SNHG17

General Information

Gene Name       : SNHG17
Gene ID             : ENSG00000196756.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SNHG17)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SNHG17ENSG00000196756.119.6714.1511.91ENCSR000AEF
HepG2SNHG17ENSG00000196756.1140.2423.0231.63ENCSR985KAT
K562SNHG17ENSG00000196756.1128.2121.9125.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SNHG17 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SNHG17 RNA is bound by 28 proteins.  







eCLIP assay for SNHG17 is not avaliable on ENCORE database.





28 proteins are bound to SNHG17 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203706258937062593-intron-Distal3.95744400.00000HepG2DKC1
chr203705564637055714-intron-Distal4.6142112.61476K562EIF4G2
chr203704949137049549-intron-Distal3.387388.44353HepG2U2AF2
chr203705122637051296-intron-Distal3.787375.14628K562TARDBP
chr203705201737052057-intron-Distal3.371754.98883HepG2HNRNPC
chr203705646837056501-intron-Distal,intron-Proximal4.919588.32833K562LIN28B
chr203706323237063289-intron-Distal,intron-Proximal3.734826.51619K562AQR
chr203705833937058351-intron-Distal4.55299400.00000HepG2NOLC1
chr203705965637059744-intron-Distal,intron-Proximal3.106864.47986HepG2SRSF1
chr203706256637062568-intron-Distal3.78813400.00000HepG2DKC1
chr203704969737049842-intron-Distal,intron-Proximal4.4172413.30024HepG2AQR
chr203704972037049767-intron-Distal,intron-Proximal3.7891912.59752HepG2BUD13
chr203704956237049649-intron-Distal,intron-Proximal4.625303.27601HepG2RBM5
chr203705640937056468-intron-Distal,intron-Proximal4.6454822.47590K562LIN28B
chr203706055537060629-intron-Distal4.553455.58025K562HNRNPM
chr203705507037055197-intron-Distal,intron-Proximal3.499759.25624HepG2AQR
chr203705091837051020-intron-Distal,intron-Proximal5.4234317.00734K562HNRNPM
chr203705601137056013-intron-Distal3.99131400.00000HepG2DKC1
chr203704969837049763-intron-Distal,intron-Proximal4.2794923.52981HepG2U2AF2
chr203705972137059823-intron-Distal,intron-Proximal4.137999.18533HepG2AQR
chr203704970837049775-intron-Distal,intron-Proximal5.1236311.03354K562AQR
chr203705280237052823-intron-Distal4.236924.02766HepG2HNRNPC
chr203705836137058369-intron-Distal5.24983400.00000HepG2DKC1
chr203706188337061940-intron-Distal4.009063.18711HepG2ILF3
chr203705504237055150-intron-Distal,intron-Proximal4.1838513.28834HepG2PRPF8
chr203705957637059628-intron-Distal,intron-Proximal3.5870010.20257HepG2BUD13
chr203705134237051421-intron-Distal3.547366.81104K562TARDBP
chr203705499637055052-intron-Distal,intron-Proximal5.8806023.38793K562AQR
chr203705394037053949-intron-Distal4.33956400.00000HepG2DKC1
chr203705837437058379-intron-Distal3.3371721.02632K562SMNDC1
chr203706310437063166-intron-Distal,intron-Proximal3.098337.15382HepG2PRPF8
chr203705600037056010-intron-Distal3.23331400.00000HepG2DKC1
chr203706259937062602-intron-Distal4.19129400.00000HepG2DKC1
chr203705839837058403-intron-Distal5.09909400.00000HepG2DKC1
chr203706380237063822-intron-Distal4.417244.62947HepG2AQR
chr203705058637050685-intron-Distal,intron-Proximal3.645567.91700K562TARDBP
chr203705069037050760-intron-Distal,intron-Proximal3.7626914.12943HepG2PRPF8
chr203705103137051061-intron-Distal3.277113.11000HepG2HNRNPM
chr203706285737062930-intron-Distal4.602146.66631HepG2HNRNPM
chr203705397537053980-intron-Distal4.88643400.00000HepG2DKC1
chr203704966837049701-intron-Distal5.7412611.86816HepG2PPIG
chr203705509237055174-intron-Distal,intron-Proximal3.9277712.01630K562AQR
chr203706257337062577-intron-Distal3.99284400.00000HepG2DKC1
chr203705957637059648-intron-Distal,intron-Proximal5.0823620.14319HepG2EFTUD2
chr203705838537058406-intron-Distal3.46573400.00000HepG2NOLC1
chr203705102037051058-intron-Distal3.760973.03671K562HNRNPM
chr203705495237055042-intron-Distal,intron-Proximal4.458959.09021HepG2PRPF8
chr203705392537053937-intron-Distal4.07977400.00000HepG2DKC1
chr203705390637053916-intron-Distal4.15337400.00000HepG2DKC1
chr203705394937053975-intron-Distal4.41024400.00000HepG2DKC1
chr203705835237058357-intron-Distal5.39995400.00000HepG2DKC1
chr203705835137058355-intron-Distal4.14261400.00000HepG2NOLC1
chr203705840337058408-intron-Distal5.28470400.00000HepG2DKC1
chr203705064037050737-intron-Distal,intron-Proximal5.2747322.30360K562AQR
chr203705840837058414-intron-Distal5.13956400.00000HepG2DKC1
chr203706218537062240-intron-Distal3.229825.15138K562ILF3
chr203705837037058374-intron-Distal3.1769920.56809K562SMNDC1
chr203706260237062637-intron-Distal3.86844400.00000HepG2DKC1
chr203706052737060594-intron-Distal3.199933.00129HepG2SUGP2
chr203705844137058447-intron-Distal4.60461400.00000HepG2DKC1
chr203705830937058346-intron-Distal4.49244400.00000HepG2DKC1
chr203706381137063828-intron-Distal5.239116.22530K562AQR
chr203705830937058323-intron-Distal5.50178400.00000K562SMNDC1
chr203705070437050754-intron-Distal,intron-Proximal4.808094.24111K562EFTUD2
chr203705505237055064-intron-Distal,intron-Proximal6.3970816.98862K562AQR
chr203706362737063670-intron-Distal3.892344.49024K562AQR
chr203706256837062573-intron-Distal4.05698400.00000HepG2DKC1
chr203705967337059738-intron-Distal,intron-Proximal4.2015218.37572HepG2PPIG
chr203706383537063891-intron-Distal4.171315.71420K562RBM15
chr203705069137050740-intron-Distal,intron-Proximal4.838266.57024HepG2AQR
chr203705835837058361-intron-Distal5.41057400.00000HepG2DKC1
chr203706306737063143-intron-Distal,intron-Proximal5.0315912.17654K562AQR
chr203706379737063840-intron-Distal3.6386311.40182HepG2PRPF8
chr203705963937059708-intron-Distal,intron-Proximal5.7049534.09464HepG2PRPF8
chr203705838237058393-intron-Distal5.40029400.00000HepG2DKC1
chr203706382837063839-intron-Distal4.181374.98250K562AQR
chr203705390337053906-intron-Distal4.00657400.00000HepG2DKC1
chr203705504337055152-intron-Distal,intron-Proximal3.0429716.64287HepG2PPIG
chr203705089637050963-intron-Distal,intron-Proximal4.606143.82050HepG2SF3B4
chr203706052037060634-intron-Distal4.9626015.60322HepG2RBFOX2
chr203705205737052072-intron-Distal3.222314.19942HepG2HNRNPC
chr203705070137050766-intron-Distal,intron-Proximal3.073224.63108HepG2PPIG
chr203705391837053925-intron-Distal4.17475400.00000HepG2DKC1
chr203705604737056086-intron-Distal3.88170400.00000HepG2DKC1
chr203705832337058346-intron-Distal5.06545400.00000K562SMNDC1
chr203705389437053903-intron-Distal3.82031400.00000HepG2DKC1
chr203705227637052346-intron-Distal3.985933.91772K562TARDBP
chr203705835537058362-intron-Distal4.08201400.00000HepG2NOLC1
chr203704972637049758-intron-Distal,intron-Proximal3.824265.24452HepG2PPIG
chr203704965337049699-intron-Distal3.359804.24070HepG2GRWD1
chr203706389837063962-intron-Distal,intron-Proximal3.232863.41665HepG2GRWD1
chr203706257737062585-intron-Distal4.01876400.00000HepG2DKC1
chr203705965537059673-intron-Distal,intron-Proximal4.313738.68543HepG2PPIG
chr203706362937063674-intron-Distal3.122404.79866HepG2PRPF8
chr203705068737050825-intron-Distal,intron-Proximal4.1408810.95159K562HNRNPM
chr203705032937050410-intron-Distal3.824573.31570HepG2HNRNPK
chr203705501737055066-intron-Distal,intron-Proximal3.361067.99874HepG2BUD13
chr203704965137049668-intron-Distal,intron-Proximal4.8242612.90078HepG2PPIG
chr203705498437055087-intron-Distal,intron-Proximal3.711237.44037K562BUD13
chr203705975737059818-intron-Distal,intron-Proximal4.587695.50328HepG2RBM5
chr203706259337062599-intron-Distal4.00483400.00000HepG2DKC1
chr203706287437062922-intron-Distal3.714414.08043K562HNRNPM
chr203705831137058447-intron-Distal3.0424312.63355K562SERBP1
chr203705830837058344-intron-Distal3.0407673.53041K562AATF
chr203704950937049547-intron-Distal3.322956.89519HepG2PPIG
chr203705274837052802-intron-Distal4.614835.67326HepG2HNRNPC
chr203705508737055161-intron-Distal,intron-Proximal4.281018.26531K562BUD13
chr203705092237050973-intron-Distal,intron-Proximal3.626149.85768HepG2HNRNPM
chr203706065937060732-intron-Distal3.394104.83226HepG2HNRNPM
chr203705840637058448-intron-Distal3.05557400.00000HepG2NOLC1
chr203705082537050876-intron-Distal,intron-Proximal3.405723.59301K562HNRNPM
chr203706254737062566-intron-Distal3.14216400.00000HepG2DKC1
chr203705837037058374-intron-Distal5.34570400.00000HepG2DKC1
chr203705097337051031-intron-Distal,intron-Proximal4.474869.06892HepG2HNRNPM
chr203705839337058398-intron-Distal5.10364400.00000HepG2DKC1
chr203705086237050943-intron-Distal,intron-Proximal4.3860317.37507HepG2SF3A3
chr203705602337056029-intron-Distal4.10195400.00000HepG2DKC1
chr203706195437062002-intron-Distal3.973873.95871HepG2ILF3
chr203705086637050931-intron-Distal,intron-Proximal4.417244.62947HepG2AQR
chr203705601937056023-intron-Distal4.08040400.00000HepG2DKC1
chr203705509737055143-intron-Distal,intron-Proximal3.227574.57751HepG2U2AF2
chr203706369337063750-intron-Distal3.487834.04785HepG2XPO5
chr203705963737059685-intron-Distal,intron-Proximal4.0368611.81659K562AQR
chr203705973637059789-intron-Distal,intron-Proximal3.642809.30359HepG2BUD13
chr203705963837059693-intron-Distal,intron-Proximal3.583639.32736K562PRPF8
chr203705559337055652-intron-Distal3.958366.86504K562TARDBP
chr203704925137049276-intron-Distal3.968446.02363HepG2U2AF2
chr203705033137050462-intron-Distal3.732123.06617K562HNRNPK
chr203706263737062642-intron-Distal3.09646400.00000HepG2DKC1
chr203705837437058382-intron-Distal5.53860400.00000HepG2DKC1
chr203705604337056047-intron-Distal4.04811400.00000HepG2DKC1
chr203704932737049388-intron-Distal3.403274.19468HepG2SRSF1
chr203705393737053940-intron-Distal4.34261400.00000HepG2DKC1
chr203705642837056485-intron-Distal,intron-Proximal3.009084.46449HepG2LIN28B
chr203705508937055168-intron-Distal,intron-Proximal3.8722816.34889HepG2BUD13
chr203705751837057561-intron-Distal3.859443.19904K562TIA1
chr203705616637056184-intron-Distal3.395199.70965K562SMNDC1
chr203704976837049814-intron-Distal,intron-Proximal5.5119116.64506HepG2SF3B4
chr203705966737059727-intron-Distal,intron-Proximal3.433243.65536K562SRSF1
chr203705835637058370-intron-Distal3.7585931.41464K562SMNDC1
chr203705974937059794-intron-Distal,intron-Proximal4.845677.86715HepG2SF3A3
chr203705964837059700-intron-Distal,intron-Proximal5.080369.65239HepG2EFTUD2
chr203705948437059576-intron-Distal4.4599212.91797HepG2EFTUD2
chr203705601337056019-intron-Distal4.05944400.00000HepG2DKC1
chr203704961037049660-intron-Distal,intron-Proximal5.391226.01989HepG2PRPF8
chr203705556737055636-intron-Distal4.3977313.70814K562EIF4G2
chr203706379837063811-intron-Distal5.342337.28294K562AQR
chr203706313937063213-intron-Distal,intron-Proximal3.7893716.18208HepG2PPIG
chr203705451037054549-intron-Distal,intron-Proximal3.334664.64824K562PRPF8
chr203705834637058356-intron-Distal4.6933143.14379K562SMNDC1
chr203705964737059728-intron-Distal,intron-Proximal3.1646210.72411HepG2BUD13
chr203706059637060641-intron-Distal4.228933.86368HepG2HNRNPM
chr203706315937063220-intron-Distal3.082723.63043HepG2GRWD1
chr203705833037058339-intron-Distal5.23456400.00000HepG2NOLC1
chr203706065237060732-intron-Distal3.084506.35387K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SNHG17 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SNHG17 is not available on ENCORE database.

  • 88 RBPs can affect the levels of SNHG17.  








The Knockdown/knockout RNA-Seq assay for SNHG17 is not available on ENCORE database.





88 RBPs can affect the gene expression of SNHG17 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SNHG17ENSG00000196756.7384.95750285.248000.432402.988102.36030HepG2ACO1
SNHG17ENSG00000196756.7315.92640517.69860-0.712507.543606.50090HepG2AUH
SNHG17ENSG00000196756.7541.03660280.442800.947907.247905.68920HepG2BCCIP
SNHG17ENSG00000196756.7381.53710285.181600.419802.880602.20590HepG2CKAP4
SNHG17ENSG00000196756.7209.01380331.58650-0.665802.829302.05510HepG2CNOT7
SNHG17ENSG00000196756.7315.63190218.628300.529702.637101.55710HepG2CPSF7
SNHG17ENSG00000196756.7279.82190195.531500.517002.527101.55800HepG2YBX3
SNHG17ENSG00000196756.7568.06180405.532800.486104.424003.64440HepG2CELF1
SNHG17ENSG00000196756.7287.79250190.303500.596604.299503.51940HepG2DNAJC2
SNHG17ENSG00000196756.7291.99320210.466900.472201.922801.41850HepG2EIF2S1
SNHG17ENSG00000196756.7295.49760201.397800.553002.781701.60830HepG2EIF2S2
SNHG17ENSG00000196756.7291.07370154.785900.911005.297404.07510HepG2EIF3D
SNHG17ENSG00000196756.7419.03170232.556900.849405.949605.01480HepG2EIF4A3
SNHG17ENSG00000196756.7541.84290226.491301.2583010.497709.20260HepG2EIF4B
SNHG17ENSG00000196756.7537.51680430.183500.321302.258801.48870HepG2EIF4G1
SNHG17ENSG00000196756.7336.33980202.909500.729004.498902.33320HepG2EXOSC9
SNHG17ENSG00000196756.7377.79370234.742500.686404.090603.26140HepG2FXR1
SNHG17ENSG00000196756.7317.77930217.704300.545602.578901.93610HepG2G3BP1
SNHG17ENSG00000196756.7441.02200231.191400.931707.546506.06390HepG2G3BP2
SNHG17ENSG00000196756.7208.55370137.813200.597602.415401.58380HepG2GEMIN5
SNHG17ENSG00000196756.7148.04690222.30290-0.586502.175701.60430HepG2GPKOW
SNHG17ENSG00000196756.7441.31770306.979200.523602.372001.34030HepG2GRSF1
SNHG17ENSG00000196756.7636.39480220.571101.5286021.6181019.84000HepG2HNRNPK
SNHG17ENSG00000196756.7505.11960397.167700.346802.727802.05840HepG2HNRNPL
SNHG17ENSG00000196756.7262.53970184.963700.505202.238101.38240HepG2HNRNPM
SNHG17ENSG00000196756.7475.17370221.272501.1025010.287509.07410HepG2IGF2BP2
SNHG17ENSG00000196756.7377.52380207.731800.861702.822001.83070HepG2IGF2BP3
SNHG17ENSG00000196756.7288.95370218.777100.401302.339101.65750HepG2ILF2
SNHG17ENSG00000196756.7432.47200222.598100.958106.444704.84640HepG2KHSRP
SNHG17ENSG00000196756.7330.40340222.190900.572302.768701.63310HepG2LARP7
SNHG17ENSG00000196756.7396.95860233.185300.767404.948303.31240HepG2LIN28B
SNHG17ENSG00000196756.7677.21020234.825001.5279020.8650019.15200HepG2MAGOH
SNHG17ENSG00000196756.7459.25560236.122600.959707.128506.15110HepG2MATR3
SNHG17ENSG00000196756.7384.04770241.671100.668103.824003.08500HepG2NCBP2
SNHG17ENSG00000196756.7570.90890432.354200.400903.044902.24560HepG2NOL12
SNHG17ENSG00000196756.7249.20260115.696401.106904.547202.51840HepG2PA2G4
SNHG17ENSG00000196756.7727.52060303.114801.2630010.214908.47230HepG2PABPC1
SNHG17ENSG00000196756.7379.38740219.810000.787307.436506.51950HepG2PCBP1
SNHG17ENSG00000196756.7546.91210297.391100.878805.551903.42060HepG2PNPT1
SNHG17ENSG00000196756.7271.92160191.030800.509302.832002.08770HepG2PPIL4
SNHG17ENSG00000196756.7562.60560437.813500.361702.401801.77650HepG2PUM2
SNHG17ENSG00000196756.7889.15640496.774200.8397013.5200012.54790HepG2RBM22
SNHG17ENSG00000196756.7446.17820267.940200.735604.471003.19200HepG2RBM27
SNHG17ENSG00000196756.7342.71710231.847600.563703.724403.02390HepG2RECQL
SNHG17ENSG00000196756.7244.42930150.626400.698303.597202.90560HepG2RPS19
SNHG17ENSG00000196756.71015.21710301.172601.7530026.1784024.04780HepG2SF3A3
SNHG17ENSG00000196756.7532.22980232.857801.1925017.4364016.14450HepG2SF3B4
SNHG17ENSG00000196756.7306.25150395.76320-0.369902.234001.59230HepG2SLBP
SNHG17ENSG00000196756.7257.71110324.88920-0.334201.905801.31680HepG2SRSF7
SNHG17ENSG00000196756.7303.65920197.746800.618704.492503.82090HepG2SRSF9
SNHG17ENSG00000196756.7452.68140289.807300.643303.864402.54310HepG2STIP1
SNHG17ENSG00000196756.7188.62850274.48910-0.541202.022201.43070HepG2SUPV3L1
SNHG17ENSG00000196756.7283.09930200.742700.495902.622401.80820HepG2TIA1
SNHG17ENSG00000196756.7300.80290209.976400.518503.375102.76610HepG2TRIM56
SNHG17ENSG00000196756.7407.58990229.335000.829605.720304.83420HepG2U2AF1
SNHG17ENSG00000196756.7394.68730162.150201.2833012.9830011.36710HepG2UCHL5
SNHG17ENSG00000196756.7196.93170267.09390-0.439702.257501.61600HepG2UPF1
SNHG17ENSG00000196756.7409.36240251.352000.703603.437602.31290HepG2UPF2
SNHG17ENSG00000196756.7749.07040257.868901.5384035.7858033.99980HepG2UTP3
SNHG17ENSG00000196756.7359.66670223.800400.684303.485102.29530HepG2XRCC6
SNHG17ENSG00000196756.7384.93220270.204400.510502.443601.75810HepG2XRN2
SNHG17ENSG00000196756.7170.85030232.94110-0.447202.088701.49260HepG2ZC3H8
SNHG17ENSG00000196756.7521.67690293.752400.8285011.4458010.52010HepG2ZNF622
SNHG17ENSG00000196756.7747.66520343.870401.1204020.5923019.15590K562AGGF1
SNHG17ENSG00000196756.7495.15530377.828200.390102.157601.30250K562AKAP8
SNHG17ENSG00000196756.7723.21480357.804501.0152013.1180011.53950K562AKAP8L
SNHG17ENSG00000196756.75350.22230788.709302.7619050.1396047.93450K562AQR
SNHG17ENSG00000196756.7966.94830518.846800.8980014.3943013.02270K562DDX47
SNHG17ENSG00000196756.7544.74060385.074700.500304.164203.05840K562DKC1
SNHG17ENSG00000196756.7508.36830641.19400-0.334902.463601.77790K562EIF2S2
SNHG17ENSG00000196756.7405.80800248.562900.707103.321302.21080K562EIF3A
SNHG17ENSG00000196756.7518.79840240.708801.1078014.5407012.65960K562EIF3G
SNHG17ENSG00000196756.7722.86490336.493801.1030015.7926013.71280K562EIF4A3
SNHG17ENSG00000196756.71012.15040783.021900.370203.719802.63250K562EIF4G2
SNHG17ENSG00000196756.7618.28880349.939800.8211010.617309.51790K562FXR1
SNHG17ENSG00000196756.7130.87380214.60040-0.713502.994202.25450K562G3BP2
SNHG17ENSG00000196756.71047.33950854.490000.293502.076201.41460K562GRSF1
SNHG17ENSG00000196756.7513.19740326.801200.651004.635503.00020K562HNRNPK
SNHG17ENSG00000196756.7477.62550353.834900.432702.212301.38340K562HNRNPM
SNHG17ENSG00000196756.7445.10520560.02770-0.331402.188301.39540K562HNRNPU
SNHG17ENSG00000196756.7574.20720379.748700.596404.820303.67490K562KIF1C
SNHG17ENSG00000196756.7675.84490343.934900.9745013.1340011.19180K562MAGOH
SNHG17ENSG00000196756.7580.19940298.179400.960307.303405.61210K562NAA15
SNHG17ENSG00000196756.7496.44360305.983900.698105.777904.35430K562PCBP2
SNHG17ENSG00000196756.7227.52840440.89770-0.954407.706706.31870K562PCBP3
SNHG17ENSG00000196756.7208.42640338.19110-0.698304.663603.62290K562POLR2G
SNHG17ENSG00000196756.7565.27170409.974700.463302.686201.94750K562PRPF8
SNHG17ENSG00000196756.7572.45010334.167800.776505.530504.61910K562PTBP1
SNHG17ENSG00000196756.71162.99720854.340400.444903.912302.94660K562PUF60
SNHG17ENSG00000196756.7982.84340354.902501.4694025.6454023.99630K562PUS1
SNHG17ENSG00000196756.7642.03910345.750500.8928011.4704010.27870K562RBM15
SNHG17ENSG00000196756.7922.61760320.328401.5261030.7205027.73470K562RBM22
SNHG17ENSG00000196756.7676.39270417.556300.695805.006103.90330K562RPS19
SNHG17ENSG00000196756.7688.71560465.423500.565303.886802.92930K562SF3A3
SNHG17ENSG00000196756.7516.72270223.056601.2119017.5167015.20650K562SF3B4
SNHG17ENSG00000196756.7594.91880363.905400.709002.949701.66880K562SNRNP200
SNHG17ENSG00000196756.7594.00270476.835900.316902.351001.47940K562SRPK2
SNHG17ENSG00000196756.7350.62760499.27410-0.509904.228502.76110K562SRSF7
SNHG17ENSG00000196756.7540.90260331.525200.706205.983504.91500K562TARDBP
SNHG17ENSG00000196756.7327.68520207.916300.656203.545502.27210K562U2AF1
SNHG17ENSG00000196756.7802.31500214.765401.9013047.2259044.16630K562U2AF2
SNHG17ENSG00000196756.7252.15000420.06750-0.736305.238903.79660K562UCHL5
SNHG17ENSG00000196756.7606.26960445.013900.446004.411303.36050K562WDR43
SNHG17ENSG00000196756.7897.70740357.374401.3287010.309206.90360K562XRCC6
SNHG17ENSG00000196756.7580.59540888.69070-0.614102.556701.73350K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SNHG17 is not available on ENCORE database.





31 RBPs can affect the splicing of SNHG17 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESNHG17ENSG00000196756.7chr20-370545823705469637049652370508883705506137055146-0.182000.000760.01680excludedK562SF3B4
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.317000.000370.01737excludedK562PRPF8
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.482000.000000.00002excludedHepG2U2AF1
SESNHG17ENSG00000196756.7chr20-3705073837050888370496523704974537055061370551460.249000.000790.02599includedK562AKAP8L
SESNHG17ENSG00000196756.7chr20-370507333705088837049652370497453705506137055146-0.343000.000080.02870excludedHepG2ILF3
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.342000.000050.00219excludedHepG2HNRNPK
SESNHG17ENSG00000196756.7chr20-3705065837050888370496523704974537055061370551460.139000.012760.09842includedK562AQR
SESNHG17ENSG00000196756.7chr20-370545823705469637050733370508883705506137055146-0.186000.000000.00000excludedK562AQR
SESNHG17ENSG00000196756.7chr20-3705632237056409370550613705514637059683370597550.226000.001930.06475includedK562FXR1
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.288000.001490.08968excludedHepG2DDX3X
SESNHG17ENSG00000196756.7chr20-3705073837050888370496523704974537055061370551460.192000.002880.04040includedK562PUS1
SESNHG17ENSG00000196756.7chr20-370545823705469637050838370508883705506137055146-0.205000.000040.00102excludedK562PUS1
SESNHG17ENSG00000196756.7chr20-370507333705088837049652370497453705506137055146-0.318000.001400.07149excludedHepG2NCBP2
SESNHG17ENSG00000196756.7chr20-370545823705470037049652370497453705506137055146-0.173000.001700.07512excludedK562EFTUD2
SESNHG17ENSG00000196756.7chr20-370507333705088837049652370497453705506137055146-0.422000.001690.03435excludedK562U2AF1
SESNHG17ENSG00000196756.7chr20-3705073837050888370496523704974537055061370551460.317000.000100.02067includedK562HNRNPM
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.270000.001140.03392excludedHepG2SF3A3
SESNHG17ENSG00000196756.7chr20-370507333705088837049652370497453705506137055146-0.351000.000060.00794excludedHepG2IGF2BP3
SESNHG17ENSG00000196756.7chr20-370563223705640937055061370551463705968337059755-0.146000.001640.09545excludedHepG2TIAL1
SESNHG17ENSG00000196756.7chr20-3705632237056409370550613705514637059683370597550.647000.000010.00048includedK562U2AF2
SESNHG17ENSG00000196756.7chr20-370545823705469637049652370508883705506137055146-0.179000.001110.02181excludedK562U2AF2
SESNHG17ENSG00000196756.7chr20-370507333705088837049652370497453705506137055146-0.258000.001760.05779excludedK562TARDBP
SESNHG17ENSG00000196756.7chr20-370563223705640937055061370551463705968337059755-0.132000.000530.02335excludedK562HNRNPU
SESNHG17ENSG00000196756.7chr20-370507383705088837049652370497453705506137055146-0.270000.000060.00394excludedK562HNRNPU
SESNHG17ENSG00000196756.7chr20-3705073837050888370496523704974537055061370551460.222000.002470.05395includedK562RBM15
SESNHG17ENSG00000196756.7chr20-3705073837050888370496523704974537055061370551460.234000.000700.02079includedK562AGGF1
SESNHG17ENSG00000196756.7chr20-370563223705640937055061370551463705968337059755-0.151000.000740.08990excludedK562ZC3H8
SESNHG17ENSG00000196756.7chr20-3705632237056409370550613705514637059683370597550.493000.000080.00608includedK562HNRNPK
SESNHG17ENSG00000196756.7chr20-3705458237054696370496523705088837055061370551460.433000.000050.00320includedHepG2HNRNPC
SESNHG17ENSG00000196756.7chr20-370563223705640937055061370551463705968337059755-0.342000.000000.00178excludedK562EIF3G
SESNHG17ENSG00000196756.7chr20-3705458237054696370496523705088837055061370551460.550000.000000.00000includedK562HNRNPC
A3SSSNHG17ENSG00000196756.7chr20-3705506137055224370550613705514637059683370597830.112000.000810.00576longerK562AQR
A3SSSNHG17ENSG00000196756.7chr20-3705968337059888370596833705975537063146370632050.126000.000000.00002longerK562AQR
A5SSSNHG17ENSG00000196756.7chr20-3706366937063976370638393706397637063162370632690.177000.000870.01658longerK562AQR
A5SSSNHG17ENSG00000196756.7chr20-3706366937063976370638393706397637063146370632690.216000.001060.08303longerK562AGGF1
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.249000.001450.06563includedHepG2BCCIP
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.305000.000040.00043includedK562PUS1
RISNHG17ENSG00000196756.7chr20-370496523705088837049652370497453705073837050888-0.245000.004410.07594excludedK562SRSF1
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.326000.000180.01168includedK562HNRNPUL1
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.459000.000380.01141includedHepG2IGF2BP3
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.439000.000050.00325includedHepG2MATR3
RISNHG17ENSG00000196756.7chr20-370496523705088837049652370497453705073837050888-0.293000.000090.00338excludedK562RBM22
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.389000.000010.00019includedK562AKAP8L
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.381000.000000.00005includedK562RBM15
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.349000.001020.02401includedHepG2KHSRP
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.366000.001010.01428includedHepG2NCBP2
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.326000.003520.03744includedHepG2HNRNPK
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050738370508880.299000.000680.01038includedK562UTP18
RISNHG17ENSG00000196756.7chr20-370496523705088837049652370497453705065837050888-0.151000.008730.04766excludedK562AQR
RISNHG17ENSG00000196756.7chr20-3704965237050888370496523704974537050733370508880.279000.000960.03585includedK562TARDBP
MXESNHG17ENSG00000196756.7chr20-37049652370497453705073837050888370492343704954737055061370551460.087000.008850.057351includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705065837050888370545823705470037049652370497453705506137055146-0.077000.000000.000072includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705632237056409370631463706326937055061370551463706383937063916-0.222000.000180.001992includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705073837050777370545823705470037049652370497453705506137055146-0.190000.000560.005472includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705073337050888370545823705470037049652370497453705506137055146-0.056000.000020.000262includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3704999837050179370509363705101437049652370497453705506137055146-0.493000.016840.095982includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3704999837050179370507333705096337049652370497453705506137055146-0.146000.015660.090672includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3704999837050179370545823705470037049652370497453705506137055146-0.672000.000020.000302includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705073837050963370545823705470037049652370497453705506137055146-0.101000.000530.005282includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705074237050888370545823705470037049652370497453705506137055146-0.076000.000010.000102includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705073337050777370545823705470037049652370497453705506137055146-0.333000.004880.035202includedK562AQR
MXESNHG17ENSG00000196756.7chr20-3705073337050963370545823705470037049652370497453705506137055146-0.147000.001530.013182includedK562AQR
MXESNHG17ENSG00000196756.7chr20-37050733370508883705093637051014370496523704974537055061370551460.230000.022130.099641includedHepG2U2AF2
MXESNHG17ENSG00000196756.7chr20-37050738370508883705093637051014370496523704974537055061370551460.206000.018340.086921includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SNHG17 is not avaliable on ENCORE database.