PRPF3

General Information

Gene Name       : PRPF3
Gene ID             : ENSG00000117360.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: PRPF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PRPF3ENSG00000117360.1249.4745.9447.70ENCSR000AEF
HepG2PRPF3ENSG00000117360.1228.9339.2034.06ENCSR985KAT
K562PRPF3ENSG00000117360.1244.7645.2144.98ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
knockdown followed by RNA-seq PRPF3-BGKcLV23-K562ENCSR681ELFPRPF3K562ReleasedENCSR877JEM   CRISPRKD% = 63.4,65.7
knockdown followed by RNA-seq PRPF3-BGHcLV22-HepG2ENCSR909TFJPRPF3HepG2ReleasedENCSR704VPL   CRISPRKD% = 58.5,61.4






  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
PRPF3ENCAB940XJCA302-073A2BGHcLV22-39, Released, ENCODE4BGKcLV23-55, Released, ENCODE4


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
PRPF3K562CRISPRBGKcLV21-35,BGKcLV21-36BGKcLV21-1,BGKcLV21-20.0,0.0NotSatisfiedENCODE4
PRPF3K562CRISPRENCSR681ELFENCSR877JEMPRPF3-BGKcLV23-55,PRPF3-BGKcLV23-56NT-BGKcLV23-1,NT-BGKcLV23-263.4,65.7ReleasedENCODE4
PRPF3HepG2CRISPRENCSR909TFJENCSR704VPLPRPF3-BGHcLV22-39,PRPF3-BGHcLV22-40NT-BGHcLV22-1,NT-BGHcLV22-258.5,61.4ReleasedENCODE4
PRPF3HepG2CRISPRBGHcLV22-41,BGHcLV22-42BGHcLV22-1,BGHcLV22-20.0,0.0NotSatisfiedENCODE4


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
PRPF3Product_ID: A302-073A
Lot_ID: 2
Source: Bethyl Labs
Target Name: PRPF3-human		 PRPF3-HEPG2-CRISPR-A302-073A.png<br>Caption: Western blot following CRISPR against PRPF3 in HepG2 whole cell lysate using PRPF3 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PRPF3. PRPF3 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
 PRPF3-K562-CRISPR-A302-073A.png<br>Caption: Western blot following CRISPR against PRPF3 in K562 whole cell lysate using PRPF3 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against PRPF3. PRPF3 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.








RNA Targets

  • eCLIP assay for PRPF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PRPF3 RNA is bound by 26 proteins.  







eCLIP assay for PRPF3 is not avaliable on ENCORE database.





26 proteins are bound to PRPF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1150312917150313009+3'-UTR,CDS,intron-Proximal3.038055.23086K562PRPF8
chr1150312925150312989+3'-UTR,CDS,intron-Proximal3.996513.71591HepG2PRPF8
chr1150325472150325528+3'-UTR3.909303.14668HepG2LSM11
chr1150325528150325584+3'-UTR4.092234.04268HepG2LSM11
chr1150316899150316941+3'-UTR,CDS,intron-Proximal3.340526.36421K562ZNF622
chr1150316901150316943+3'-UTR,CDS,intron-Proximal3.433095.91739K562UCHL5
chr1150316990150317066+3'-UTR,CDS,intron-Proximal4.214347.26133HepG2PRPF8
chr1150325583150325653+3'-UTR3.635036.24385K562PUM2
chr1150315882150315923+3'-UTR,CDS4.785226.44794K562UCHL5
chr1150318500150318610+3'-UTR,CDS3.071698.07181K562ZNF622
chr1150316901150316959+3'-UTR,CDS,intron-Proximal4.556585.11007HepG2GRWD1
chr1150325515150325578+3'-UTR3.980307.50845HepG2GRWD1
chr1150316664150316722+3'-UTR,CDS3.462045.31167HepG2GRWD1
chr1150325535150325587+3'-UTR4.0395310.43661K562PABPC4
chr1150316998150317068+3'-UTR,CDS,intron-Proximal3.738343.88924K562PRPF8
chr1150316991150317053+3'-UTR,CDS,intron-Proximal3.430566.19339HepG2BCLAF1
chr1150318496150318608+3'-UTR,CDS3.251357.04499HepG2GRWD1
chr1150316651150316697+3'-UTR,CDS3.567376.44455K562ZNF622
chr1150318502150318613+3'-UTR,CDS,intron-Proximal3.136098.07199HepG2BCLAF1
chr1150298218150298323+5'-UTR,CDS3.362559.64262HepG2BCLAF1
chr1150297358150297413+5'-UTR,CDS3.587048.63117K562ZNF622
chr1150297413150297494+5'-UTR,CDS3.175739.94218K562ZNF622
chr1150297454150297546+5'-UTR,CDS,intron-Proximal4.074975.35382K562ZNF800
chr1150297516150297544+5'-UTR,CDS4.399664.69889HepG2GRWD1
chr1150297541150297590+5'-UTR,CDS,intron-Proximal5.514317.28294K562AQR
chr1150297356150297462+5'-UTR,CDS3.3420111.29985K562UCHL5
chr1150297468150297516+5'-UTR,CDS4.796436.33775HepG2GRWD1
chr1150300817150300903+5'-UTR,CDS,intron-Distal3.1923210.93472K562ZNF622
chr1150294038150294099+5'-UTR,intron-Proximal3.706364.23459K562PRPF8
chr1150297477150297544+5'-UTR,CDS3.652307.89260HepG2BCLAF1
chr1150300823150300921+5'-UTR,CDS,intron-Distal3.408255.77687HepG2PPIG
chr1150297462150297537+5'-UTR,CDS3.739579.97367K562UCHL5
chr1150297484150297546+5'-UTR,CDS,intron-Proximal3.628059.24221K562DDX24
chr1150298209150298308+5'-UTR,CDS3.628679.66295HepG2GRWD1
chr1150300751150300811+5'-UTR,CDS,intron-Distal,intron-Proximal3.910864.79983HepG2U2AF2
chr1150297504150297541+5'-UTR,CDS5.4192610.17900K562ZNF622
chr1150300811150300915+5'-UTR,CDS,intron-Distal3.8203610.51189HepG2GRWD1
chr1150298208150298312+5'-UTR,CDS,intron-Proximal3.7785515.06963K562DDX24
chr1150300722150300792+5'-UTR,CDS,intron-Distal,intron-Proximal5.448426.40247K562SF3B4
chr1150300899150300968+5'-UTR,CDS,intron-Distal,intron-Proximal3.933745.06115HepG2PRPF8
chr1150297424150297554+5'-UTR,CDS,intron-Proximal3.3335111.04639HepG2PPIG
chr1150298222150298322+5'-UTR,CDS3.080603.20367K562RBM15
chr1150294040150294064+5'-UTR,intron-Proximal3.370154.41130K562AQR
chr1150305568150305630+CDS3.9630810.17809K562ZNF622
chr1150325345150325396+CDS4.051116.81811K562UCHL5
chr1150321646150321676+CDS4.789116.29310K562ZNF622
chr1150310655150310737+CDS3.033766.91015HepG2GRWD1
chr1150307456150307498+CDS3.381335.39278K562ZNF622
chr1150305222150305282+CDS,intron-Proximal5.6882710.48996K562AQR
chr1150310663150310734+CDS4.266395.29232K562GRWD1
chr1150305508150305572+CDS3.135855.00905HepG2BCLAF1
chr1150321630150321693+CDS,intron-Proximal5.6934011.70549K562UCHL5
chr1150305214150305238+CDS4.308005.23082K562DDX24
chr1150318829150318891+CDS,intron-Proximal3.693166.71722K562SF3B4
chr1150307661150307709+CDS3.190914.87883K562BUD13
chr1150310633150310740+CDS,intron-Proximal3.090066.95241K562DDX24
chr1150310661150310739+CDS4.181479.52225K562UCHL5
chr1150318881150318918+CDS,intron-Proximal3.781797.13692K562ZNF622
chr1150305446150305534+CDS,intron-Proximal3.769397.89918K562DDX24
chr1150307605150307649+CDS3.950306.46803K562UCHL5
chr1150318827150318911+CDS,intron-Proximal3.165963.05149K562SMNDC1
chr1150305551150305612+CDS3.138483.73413HepG2PPIG
chr1150310681150310736+CDS3.7346511.70058K562ZNF622
chr1150305511150305567+CDS4.306216.81811K562UCHL5
chr1150321586150321691+CDS,intron-Proximal3.443437.49660K562SF3B4
chr1150318607150318713+CDS,intron-Distal,intron-Proximal3.091923.16738HepG2KHSRP
chr1150307657150307714+CDS,intron-Proximal3.063898.78789K562ZNF622
chr1150325348150325384+CDS4.291073.89826HepG2BCLAF1
chr1150310635150310661+CDS,intron-Proximal3.209824.59873K562UCHL5
chr1150294279150294398+intron-Distal4.469397.44508K562PRPF8
chr1150302549150302642+intron-Distal3.059503.45912HepG2HNRNPC
chr1150319842150319900+intron-Distal5.4363120.78863K562AGGF1
chr1150319709150319772+intron-Distal4.5468224.67409HepG2HNRNPL
chr1150317122150317153+intron-Distal,intron-Proximal3.214333.35377HepG2QKI
chr1150317558150317568+intron-Distal4.880198.57760K562KHSRP
chr1150319900150319953+intron-Distal4.5881517.60717K562AGGF1
chr1150321307150321347+intron-Distal3.725906.74745K562AGGF1
chr1150319738150319869+intron-Distal3.932925.61110HepG2GTF2F1
chr1150317568150317608+intron-Distal4.4917212.68814K562KHSRP
chr1150319813150319849+intron-Distal5.1574718.60858HepG2HNRNPL
chr1150317608150317626+intron-Distal4.189049.29751K562KHSRP
chr1150319908150319940+intron-Distal4.134423.59673K562HNRNPL
chr1150318626150318723+intron-Distal,intron-Proximal3.0323314.80405K562KHSRP
chr1150319796150319813+intron-Distal5.1571021.88867HepG2HNRNPL
chr1150319786150319796+intron-Distal4.5385220.47791HepG2HNRNPL
chr1150300134150300188+intron-Distal,intron-Proximal3.793824.71867K562TIA1
chr1150319718150319842+intron-Distal4.1171539.95964K562AGGF1
chr1150317542150317558+intron-Distal3.9390012.08764K562KHSRP
chr1150313654150313730+intron-Distal3.837683.06194K562ILF3
chr1150317627150317662+intron-Distal4.955467.47576K562KHSRP
chr1150320338150320367+intron-Distal3.870186.33179K562AGGF1
chr1150317507150317520+intron-Distal3.447586.59733K562KHSRP
chr1150319730150319894+intron-Distal4.5259023.51264K562HNRNPL
chr1150319739150319854+intron-Distal4.067424.40053K562GTF2F1
chr1150317520150317542+intron-Distal3.120155.17040K562KHSRP
chr1150317068150317096+intron-Proximal5.5090511.15144HepG2QKI
chr1150318971150319056+intron-Proximal4.206174.61288HepG2PRPF4
chr1150317096150317122+intron-Proximal5.330008.68064HepG2QKI
chr1150318990150319065+intron-Proximal4.341634.46189K562GTF2F1
chr1150294064150294084+intron-Proximal5.027316.44303K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PRPF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PRPF3 is not available on ENCORE database.

  • 74 RBPs can affect the levels of PRPF3.  








The Knockdown/knockout RNA-Seq assay for PRPF3 is not available on ENCORE database.





74 RBPs can affect the gene expression of PRPF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PRPF3ENSG00000117360.81219.34180861.298500.501405.594904.79040HepG2ACO1
PRPF3ENSG00000117360.81364.131801098.437300.312403.435502.68530HepG2AUH
PRPF3ENSG00000117360.8902.870001110.77990-0.299001.961001.44960HepG2BOP1
PRPF3ENSG00000117360.82425.59080860.973501.4942053.5756051.53150HepG2CKAP4
PRPF3ENSG00000117360.8774.463201019.76910-0.397002.790502.10050HepG2CPSF6
PRPF3ENSG00000117360.81077.594901259.50300-0.225002.185301.51490HepG2DAZAP1
PRPF3ENSG00000117360.8597.95300782.09150-0.387303.387702.10360HepG2DDX1
PRPF3ENSG00000117360.8630.69830974.35610-0.627505.390604.54410HepG2DDX3X
PRPF3ENSG00000117360.8552.71650766.89790-0.472504.892903.98130HepG2DNAJC21
PRPF3ENSG00000117360.81053.02010624.225100.754308.464306.52450HepG2EFTUD2
PRPF3ENSG00000117360.81904.340101242.612600.6158013.6613012.08380HepG2EIF4G1
PRPF3ENSG00000117360.8867.436801190.33700-0.456503.836302.88810HepG2EIF4G2
PRPF3ENSG00000117360.81602.293801261.194800.345204.449503.71990HepG2ETF1
PRPF3ENSG00000117360.81162.73320619.611100.9080014.1535012.43450HepG2FUBP3
PRPF3ENSG00000117360.8887.450501156.02230-0.381402.367801.77200HepG2GPKOW
PRPF3ENSG00000117360.8835.186201147.29830-0.458107.058406.02710HepG2HNRNPL
PRPF3ENSG00000117360.8805.557201103.21030-0.453603.458302.76350HepG2HNRNPLL
PRPF3ENSG00000117360.8852.187301063.36230-0.319402.655701.94520HepG2IGF2BP1
PRPF3ENSG00000117360.8589.99600794.63470-0.429602.396701.30320HepG2KHDRBS1
PRPF3ENSG00000117360.8618.39760787.24910-0.348303.647002.47590HepG2KIF1C
PRPF3ENSG00000117360.81151.67770902.425300.351802.036301.49010HepG2MATR3
PRPF3ENSG00000117360.82067.71570853.570101.2764015.7164013.55800HepG2PCBP2
PRPF3ENSG00000117360.8534.77160763.03370-0.512805.598604.58250HepG2PPIL4
PRPF3ENSG00000117360.81234.82100816.510500.5967010.063108.72310HepG2PRPF4
PRPF3ENSG00000117360.81095.23860578.006600.9220011.199509.72890HepG2PRPF8
PRPF3ENSG00000117360.8762.01610917.03180-0.267201.855601.32880HepG2QKI
PRPF3ENSG00000117360.81178.49010823.928200.516202.246501.60640HepG2RAVER1
PRPF3ENSG00000117360.81714.441001054.116700.7016013.8479012.86580HepG2RBM22
PRPF3ENSG00000117360.81426.81930571.770601.3192020.6098018.83840HepG2RRP9
PRPF3ENSG00000117360.8575.12620761.86480-0.405704.316603.54380HepG2SAFB2
PRPF3ENSG00000117360.83742.335301222.465301.6140029.1030026.86600HepG2SF3A3
PRPF3ENSG00000117360.81436.316401091.980200.395303.315002.54940HepG2SF3B1
PRPF3ENSG00000117360.81321.34330881.562000.5838010.051509.02860HepG2SF3B4
PRPF3ENSG00000117360.8924.828601143.17820-0.305803.471402.70070HepG2SLBP
PRPF3ENSG00000117360.81388.037201190.570700.221302.073601.62010HepG2SRFBP1
PRPF3ENSG00000117360.81161.73500920.173200.336203.762003.23220HepG2SRSF1
PRPF3ENSG00000117360.8901.463101174.91770-0.382202.181101.30310HepG2SRSF3
PRPF3ENSG00000117360.8908.185401060.93960-0.224301.968701.37080HepG2SRSF7
PRPF3ENSG00000117360.8827.932801075.19660-0.377002.671801.95790HepG2TARDBP
PRPF3ENSG00000117360.8583.87130838.69610-0.522506.937206.11430HepG2TRIM56
PRPF3ENSG00000117360.8921.181701164.76780-0.338502.712501.84810HepG2TUFM
PRPF3ENSG00000117360.81428.98750989.775500.529704.875804.05470HepG2U2AF1
PRPF3ENSG00000117360.81875.656301015.620000.884902.580701.62910HepG2U2AF2
PRPF3ENSG00000117360.81456.833301046.695000.476907.694206.77630HepG2UTP3
PRPF3ENSG00000117360.8983.40970805.803600.287302.895502.21110HepG2ZC3H8
PRPF3ENSG00000117360.82430.315401677.535100.5347012.2607011.15960K562AGGF1
PRPF3ENSG00000117360.82248.543401745.556300.365203.596202.84750K562AKAP8L
PRPF3ENSG00000117360.87185.353502074.574701.7921072.4423069.80610K562AQR
PRPF3ENSG00000117360.82142.290701831.518200.226002.226201.41520K562ATP5C1
PRPF3ENSG00000117360.8913.969201134.56400-0.311903.254202.21160K562BCLAF1
PRPF3ENSG00000117360.82548.773501834.431600.474404.308102.47240K562BUD13
PRPF3ENSG00000117360.84241.112202253.384800.9122037.9721035.83670K562DDX47
PRPF3ENSG00000117360.82375.237101878.312300.338504.749103.55150K562DKC1
PRPF3ENSG00000117360.82925.918201058.668601.4665039.3942035.84910K562EFTUD2
PRPF3ENSG00000117360.81098.15990723.874300.601203.276302.17320K562EIF3A
PRPF3ENSG00000117360.81769.171001133.690400.641903.662302.45630K562EIF3D
PRPF3ENSG00000117360.81353.114101038.119800.382203.258002.37030K562EIF4A3
PRPF3ENSG00000117360.81509.835001079.598500.483807.207206.29340K562FXR1
PRPF3ENSG00000117360.81772.402201231.152300.525606.778205.88370K562HNRNPC
PRPF3ENSG00000117360.8810.133601173.71770-0.534904.713703.06220K562HNRNPK
PRPF3ENSG00000117360.81608.861302036.46940-0.340003.279502.11720K562HNRNPL
PRPF3ENSG00000117360.82499.273501852.454000.432005.264204.05120K562KIF1C
PRPF3ENSG00000117360.81709.699501235.050200.469105.555504.35200K562MAGOH
PRPF3ENSG00000117360.82222.601801773.268500.325702.766901.69080K562MAK16
PRPF3ENSG00000117360.82818.424102075.218800.441504.650603.40780K562MBNL1
PRPF3ENSG00000117360.82242.807801454.579700.624603.407802.40860K562NAA15
PRPF3ENSG00000117360.83085.269001098.898301.4892046.8183043.21760K562PCBP2
PRPF3ENSG00000117360.83477.919201030.201901.7552055.9293052.83800K562PRPF8
PRPF3ENSG00000117360.84048.563603006.424000.429304.899803.81840K562PUF60
PRPF3ENSG00000117360.82885.070601731.077300.7368011.2733010.22640K562PUS1
PRPF3ENSG00000117360.82520.864601686.703600.579609.674708.59110K562RBM15
PRPF3ENSG00000117360.81978.961501150.612800.7822012.5168010.53160K562RBM22
PRPF3ENSG00000117360.8701.478401006.93290-0.521505.340603.95480K562RCC2
PRPF3ENSG00000117360.82916.387201049.505101.4744031.7633029.09740K562RPS19
PRPF3ENSG00000117360.82948.594001400.722601.073806.105004.10330K562SF1
PRPF3ENSG00000117360.82600.875101832.928400.504709.722708.26370K562SF3A3
PRPF3ENSG00000117360.82036.860201486.385800.454403.586902.47230K562SF3B1
PRPF3ENSG00000117360.82110.806801242.596000.7643015.7047013.54380K562SF3B4
PRPF3ENSG00000117360.83553.436401608.736801.143207.324904.97300K562SNRNP200
PRPF3ENSG00000117360.82140.386601176.320500.8635018.0189016.23920K562SRSF1
PRPF3ENSG00000117360.81834.815601441.882600.347602.894302.05380K562SYNCRIP
PRPF3ENSG00000117360.8937.100501190.52560-0.345302.423901.75910K562TARDBP
PRPF3ENSG00000117360.8863.278201127.75120-0.385602.990001.99890K562TRIM56
PRPF3ENSG00000117360.81765.516901158.272800.608005.811704.10490K562U2AF1
PRPF3ENSG00000117360.82032.021701196.389700.7641015.3535013.43220K562U2AF2
PRPF3ENSG00000117360.8710.608201055.81470-0.571204.977203.56720K562UCHL5
PRPF3ENSG00000117360.82142.955801752.521200.290104.490603.43060K562WDR43
PRPF3ENSG00000117360.8821.388001074.93330-0.388102.535801.39310K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PRPF3 is not available on ENCORE database.





22 RBPs can affect the splicing of PRPF3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.159000.000130.01815includedHepG2G3BP1
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.109000.000000.00000excludedK562SRSF1
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.069000.000130.00716excludedK562PRPF8
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.088000.000630.04253excludedHepG2RBM22
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.083000.000010.03491includedK562IGF2BP1
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.664000.000000.00000includedHepG2HNRNPK
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.123000.000130.01542includedHepG2TBRG4
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.063000.000000.00005excludedHepG2U2AF2
SEPRPF3ENSG00000117360.8chr1+150315784150315965150312782150312953150316637150316737-0.056000.006950.06091excludedK562AQR
SEPRPF3ENSG00000117360.8chr1+150318852150318967150316909150317023150321632150321679-0.087000.000090.00157excludedK562AQR
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.124000.000780.04695includedHepG2NCBP2
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.109000.000540.03798includedHepG2FTO
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.077000.000010.00179excludedK562EFTUD2
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.079000.001060.02672excludedHepG2SRSF1
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.077000.000010.00040excludedHepG2SF3A3
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.246000.000000.00080includedHepG2IGF2BP3
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.115000.000190.01942includedHepG2TIAL1
SEPRPF3ENSG00000117360.8chr1+150318883150318967150318493150318612150321632150321694-0.085000.000170.00464excludedK562U2AF2
SEPRPF3ENSG00000117360.8chr1+150318493150318612150316909150317023150318883150318977-0.065000.001950.06266excludedK562TARDBP
SEPRPF3ENSG00000117360.8chr1+150300015150300111150298208150298339150300778150300925-0.076000.000180.00984excludedK562HNRNPU
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.208000.000380.02162includedK562HNRNPK
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.140000.000070.00417includedHepG2HNRNPC
SEPRPF3ENSG00000117360.8chr1+1503000151503001111502982081502983391503007781503009250.177000.000240.04000includedHepG2KHSRP
A3SSPRPF3ENSG00000117360.8chr1+1503188521503189771503188831503189771503184671503186120.057000.000000.00000longerK562AQR
A3SSPRPF3ENSG00000117360.8chr1+1503216191503216941503216321503216941503188221503189670.158000.000000.00000longerK562AQR
A3SSPRPF3ENSG00000117360.8chr1+150297352150297545150297415150297545150293927150294041-0.250000.000120.00630shorterHepG2U2AF1
MXEPRPF3ENSG00000117360.8chr1+1503184931503186121503188831503189671503169091503170231503216321503216940.149000.003870.054341includedK562U2AF1
MXEPRPF3ENSG00000117360.8chr1+1503188521503189771503216191503216941503184671503186121503253081503256710.061000.000070.000841includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503188521503189771503214971503216941503184671503186121503253081503256710.061000.000160.001871includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184671503186121503188521503189771503169091503170231503216321503216940.557000.012200.074311includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184671503186121503188831503189771503169091503170231503216321503216940.506000.004610.033491includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503188521503189671503216191503216941503184671503186121503253081503256080.067000.000020.000281includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503188521503189671503214971503216941503184671503186121503253081503256080.068000.000050.000661includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184931503186121503188831503189671503168511503170231503216321503216940.116000.001010.009201includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184931503186121503188521503189671503169091503170231503216321503216940.108000.002170.017841includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184421503186121503188521503189771503169091503170231503216321503216940.563000.014150.083591includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184421503186121503188831503189771503169091503170231503216321503216940.535000.005410.038441includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318977150321632150321694150318493150318612150325308150325671-0.119000.001180.010602includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318977150321619150321694150318467150318612150325308150325671-0.136000.000170.001972includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318977150321497150321694150318467150318612150325308150325671-0.155000.000010.000182includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318967150321632150321694150318493150318612150325308150325671-0.114000.001800.015162includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318967150321619150321694150318467150318612150325308150325671-0.131000.000280.003022includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+150318883150318967150321497150321694150318467150318612150325308150325671-0.151000.000020.000302includedK562AQR
MXEPRPF3ENSG00000117360.8chr1+1503184931503186121503188831503189671503169091503170231503216321503216940.116000.010470.095341includedK562U2AF2
MXEPRPF3ENSG00000117360.8chr1+1503184461503186121503188831503189671503169091503170231503216321503216940.099000.000160.003691includedK562U2AF2
MXEPRPF3ENSG00000117360.8chr1+150298208150298339150300778150300925150297352150297545150305154150305238-0.279000.002450.029022includedHepG2SFPQ
MXEPRPF3ENSG00000117360.8chr1+150310635150310802150312873150312953150307405150307712150315784150315928-0.200000.003090.075672includedHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PRPF3 is not avaliable on ENCORE database.