PKD1P1

General Information

Gene Name       : PKD1P1
Gene ID             : ENSG00000244257.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PKD1P1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PKD1P1ENSG00000244257.50.000.040.02ENCSR000AEF
HepG2PKD1P1ENSG00000244257.50.740.000.37ENCSR985KAT
K562PKD1P1ENSG00000244257.50.090.000.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PKD1P1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PKD1P1 RNA is bound by 5 proteins.  







eCLIP assay for PKD1P1 is not avaliable on ENCORE database.





5 proteins are bound to PKD1P1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161641796616418048+intron-Distal3.562723.23948HepG2HNRNPK
chr161642043416420538+intron-Distal4.859445.50068HepG2DDX59
chr161642048116420545+intron-Distal4.617606.32277HepG2CSTF2T
chr161641882816418891+intron-Proximal3.835783.01266HepG2SF3B4
chr161642250716422544+intron-Proximal3.356563.64782HepG2EIF3D
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PKD1P1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PKD1P1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of PKD1P1.  








The Knockdown/knockout RNA-Seq assay for PKD1P1 is not available on ENCORE database.





95 RBPs can affect the gene expression of PKD1P1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PKD1P1ENSG00000244257.411.49820100.68470-3.130409.585707.74910HepG2AATF
PKD1P1ENSG00000244257.428.324605.615202.334503.203302.13390HepG2ADAR
PKD1P1ENSG00000244257.443.6929090.92870-1.057303.033502.22540HepG2CIRBP
PKD1P1ENSG00000244257.4331.60960261.773100.341101.866801.30600HepG2CKAP4
PKD1P1ENSG00000244257.416.88950103.17890-2.611008.787006.04960HepG2CSTF2T
PKD1P1ENSG00000244257.427.532805.765302.255602.776301.61390HepG2DDX1
PKD1P1ENSG00000244257.432.94580108.67450-1.721806.453305.06270HepG2DDX24
PKD1P1ENSG00000244257.4343.9912095.200401.853202.805602.18360HepG2DDX6
PKD1P1ENSG00000244257.476.921105.606903.7780012.3835011.10790HepG2DNAJC2
PKD1P1ENSG00000244257.425.07050102.24720-2.028003.422402.18100HepG2AGO1
PKD1P1ENSG00000244257.4207.7874091.495201.183205.573604.74910HepG2EIF2S1
PKD1P1ENSG00000244257.427.0580097.06940-1.843003.032402.09000HepG2EIF3D
PKD1P1ENSG00000244257.4203.2517098.458101.045604.467503.60460HepG2EIF4B
PKD1P1ENSG00000244257.4760.79750382.805600.990806.146705.31090HepG2ETF1
PKD1P1ENSG00000244257.4176.30440255.86010-0.537302.647001.83010HepG2EWSR1
PKD1P1ENSG00000244257.433.59120105.75200-1.654504.344702.95850HepG2FASTKD2
PKD1P1ENSG00000244257.4386.23510249.993600.627503.064302.04090HepG2HDGF
PKD1P1ENSG00000244257.454.303806.348903.096404.883103.98140HepG2HNRNPC
PKD1P1ENSG00000244257.4253.6947095.873801.403809.949308.69400HepG2HNRNPK
PKD1P1ENSG00000244257.480.0976038.498101.056903.840003.05420HepG2HNRNPL
PKD1P1ENSG00000244257.476.462506.306803.599709.244508.18530HepG2HNRNPU
PKD1P1ENSG00000244257.4136.65270240.52770-0.815702.872601.61420HepG2HSPD1
PKD1P1ENSG00000244257.431.111406.441902.271804.045903.17650HepG2ILF2
PKD1P1ENSG00000244257.4182.5838056.474601.692802.571901.43360HepG2KHDRBS1
PKD1P1ENSG00000244257.4381.34910102.077201.9014020.8757019.16180HepG2MAGOH
PKD1P1ENSG00000244257.4280.67740102.642901.4512010.204109.05290HepG2MATR3
PKD1P1ENSG00000244257.4280.10410105.056301.414708.225007.16070HepG2NCBP2
PKD1P1ENSG00000244257.497.7314041.920701.221105.298804.25020HepG2NOL12
PKD1P1ENSG00000244257.4171.7759043.529501.980409.560107.49720HepG2NONO
PKD1P1ENSG00000244257.4213.1514053.943101.982302.229901.44810HepG2PABPC1
PKD1P1ENSG00000244257.433.240706.240802.413104.349503.31750HepG2PARN
PKD1P1ENSG00000244257.4248.0632083.717601.5670015.0886013.85390HepG2PCBP1
PKD1P1ENSG00000244257.4129.005205.624904.519407.004905.87170HepG2PPIL4
PKD1P1ENSG00000244257.413.7255055.48530-2.015205.100903.48430HepG2PRPF6
PKD1P1ENSG00000244257.470.0108036.599900.935602.084401.37890HepG2PRPF8
PKD1P1ENSG00000244257.4219.4009040.026402.4544024.7584023.21660HepG2PUF60
PKD1P1ENSG00000244257.4183.5768042.500902.110701.967501.45020HepG2PUM1
PKD1P1ENSG00000244257.4170.4448092.259300.885404.016703.28400HepG2QKI
PKD1P1ENSG00000244257.4189.6161083.730501.179201.991301.41230HepG2RBM25
PKD1P1ENSG00000244257.4169.6473048.861601.795705.018103.66400HepG2RBM27
PKD1P1ENSG00000244257.4206.4481094.803301.122703.990103.36220HepG2NELFE
PKD1P1ENSG00000244257.4154.3388088.294900.805603.355202.68430HepG2RECQL
PKD1P1ENSG00000244257.4105.3986057.334700.878302.087301.48440HepG2RPLP0
PKD1P1ENSG00000244257.4116.2101045.047401.367103.139702.28610HepG2RPS2
PKD1P1ENSG00000244257.4197.4354059.481501.730802.736001.94070HepG2RPS3A
PKD1P1ENSG00000244257.4114.4200046.000801.314502.330001.34950HepG2RPS5
PKD1P1ENSG00000244257.4114.016805.615604.3436014.3524013.05580HepG2SAFB2
PKD1P1ENSG00000244257.4272.9001056.002802.284705.518503.66790HepG2SART3
PKD1P1ENSG00000244257.480.4491019.777802.024104.099902.37090HepG2SF1
PKD1P1ENSG00000244257.4182.4844086.358401.079302.082801.46430HepG2SF3B1
PKD1P1ENSG00000244257.4322.2172088.690101.8611011.3867010.31410HepG2SF3B4
PKD1P1ENSG00000244257.4101.3238019.261402.395103.816702.05510HepG2SFPQ
PKD1P1ENSG00000244257.4232.7771038.401802.5996032.4392030.57060HepG2SLBP
PKD1P1ENSG00000244257.453.979406.547303.043308.957007.90440HepG2SMN1
PKD1P1ENSG00000244257.4105.9026052.033901.025103.557202.45560HepG2SMNDC1
PKD1P1ENSG00000244257.4131.9257049.660301.409506.497504.01650HepG2SND1
PKD1P1ENSG00000244257.4123.4229017.749402.797709.025806.42740HepG2SNRNP200
PKD1P1ENSG00000244257.456.5385092.57260-0.711301.933901.51840HepG2SRSF1
PKD1P1ENSG00000244257.4192.1831039.533502.2812022.5914021.04260HepG2SRSF5
PKD1P1ENSG00000244257.4127.4260052.275301.285404.906404.02090HepG2SRSF7
PKD1P1ENSG00000244257.4204.39740100.130501.029405.131803.50340HepG2STAU1
PKD1P1ENSG00000244257.4127.4263044.949201.503208.878207.87080HepG2SUCLG1
PKD1P1ENSG00000244257.4160.69210101.228800.666602.636901.71690HepG2SUPT6H
PKD1P1ENSG00000244257.424.8362083.20580-1.744206.791405.98140HepG2TAF15
PKD1P1ENSG00000244257.482.85700235.51920-1.507103.710202.48320HepG2TBRG4
PKD1P1ENSG00000244257.4175.981206.122604.8450040.3204038.82110HepG2TIAL1
PKD1P1ENSG00000244257.4152.696706.183404.6260037.3679035.59520HepG2TRIM56
PKD1P1ENSG00000244257.4186.1331039.122202.250203.485302.49320HepG2TUFM
PKD1P1ENSG00000244257.4278.0592041.422102.7468012.3206010.49960HepG2UBE2L3
PKD1P1ENSG00000244257.481.6559027.893701.549505.678104.58260HepG2UCHL5
PKD1P1ENSG00000244257.4193.7468053.296601.862002.902401.77370HepG2XPO5
PKD1P1ENSG00000244257.498.3396050.910900.949702.954401.60990HepG2ZRANB2
PKD1P1ENSG00000244257.4238.24260158.409000.588702.607601.42960K562ABCF1
PKD1P1ENSG00000244257.4488.17090336.057900.538601.970301.47600K562AGGF1
PKD1P1ENSG00000244257.4150.24880290.48560-0.951105.236704.47420K562AQR
PKD1P1ENSG00000244257.4182.6506051.586801.823906.375704.89310K562BCLAF1
PKD1P1ENSG00000244257.4254.89670401.61650-0.655904.990703.36540K562CCDC124
PKD1P1ENSG00000244257.4438.22950276.106500.666405.655604.77440K562DDX47
PKD1P1ENSG00000244257.464.4550019.774101.704602.563901.79730K562EIF3G
PKD1P1ENSG00000244257.4240.42540112.177201.099706.446703.64230K562EIF3H
PKD1P1ENSG00000244257.418.3914090.77060-2.303207.460905.46360K562FKBP4
PKD1P1ENSG00000244257.481.34120264.68530-1.702204.021803.31250K562FXR1
PKD1P1ENSG00000244257.4377.7893098.197101.943706.579004.41380K562HNRNPA2B1
PKD1P1ENSG00000244257.443.4939093.68480-1.107003.188402.18430K562HNRNPM
PKD1P1ENSG00000244257.4460.66820105.619302.1248012.270708.35760K562HNRNPUL1
PKD1P1ENSG00000244257.4267.8439065.084602.040904.255802.86780K562IGF2BP2
PKD1P1ENSG00000244257.4191.3292068.088901.490502.263201.49930K562MAGOH
PKD1P1ENSG00000244257.4323.0900085.881901.9114010.226307.90170K562PABPN1
PKD1P1ENSG00000244257.4401.00670102.091501.9737012.871509.38860K562PPP1R8
PKD1P1ENSG00000244257.491.5348050.126200.868702.145701.48200K562PRPF8
PKD1P1ENSG00000244257.4242.62280121.434900.998404.088102.13850K562RBM17
PKD1P1ENSG00000244257.4257.18060117.712101.127404.114201.50300K562DROSHA
PKD1P1ENSG00000244257.4249.0238078.533901.664802.934501.68220K562SF1
PKD1P1ENSG00000244257.458.4737017.260701.760202.719601.87190K562SF3B4
PKD1P1ENSG00000244257.4234.5916090.202801.378805.667303.70390K562SNRNP200
PKD1P1ENSG00000244257.4103.8640050.059301.052903.454001.59280K562SRP68
PKD1P1ENSG00000244257.4168.5210064.909601.376302.014601.40000K562SRSF1
PKD1P1ENSG00000244257.4195.2592044.500002.133405.315703.76970K562SRSF4
PKD1P1ENSG00000244257.4199.7820061.389001.702302.347401.39350K562SRSF5
PKD1P1ENSG00000244257.4238.86200107.888701.146504.113902.22870K562SUPT6H
PKD1P1ENSG00000244257.4131.5294048.526401.438406.196104.63260K562SUPV3L1
PKD1P1ENSG00000244257.4217.2970065.617101.727403.977803.12200K562TARDBP
PKD1P1ENSG00000244257.4165.8308063.315001.389002.091001.38660K562TIA1
PKD1P1ENSG00000244257.4198.60490451.17680-1.183802.817701.40270K562UBE2L3
PKD1P1ENSG00000244257.4130.3718051.362501.343703.538502.37790K562UCHL5
PKD1P1ENSG00000244257.4252.7657091.798301.461206.611703.89080K562XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PKD1P1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PKD1P1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PKD1P1 is not avaliable on ENCORE database.