STX6

General Information

Gene Name       : STX6
Gene ID             : ENSG00000135823.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STX6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STX6ENSG00000135823.1312.3511.7312.04ENCSR000AEF
HepG2STX6ENSG00000135823.139.0011.2910.14ENCSR985KAT
K562STX6ENSG00000135823.137.557.287.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STX6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STX6 RNA is bound by 17 proteins.  







eCLIP assay for STX6 is not avaliable on ENCORE database.





17 proteins are bound to STX6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1180945514180945579-3'-UTR,intron-Distal3.630084.22460K562RBM15
chr1180944174180944219-3'-UTR,intron-Distal3.567923.77931K562UPF1
chr1180962502180962577-3'-UTR,CDS,intron-Distal,intron-Proximal3.238934.65237HepG2U2AF2
chr1180944356180944430-3'-UTR,intron-Distal3.417685.33418K562FAM120A
chr1180945516180945596-3'-UTR,intron-Distal4.635965.35125HepG2RBM15
chr1180944352180944461-3'-UTR,intron-Distal3.008255.00311K562UPF1
chr1180945290180945371-3'-UTR,intron-Distal,intron-Proximal3.390197.79680K562RBM15
chr1180991825180991931-5'-UTR,intron-Distal3.745414.29577K562FTO
chr1180991922180991996-5'-UTR,intron-Distal3.482365.22400HepG2DDX3X
chr1180991824180991909-5'-UTR,intron-Distal3.730903.31827HepG2GRWD1
chr1180991789180991901-5'-UTR,CDS,intron-Distal3.993706.89283HepG2PRPF4
chr1180991922180992027-5'-UTR,intron-Distal,intron-Proximal3.085853.11583K562UCHL5
chr1180991916180992027-5'-UTR,intron-Distal,intron-Proximal3.872625.14848K562ZNF622
chr1180991902180992036-5'-UTR,intron-Distal,intron-Proximal3.595155.44096K562DDX3X
chr1180991917180992002-5'-UTR,intron-Distal3.050144.14491HepG2NCBP2
chr1180971709180971767-CDS,intron-Distal,intron-Proximal5.054255.35117HepG2PRPF8
chr1180957358180957482-CDS,intron-Distal,intron-Proximal3.402244.41784HepG2GRWD1
chr1180957352180957414-CDS,intron-Distal,intron-Proximal3.683585.30520K562UCHL5
chr1180957446180957547-CDS,intron-Distal,intron-Proximal4.561648.05832K562SF3B4
chr1180974424180974533-CDS,intron-Distal,intron-Proximal3.063894.88483K562ZNF622
chr1180974428180974475-CDS,intron-Distal,intron-Proximal4.347074.07072K562UCHL5
chr1180953803180953922-CDS,intron-Distal,intron-Proximal3.773295.78807K562BUD13
chr1180974421180974500-CDS,intron-Distal,intron-Proximal3.009303.39306HepG2GRWD1
chr1180953836180953897-CDS,intron-Distal3.173683.32039HepG2PPIG
chr1180958062180958153-intron-Distal4.264039.41035K562KHSRP
chr1180968269180968339-intron-Distal4.385095.05488HepG2QKI
chr1180978657180978777-intron-Distal4.272075.41654K562KHSRP
chr1180958217180958276-intron-Distal4.869148.24653K562KHSRP
chr1180974239180974346-intron-Distal,intron-Proximal3.749743.24603K562KHSRP
chr1180958276180958325-intron-Distal4.281004.76003K562KHSRP
chr1180962587180962690-intron-Distal,intron-Proximal4.259474.54401K562KHSRP
chr1180958170180958217-intron-Distal3.363884.70224K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STX6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STX6 is not available on ENCORE database.

  • 86 RBPs can affect the levels of STX6.  








The Knockdown/knockout RNA-Seq assay for STX6 is not available on ENCORE database.





86 RBPs can affect the gene expression of STX6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STX6ENSG00000135823.9855.95500573.974800.576405.337003.88700HepG2AATF
STX6ENSG00000135823.91078.20230653.702800.7218014.5725013.41030HepG2ACO1
STX6ENSG00000135823.91143.21940698.290200.711106.938405.33650HepG2AKAP8
STX6ENSG00000135823.9924.20090656.841700.492605.563904.51040HepG2AKAP8L
STX6ENSG00000135823.91656.97560768.556501.1082018.0724016.27630HepG2ASCC1
STX6ENSG00000135823.91454.363801035.575500.489907.803106.74440HepG2AUH
STX6ENSG00000135823.91784.79080700.366701.3495031.6391029.99760HepG2BOP1
STX6ENSG00000135823.9985.99500696.305600.501805.156904.14430HepG2CALR
STX6ENSG00000135823.91283.95430730.187800.814209.976108.58640HepG2CIRBP
STX6ENSG00000135823.9513.24030653.64200-0.348903.171802.46970HepG2CKAP4
STX6ENSG00000135823.93058.14400764.157602.0006033.3297030.80440HepG2CNOT7
STX6ENSG00000135823.9684.20830449.213900.606905.511004.06990HepG2CSTF2
STX6ENSG00000135823.91303.30940926.449500.492307.037206.10120HepG2CELF1
STX6ENSG00000135823.9985.70420633.334600.638106.869405.84950HepG2DDX21
STX6ENSG00000135823.91281.07490889.761800.525804.338903.57040HepG2DDX3X
STX6ENSG00000135823.91366.62950730.137800.904306.189104.75670HepG2DDX59
STX6ENSG00000135823.9482.12630657.95830-0.448602.991601.94480HepG2DDX5
STX6ENSG00000135823.91387.79960764.421100.860309.472208.40140HepG2DDX6
STX6ENSG00000135823.9473.16950625.43750-0.402503.343502.60900HepG2DKC1
STX6ENSG00000135823.9878.66810685.632300.357803.300102.53680HepG2DNAJC21
STX6ENSG00000135823.9574.05840679.60610-0.243501.868901.31420HepG2DNAJC2
STX6ENSG00000135823.9891.88590583.162000.612904.321802.92440HepG2AGO1
STX6ENSG00000135823.91110.91870734.760000.596305.169704.37330HepG2EIF2S1
STX6ENSG00000135823.9833.21750514.378800.695806.290204.96640HepG2EIF3D
STX6ENSG00000135823.92137.918501188.985300.8464024.8151023.32500HepG2ETF1
STX6ENSG00000135823.9482.63120638.85660-0.404602.859502.01080HepG2EWSR1
STX6ENSG00000135823.91313.63480838.552200.647505.631404.57180HepG2FIP1L1
STX6ENSG00000135823.91197.37710751.698500.671604.870603.41580HepG2FUS
STX6ENSG00000135823.91183.06790760.006200.638305.819804.86890HepG2G3BP1
STX6ENSG00000135823.9590.69680806.94110-0.450003.047602.11370HepG2G3BP2
STX6ENSG00000135823.9905.82070624.148300.537206.235604.84180HepG2HDGF
STX6ENSG00000135823.91094.99480915.525300.258202.171001.33310HepG2HNRNPA2B1
STX6ENSG00000135823.9635.45910863.75550-0.442803.810002.97080HepG2IGF2BP1
STX6ENSG00000135823.91345.57750772.503200.800509.677808.50060HepG2IGF2BP2
STX6ENSG00000135823.9495.81220777.05570-0.648204.262302.99180HepG2KHSRP
STX6ENSG00000135823.91517.737501105.025000.457702.925602.07110HepG2LARP4
STX6ENSG00000135823.91921.89730824.215501.2213011.2557010.04580HepG2MATR3
STX6ENSG00000135823.9652.87210843.61170-0.369802.111601.55540HepG2NCBP2
STX6ENSG00000135823.91129.32140720.487300.648304.597202.76030HepG2NKRF
STX6ENSG00000135823.9775.44930987.84490-0.349303.216002.39640HepG2NOL12
STX6ENSG00000135823.9538.78170757.07270-0.490705.474504.33870HepG2PARN
STX6ENSG00000135823.91383.02050734.979600.9119023.3484021.87530HepG2PCBP1
STX6ENSG00000135823.9697.34890551.625100.338102.012801.32050HepG2PRPF8
STX6ENSG00000135823.91161.84810747.860500.6355010.787609.84350HepG2PTBP1
STX6ENSG00000135823.91483.346101000.983800.5673012.6012011.53110HepG2PUM1
STX6ENSG00000135823.91032.28090665.850600.6325011.2263010.12770HepG2PUS1
STX6ENSG00000135823.91108.48890809.970000.452604.831204.03990HepG2QKI
STX6ENSG00000135823.91053.30200686.677100.617103.206502.45120HepG2RAVER1
STX6ENSG00000135823.91826.86120993.770400.8783021.8552020.67950HepG2RBM22
STX6ENSG00000135823.9995.41630735.092800.437303.898503.10920HepG2RBM25
STX6ENSG00000135823.91160.61140944.849700.296602.110201.50380HepG2RPLP0
STX6ENSG00000135823.9709.93450500.549600.504104.118003.38340HepG2RPS19
STX6ENSG00000135823.9972.50080724.646900.424303.279502.40830HepG2RPS2
STX6ENSG00000135823.91445.22010793.042200.865708.442807.21290HepG2SF3A3
STX6ENSG00000135823.9979.71380688.427800.509004.373603.50440HepG2SF3B1
STX6ENSG00000135823.9927.59640778.635000.252401.941701.43170HepG2SF3B4
STX6ENSG00000135823.9715.56120904.12120-0.337403.683902.89320HepG2SLBP
STX6ENSG00000135823.91021.35000794.314700.362604.693303.89200HepG2SMN1
STX6ENSG00000135823.9945.86890700.257300.433702.359501.48170HepG2SMNDC1
STX6ENSG00000135823.91272.85960766.001900.732605.070004.00130HepG2SNRNP70
STX6ENSG00000135823.91900.219301122.424900.7594021.7391020.68150HepG2SRFBP1
STX6ENSG00000135823.91470.13670812.720000.8550020.9602019.91520HepG2SRSF1
STX6ENSG00000135823.9896.66720641.721600.482502.529501.38070HepG2SUB1
STX6ENSG00000135823.91388.950301058.847100.391405.673404.84140HepG2SUCLG1
STX6ENSG00000135823.91048.37040766.929900.450902.594501.31420HepG2SUGP2
STX6ENSG00000135823.91025.51630711.701100.526904.077003.27950HepG2SUPV3L1
STX6ENSG00000135823.9725.92160477.054500.605604.603403.36580HepG2TFIP11
STX6ENSG00000135823.9868.07900671.236600.370903.032902.16340HepG2TIA1
STX6ENSG00000135823.91006.26460703.305200.516707.613806.54960HepG2UPF1
STX6ENSG00000135823.9887.90850722.914400.296502.557401.54430HepG2UTP18
STX6ENSG00000135823.9830.04460679.016600.289602.444601.87410HepG2UTP3
STX6ENSG00000135823.91270.51450855.014500.571306.445105.41680K562AKAP8L
STX6ENSG00000135823.91214.20730920.066400.400104.746403.54940K562DKC1
STX6ENSG00000135823.91250.739101478.13720-0.241002.272301.41750K562EIF4G2
STX6ENSG00000135823.9653.93530484.511500.432503.613802.05170K562FUS
STX6ENSG00000135823.9585.40260818.33210-0.483305.008203.49640K562GLRX3
STX6ENSG00000135823.9365.49710689.78170-0.9163011.016609.89060K562HNRNPC
STX6ENSG00000135823.91316.05300907.389400.536305.877304.57100K562KIF1C
STX6ENSG00000135823.9742.15530933.69850-0.331202.408701.62130K562MAGOH
STX6ENSG00000135823.91398.136601016.504600.459804.802203.54120K562MBNL1
STX6ENSG00000135823.9409.84170540.34730-0.398802.514701.68370K562METAP2
STX6ENSG00000135823.91154.46920712.495600.696202.067401.32780K562NAA15
STX6ENSG00000135823.91167.50260912.538200.355403.187101.73810K562PCBP1
STX6ENSG00000135823.9645.64330830.81830-0.363802.495601.56860K562PCBP2
STX6ENSG00000135823.9627.44910810.67590-0.369602.130101.39920K562PCBP3
STX6ENSG00000135823.91393.25280847.950800.716308.314507.42130K562PUS1
STX6ENSG00000135823.91084.84810826.191100.392803.999403.30240K562RBM15
STX6ENSG00000135823.9415.36600554.00590-0.415502.592701.54830K562SAFB
STX6ENSG00000135823.91211.28290943.308200.360604.053003.07530K562SF3A3
STX6ENSG00000135823.9478.28510623.68970-0.383002.710301.90080K562SYNCRIP
STX6ENSG00000135823.9569.33190900.05290-0.660706.618505.48270K562TARDBP
STX6ENSG00000135823.9605.966201013.57660-0.7421013.5291012.08520K562UPF1
STX6ENSG00000135823.9929.581301380.05370-0.570106.417604.44690K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STX6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of STX6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for STX6 is not avaliable on ENCORE database.