCBP2
TCAIMENSG00000179152.14719.65420539.935200.414402.462801.77770HepG2PABPC4
TCAIMENSG00000179152.14623.71490417.211000.580003.138202.03370HepG2PCBP2
TCAIMENSG00000179152.14413.08720255.281700.694304.476203.47520HepG2PRPF8
TCAIMENSG00000179152.14663.85150536.208900.308002.192901.69510HepG2PTBP1
TCAIMENSG00000179152.14547.28640413.028800.406003.443002.77350HepG2PUS1
TCAIMENSG00000179152.14728.29460580.663700.326702.391301.80340HepG2QKI
TCAIMENSG00000179152.14798.97840622.037300.361102.900302.02490HepG2RBM15
TCAIMENSG00000179152.14976.73560629.887800.632808.729507.92840HepG2RBM22
TCAIMENSG00000179152.14481.89550596.72420-0.308301.922001.45260HepG2NELFE
TCAIMENSG00000179152.14796.55990603.968400.399203.055102.34300HepG2RPLP0
TCAIMENSG00000179152.14507.33360252.531201.006408.441907.16810HepG2RRP9
TCAIMENSG00000179152.14665.07760438.013700.602403.161001.53060HepG2RTF1
TCAIMENSG00000179152.14467.25040315.023000.568602.491901.59750HepG2SERBP1
TCAIMENSG00000179152.14911.03670513.157100.8280010.106908.83540HepG2SF3B1
TCAIMENSG00000179152.14719.12510558.209000.365303.224402.59230HepG2SF3B4
TCAIMENSG00000179152.14614.24190410.477200.581403.416502.33950HepG2SMNDC1
TCAIMENSG00000179152.141148.15780711.442100.6904013.5107012.62610HepG2SRFBP1
TCAIMENSG00000179152.141023.62600552.053900.890703.849402.64790HepG2SRSF3
TCAIMENSG00000179152.14380.41510550.47100-0.533105.096104.28740HepG2SRSF5
TCAIMENSG00000179152.14763.88240474.053000.6882010.652209.69380HepG2SRSF9
TCAIMENSG00000179152.14442.66730617.71250-0.480704.677104.04560HepG2SSB
TCAIMENSG00000179152.14670.17940376.262700.832705.489503.80010HepG2SUB1
TCAIMENSG00000179152.14502.53680379.932100.403402.742901.80560HepG2SUPT6H
TCAIMENSG00000179152.14681.50320329.382301.0489010.186109.02370HepG2SUPV3L1
TCAIMENSG00000179152.14322.93360220.781900.548502.695501.71000HepG2TFIP11
TCAIMENSG00000179152.14603.20740481.225700.325802.208501.45900HepG2TIA1
TCAIMENSG00000179152.14553.44760431.602800.358602.286801.82330HepG2TIAL1
TCAIMENSG00000179152.14773.90660576.508200.424702.230601.48320HepG2UBE2L3
TCAIMENSG00000179152.14600.45330433.152700.471104.691403.82180HepG2UPF1
TCAIMENSG00000179152.14646.00510442.774900.544902.950501.85410HepG2XRCC6
TCAIMENSG00000179152.14662.68600339.157000.9663012.9806011.70250HepG2ZC3H8
TCAIMENSG00000179152.14973.053201152.77180-0.244502.133901.62400K562AGGF1
TCAIMENSG00000179152.141472.23520864.637000.767709.690208.00900K562BOP1
TCAIMENSG00000179152.141738.381001377.649600.335403.396102.07030K562CCDC124
TCAIMENSG00000179152.14879.139401172.14920-0.415004.744003.26820K562CPEB4
TCAIMENSG00000179152.141880.571401575.164400.255602.189301.32340K562CELF1
TCAIMENSG00000179152.141458.278301212.662200.266002.409201.79530K562DDX47
TCAIMENSG00000179152.141107.09710844.153700.391104.416303.53500K562EIF2S2
TCAIMENSG00000179152.14567.32700726.07410-0.355902.973002.14810K562EIF3G
TCAIMENSG00000179152.14921.25510626.617600.555904.510703.00610K562FKBP4
TCAIMENSG00000179152.141104.48840668.374100.724603.002902.26110K562G3BP2
TCAIMENSG00000179152.141752.432101230.867900.509605.149804.07980K562HSPD1
TCAIMENSG00000179152.141267.60530749.481600.758004.559103.32530K562KRR1
TCAIMENSG00000179152.14658.31310903.46450-0.456704.250603.08570K562MATR3
TCAIMENSG00000179152.14677.07360500.597800.435602.722701.97930K562PRPF8
TCAIMENSG00000179152.141885.013301456.647600.371804.825403.54430K562PUM2
TCAIMENSG00000179152.141575.565801189.631800.405303.098902.52990K562PUS1
TCAIMENSG00000179152.141025.83940637.790300.685604.056102.28160K562RAVER1
TCAIMENSG00000179152.14590.322901049.53800-0.830202.492201.37460K562SF1
TCAIMENSG00000179152.141315.27400834.747700.655902.809801.82880K562SF3B1
TCAIMENSG00000179152.14419.91120559.74500-0.414702.410101.46950K562SRFBP1
TCAIMENSG00000179152.14523.91540862.13780-0.718607.897706.71120K562SRSF1
TCAIMENSG00000179152.14676.14380484.652700.480302.981301.92460K562SUPV3L1
TCAIMENSG00000179152.141275.90210947.244200.429606.267305.23820K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TCAIM is not available on ENCORE database.





21 RBPs can affect the splicing of TCAIM :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETCAIMENSG00000179152.14chr3+4439970844399795443992324439936844402856444030100.353000.000000.00047includedHepG2RBM22
SETCAIMENSG00000179152.14chr3+4440383844403956444028564440301044409023444092000.088000.001350.03998includedK562AKAP8L
SETCAIMENSG00000179152.14chr3+4439970844399837443992324439936844402856444030100.240000.000020.00112includedK562AKAP8L
SETCAIMENSG00000179152.14chr3+443962304439630344379610443798114439923244399368-0.081000.000010.00052excludedK562AKAP8L
SETCAIMENSG00000179152.14chr3+443997084439983744399232443993684440285644403010-0.455000.000070.00139excludedHepG2U2AF2
SETCAIMENSG00000179152.14chr3+443997084439983744399232443993684440285644403010-0.357000.000490.03496excludedHepG2AKAP1
SETCAIMENSG00000179152.14chr3+443997084439979544399232443993684440285644403010-0.355000.000960.06808excludedHepG2DDX3X
SETCAIMENSG00000179152.14chr3+4439970844399837443992324439936844402856444030100.177000.006420.07520includedK562PUS1
SETCAIMENSG00000179152.14chr3+443997084439983744399232443993684440285644403010-0.294000.000050.00184excludedK562U2AF1
SETCAIMENSG00000179152.14chr3+443997084439983744399232443993684440285644403010-0.380000.000740.01997excludedHepG2SRSF1
SETCAIMENSG00000179152.14chr3+443962304439630344380297443803264439923244399368-0.059000.000440.01839excludedK562UTP18
SETCAIMENSG00000179152.14chr3+443997084439983744399232443993684440285644403010-0.283000.000140.00375excludedK562U2AF2
SETCAIMENSG00000179152.14chr3+443962304439630344379610443798114439923244399368-0.154000.001950.03435excludedK562U2AF2
SETCAIMENSG00000179152.14chr3+443962304439630344379610443798114439923244399368-0.054000.000490.01562excludedK562RBM15
SETCAIMENSG00000179152.14chr3+443962304439630344380297443803264439923244399368-0.078000.000030.00180excludedK562AGGF1
A3SSTCAIMENSG00000179152.14chr3+4440894744409200444090234440920044402856444030100.429000.000450.04243longerK562SRSF1
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443802974438032644402856444030100.208000.000150.018201includedHepG2RBM22
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.240000.001940.054171includedK562PTBP1
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.229000.001130.036421includedK562UCHL5
MXETCAIMENSG00000179152.14chr3+4439623044396303443992324439936844379610443798114440285644403010-0.364000.000680.014782includedK562U2AF1
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.213000.002230.057741includedK562XRN2
MXETCAIMENSG00000179152.14chr3+4439623044396303443992324439936844380297443803264440285644403010-0.238000.000180.003972includedK562U2AF2
MXETCAIMENSG00000179152.14chr3+4439623044396303443992324439936844379610443798114440285644403010-0.357000.000430.008092includedK562U2AF2
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.287000.000050.002551includedK562TARDBP
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.261000.000570.043851includedK562RBM22
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443802974438032644402856444030100.115000.004130.091211includedK562TAF15
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.264000.000450.027741includedK562TIA1
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.257000.000260.038181includedK562EWSR1
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443796104437981144402856444030100.217000.002310.087301includedK562IGF2BP2
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443802974438032644402856444030100.200000.006090.086861includedK562PRPF8
MXETCAIMENSG00000179152.14chr3+44396230443963034439923244399368443802974438032644402856444030100.202000.006570.097691includedK562SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TCAIM is not avaliable on ENCORE database.