The Knockdown/knockout RNA-Seq assay for RAB5A is not available on ENCORE database.
70 RBPs can affect the gene expression of RAB5A :
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
RAB5A | ENSG00000144566.6 | 515.88200 | 752.33070 | -0.54430 | 4.35430 | 3.13550 | HepG2 | ADAR | |
RAB5A | ENSG00000144566.6 | 1278.07810 | 1070.76540 | 0.25520 | 2.21060 | 1.58480 | HepG2 | AUH | |
RAB5A | ENSG00000144566.6 | 1486.68060 | 1046.46480 | 0.50650 | 6.39390 | 5.28350 | HepG2 | CALR | |
RAB5A | ENSG00000144566.6 | 783.01060 | 604.31520 | 0.37360 | 2.52810 | 1.87680 | HepG2 | DDX21 | |
RAB5A | ENSG00000144566.6 | 635.66920 | 483.67610 | 0.39410 | 2.76410 | 1.37610 | HepG2 | DDX28 | |
RAB5A | ENSG00000144566.6 | 1382.67430 | 1007.67630 | 0.45630 | 3.47340 | 2.78230 | HepG2 | DDX3X | |
RAB5A | ENSG00000144566.6 | 1645.92300 | 1148.74310 | 0.51870 | 2.46010 | 1.53880 | HepG2 | DDX59 | |
RAB5A | ENSG00000144566.6 | 1079.74290 | 832.13320 | 0.37570 | 2.41750 | 1.86170 | HepG2 | EIF2S1 | |
RAB5A | ENSG00000144566.6 | 1210.12620 | 895.41210 | 0.43440 | 2.33910 | 1.70410 | HepG2 | EIF4B | |
RAB5A | ENSG00000144566.6 | 1736.96860 | 1229.29940 | 0.49860 | 9.32220 | 8.32660 | HepG2 | ETF1 | |
RAB5A | ENSG00000144566.6 | 944.82510 | 748.43530 | 0.33610 | 2.55180 | 1.75010 | HepG2 | EWSR1 | |
RAB5A | ENSG00000144566.6 | 809.56470 | 575.88140 | 0.49130 | 4.25360 | 2.87960 | HepG2 | FASTKD2 | |
RAB5A | ENSG00000144566.6 | 759.50220 | 603.10320 | 0.33250 | 2.22450 | 1.51280 | HepG2 | FUBP3 | |
RAB5A | ENSG00000144566.6 | 1236.43870 | 992.69290 | 0.31670 | 2.81440 | 1.87430 | HepG2 | HNRNPA2B1 | |
RAB5A | ENSG00000144566.6 | 646.42550 | 850.71810 | -0.39620 | 2.80220 | 2.10490 | HepG2 | HNRNPC | |
RAB5A | ENSG00000144566.6 | 1435.41090 | 1094.39740 | 0.39120 | 2.65370 | 2.03510 | HepG2 | HNRNPLL | |
RAB5A | ENSG00000144566.6 | 622.94790 | 845.09360 | -0.44000 | 5.13760 | 4.33240 | HepG2 | HNRNPU | |
RAB5A | ENSG00000144566.6 | 733.31060 | 933.44050 | -0.34810 | 1.86260 | 1.33970 | HepG2 | MATR3 | |
RAB5A | ENSG00000144566.6 | 617.38910 | 753.75560 | -0.28790 | 2.14470 | 1.48760 | HepG2 | PPIL4 | |
RAB5A | ENSG00000144566.6 | 653.68720 | 492.61350 | 0.40800 | 2.82370 | 2.00610 | HepG2 | PRPF8 | |
RAB5A | ENSG00000144566.6 | 1561.76410 | 1027.48410 | 0.60400 | 10.47430 | 9.60950 | HepG2 | RBM22 | |
RAB5A | ENSG00000144566.6 | 1233.08710 | 844.63420 | 0.54580 | 6.52880 | 5.53300 | HepG2 | RBM25 | |
RAB5A | ENSG00000144566.6 | 647.45030 | 487.32430 | 0.40980 | 2.65760 | 1.88550 | HepG2 | RRP9 | |
RAB5A | ENSG00000144566.6 | 1511.98160 | 1129.16180 | 0.42110 | 2.53310 | 1.88800 | HepG2 | SF3A3 | |
RAB5A | ENSG00000144566.6 | 648.11310 | 1083.27100 | -0.74110 | 8.77320 | 7.58590 | HepG2 | SF3B1 | |
RAB5A | ENSG00000144566.6 | 2310.66140 | 1160.53580 | 0.99340 | 39.71210 | 38.38990 | HepG2 | SRFBP1 | |
RAB5A | ENSG00000144566.6 | 1129.97310 | 933.83690 | 0.27490 | 2.81090 | 2.33480 | HepG2 | SRSF1 | |
RAB5A | ENSG00000144566.6 | 918.22790 | 635.41580 | 0.53110 | 4.47450 | 3.64580 | HepG2 | SUPV3L1 | |
RAB5A | ENSG00000144566.6 | 1023.93060 | 771.24790 | 0.40880 | 4.01820 | 3.01680 | HepG2 | TIA1 | |
RAB5A | ENSG00000144566.6 | 679.33110 | 821.15980 | -0.27350 | 1.86990 | 1.44130 | HepG2 | TIAL1 | |
RAB5A | ENSG00000144566.6 | 1224.70210 | 937.15990 | 0.38600 | 2.90490 | 2.26200 | HepG2 | U2AF1 | |
RAB5A | ENSG00000144566.6 | 771.38590 | 648.36810 | 0.25050 | 1.94480 | 1.36660 | HepG2 | ZC3H8 | |
RAB5A | ENSG00000144566.6 | 1290.39140 | 1101.34180 | 0.22840 | 2.53930 | 2.00930 | HepG2 | ZNF622 | |
RAB5A | ENSG00000144566.6 | 1670.90910 | 1316.83050 | 0.34350 | 2.67390 | 1.51450 | K562 | AARS | |
RAB5A | ENSG00000144566.6 | 3463.32450 | 2597.65690 | 0.41480 | 7.81350 | 6.92870 | K562 | AGGF1 | |
RAB5A | ENSG00000144566.6 | 3653.06760 | 2854.55920 | 0.35570 | 2.74230 | 1.76610 | K562 | AKAP8 | |
RAB5A | ENSG00000144566.6 | 3602.11200 | 2703.01100 | 0.41420 | 4.99820 | 4.10900 | K562 | AKAP8L | |
RAB5A | ENSG00000144566.6 | 1548.06780 | 2493.60720 | -0.68780 | 12.71300 | 10.11500 | K562 | APOBEC3C | |
RAB5A | ENSG00000144566.6 | 3460.87090 | 2175.85460 | 0.66950 | 10.70800 | 9.66540 | K562 | AQR | |
RAB5A | ENSG00000144566.6 | 3686.22290 | 2836.16820 | 0.37810 | 6.34200 | 4.88930 | K562 | ATP5C1 | |
RAB5A | ENSG00000144566.6 | 2892.22680 | 1829.82820 | 0.66040 | 8.90260 | 7.28150 | K562 | BOP1 | |
RAB5A | ENSG00000144566.6 | 3877.55860 | 3104.24110 | 0.32080 | 3.99240 | 2.53990 | K562 | CCDC124 | |
RAB5A | ENSG00000144566.6 | 4681.57230 | 3475.29180 | 0.42980 | 6.51960 | 5.03670 | K562 | CELF1 | |
RAB5A | ENSG00000144566.6 | 3771.54840 | 2738.48600 | 0.46170 | 10.64740 | 9.46360 | K562 | DDX47 | |
RAB5A | ENSG00000144566.6 | 963.16120 | 731.72220 | 0.39640 | 2.90950 | 1.52680 | K562 | DNAJC21 | |
RAB5A | ENSG00000144566.6 | 1691.94370 | 1440.32410 | 0.23220 | 2.25210 | 1.59350 | K562 | EIF2S2 | |
RAB5A | ENSG00000144566.6 | 1012.13170 | 692.14350 | 0.54820 | 2.81820 | 1.80420 | K562 | EIF3A | |
RAB5A | ENSG00000144566.6 | 1467.85210 | 1046.27530 | 0.48830 | 3.65780 | 2.45290 | K562 | EIF3D | |
RAB5A | ENSG00000144566.6 | 1808.16370 | 1403.08500 | 0.36580 | 3.23510 | 1.49950 | K562 | FASTKD2 | |
RAB5A | ENSG00000144566.6 | 2477.43200 | 1979.68380 | 0.32350 | 2.67710 | 1.83670 | K562 | FMR1 | |
RAB5A | ENSG00000144566.6 | 1541.40870 | 1159.43680 | 0.41070 | 4.36580 | 2.63490 | K562 | FUS | |
RAB5A | ENSG00000144566.6 | 3174.51200 | 2016.04510 | 0.65490 | 3.85570 | 2.98930 | K562 | G3BP2 | |
RAB5A | ENSG00000144566.6 | 2291.08840 | 1857.50640 | 0.30260 | 2.54890 | 1.78500 | K562 | GPKOW | |
RAB5A | ENSG00000144566.6 | 3710.53620 | 2333.36770 | 0.66910 | 3.02260 | 1.73090 | K562 | HNRNPA2B1 | |
RAB5A | ENSG00000144566.6 | 1158.52890 | 1441.31390 | -0.31510 | 2.51040 | 1.93900 | K562 | HNRNPC | |
RAB5A | ENSG00000144566.6 | 4017.25350 | 2868.46080 | 0.48580 | 5.70260 | 4.42150 | K562 | KIF1C | |
RAB5A | ENSG00000144566.6 | 2409.96260 | 1586.19080 | 0.60330 | 5.16060 | 3.83270 | K562 | KRR1 | |
RAB5A | ENSG00000144566.6 | 3398.09500 | 2745.91160 | 0.30730 | 2.86180 | 1.76490 | K562 | MAK16 | |
RAB5A | ENSG00000144566.6 | 1399.57020 | 2005.32880 | -0.51890 | 4.23010 | 3.06840 | K562 | MATR3 | |
RAB5A | ENSG00000144566.6 | 3306.67510 | 2252.38150 | 0.55380 | 2.78310 | 1.89640 | K562 | NAA15 | |
RAB5A | ENSG00000144566.6 | 2352.64840 | 1730.79950 | 0.44270 | 6.26710 | 4.44820 | K562 | NCBP2 | |
RAB5A | ENSG00000144566.6 | 4225.41680 | 3091.40710 | 0.45070 | 3.76580 | 2.00730 | K562 | NOL12 | |
RAB5A | ENSG00000144566.6 | 1406.24730 | 950.82900 | 0.56450 | 5.79660 | 4.70830 | K562 | PRPF8 | |
RAB5A | ENSG00000144566.6 | 4617.38410 | 3083.39890 | 0.58250 | 7.85130 | 6.46770 | K562 | PUF60 | |
RAB5A | ENSG00000144566.6 | 3713.88320 | 2680.42220 | 0.47040 | 5.27770 | 4.55900 | K562 | PUS1 | |
RAB5A | ENSG00000144566.6 | 3391.64900 | 2611.85240 | 0.37680 | 5.98830 | 5.14220 | K562 | RBM15 | |
RAB5A | ENSG00000144566.6 | 1776.78270 | 968.59630 | 0.87520 | 9.75820 | 8.20820 | K562 | RPS19 | |
RAB5A | ENSG00000144566.6 | 1319.28450 | 972.25920 | 0.44020 | 2.67140 | 1.36610 | K562 | RRP9 | |
RAB5A | ENSG00000144566.6 | 2586.14400 | 1944.05150 | 0.41160 | 7.04170 | 5.78490 | K562 | SF3A3 | |
RAB5A | ENSG00000144566.6 | 1278.90000 | 1694.65610 | -0.40610 | 4.17670 | 2.84180 | K562 | SRSF4 | |
RAB5A | ENSG00000144566.6 | 2920.65190 | 2065.30010 | 0.49980 | 4.90290 | 3.15730 | K562 | STAU1 | |
RAB5A | ENSG00000144566.6 | 1360.84660 | 920.73310 | 0.56350 | 5.08910 | 3.67500 | K562 | SUPV3L1 | |
RAB5A | ENSG00000144566.6 | 2190.95290 | 1829.46760 | 0.26000 | 3.15650 | 1.79490 | K562 | TROVE2 | |
RAB5A | ENSG00000144566.6 | 2638.98780 | 1953.22530 | 0.43400 | 2.28600 | 1.30470 | K562 | U2AF1 | |
RAB5A | ENSG00000144566.6 | 2899.23200 | 2017.57640 | 0.52290 | 8.56760 | 7.14090 | K562 | U2AF2 | |
RAB5A | ENSG00000144566.6 | 2543.01090 | 2088.96260 | 0.28370 | 4.24550 | 3.37420 | K562 | UPF1 | |
RAB5A | ENSG00000144566.6 | 2501.27140 | 1858.77340 | 0.42820 | 9.43870 | 7.97420 | K562 | WDR43 | |
RAB5A | ENSG00000144566.6 | 3140.78050 | 2578.45870 | 0.28450 | 2.68050 | 1.41580 | K562 | WRN | |
RAB5A | ENSG00000144566.6 | 4251.76510 | 2521.76550 | 0.75350 | 3.53010 | 1.65210 | K562 | YTHDC2 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for RAB5A is not available on ENCORE database.
2 RBPs can affect the splicing of RAB5A :
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
SE | RAB5A | ENSG00000144566.6 | chr3 | + | 20012039 | 20012209 | | | 19992297 | 19992553 | 20017092 | 20017244 | 0.08000 | 0.00062 | 0.01374 | included | HepG2 | U2AF1 | |
SE | RAB5A | ENSG00000144566.6 | chr3 | + | 20012039 | 20012209 | | | 19992297 | 19992553 | 20017092 | 20017244 | 0.12000 | 0.00000 | 0.00000 | included | K562 | AQR | |
SE | RAB5A | ENSG00000144566.6 | chr3 | + | 20012039 | 20012209 | | | 19992297 | 19992553 | 20017092 | 20017244 | 0.05200 | 0.00000 | 0.00006 | included | K562 | U2AF1 | |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
The Knockdown/knockout RNA-Seq assay for RAB5A is not avaliable on ENCORE database.