PITHD1

General Information

Gene Name       : PITHD1
Gene ID             : ENSG00000057757.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PITHD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PITHD1ENSG00000057757.944.1243.8043.96ENCSR000AEF
HepG2PITHD1ENSG00000057757.927.6536.4232.03ENCSR985KAT
K562PITHD1ENSG00000057757.996.2193.1594.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PITHD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PITHD1 RNA is bound by 16 proteins.  







eCLIP assay for PITHD1 is not avaliable on ENCORE database.





16 proteins are bound to PITHD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12411385624113895+3'-UTR,CDS3.894188.05355K562PABPC4
chr12411443224114477+3'-UTR3.5530519.42324K562YBX3
chr12411423324114276+3'-UTR4.054508.28779HepG2SUB1
chr12411439524114467+3'-UTR5.4784612.55096K562LIN28B
chr12411452924114553+3'-UTR5.9808917.53859K562LIN28B
chr12411424324114299+3'-UTR3.065986.81291K562TIA1
chr12411424124114306+3'-UTR3.1326410.00757K562PABPC4
chr12411452924114612+3'-UTR3.3727811.43396K562UPF1
chr12411455324114605+3'-UTR4.4481616.04045K562LIN28B
chr12411454424114659+3'-UTR4.303997.11997HepG2SUB1
chr12411423224114314+3'-UTR3.3421017.44144K562UPF1
chr12411445124114529+3'-UTR3.878669.37566K562UPF1
chr12410636824106429+5'-UTR,CDS3.699509.27734K562LIN28B
chr12411216924112242+5'-UTR,CDS3.291596.94390K562SF3B4
chr12410629924106352+5'-UTR,intron-Proximal6.6420417.70754K562SF3B4
chr12411214924112221+5'-UTR,CDS,intron-Proximal3.433974.95081K562U2AF1
chr12410631024106384+5'-UTR,CDS,intron-Proximal3.782716.88667K562BUD13
chr12410490924104998+5'-UTR4.253383.98935HepG2NCBP2
chr12410492724104989+5'-UTR3.161083.36034K562SRSF1
chr12411215124112209+5'-UTR,CDS,intron-Proximal4.5816814.01882K562U2AF2
chr12410589524105930+5'-UTR,CDS,intron-Proximal3.753898.67867K562AQR
chr12410490624105033+5'-UTR,CDS4.0032513.57302K562DDX3X
chr12410592924106024+5'-UTR,CDS,intron-Proximal3.8080914.18840K562EFTUD2
chr12410597024105980+5'-UTR,CDS,intron-Proximal5.2063611.82040K562AQR
chr12410599624106010+5'-UTR,intron-Proximal6.2955312.87452K562AQR
chr12411211224112169+5'-UTR,CDS,intron-Proximal3.876557.62845K562SF3B4
chr12410598024105996+5'-UTR,intron-Proximal5.2642712.21485K562AQR
chr12410518124105277+CDS,intron-Proximal4.492047.79098HepG2PRPF8
chr12410640624106453+CDS,intron-Proximal3.113004.38519K562BUD13
chr12411220924112249+CDS3.107493.21655K562U2AF2
chr12411219324112236+CDS3.371483.07411K562LIN28B
chr12411278324112822+CDS,intron-Proximal3.296323.32861HepG2U2AF2
chr12410520224105207+CDS,intron-Proximal5.4365923.89805K562AQR
chr12411232224112382+intron-Distal,intron-Proximal3.085914.07440K562PRPF8
chr12410661724106667+intron-Distal4.422483.49003K562PRPF8
chr12410520324105274+intron-Proximal4.1409111.53679K562BUD13
chr12410520724105271+intron-Proximal6.4491534.23192K562AQR
chr12410522424105270+intron-Proximal4.690868.13161K562EFTUD2
chr12410521124105280+intron-Proximal5.530829.87486K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PITHD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PITHD1 is not available on ENCORE database.

  • 80 RBPs can affect the levels of PITHD1.  








The Knockdown/knockout RNA-Seq assay for PITHD1 is not available on ENCORE database.





80 RBPs can affect the gene expression of PITHD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PITHD1ENSG00000057757.5228.75160356.87020-0.641603.576502.68590HepG2ASCC1
PITHD1ENSG00000057757.5721.16450586.307400.298602.056101.44740HepG2AUH
PITHD1ENSG00000057757.5556.76250358.128500.636505.059404.28070HepG2BOP1
PITHD1ENSG00000057757.5268.58170339.05910-0.336201.875801.31380HepG2CKAP4
PITHD1ENSG00000057757.5216.50160328.78110-0.602703.091802.37010HepG2CPSF6
PITHD1ENSG00000057757.5239.17230351.75570-0.556503.683902.50950HepG2YBX3
PITHD1ENSG00000057757.5359.39430636.66620-0.8250012.6003011.20650HepG2DAZAP1
PITHD1ENSG00000057757.5197.82330352.22600-0.832306.918105.19100HepG2DDX1
PITHD1ENSG00000057757.5376.71760279.216800.432002.282001.46180HepG2DDX24
PITHD1ENSG00000057757.5151.23260293.63990-0.957306.023604.06560HepG2DDX28
PITHD1ENSG00000057757.5259.48470345.36870-0.412502.347601.69330HepG2DNAJC21
PITHD1ENSG00000057757.5250.65950341.19710-0.444901.906101.40310HepG2EIF2S1
PITHD1ENSG00000057757.5563.26120377.090700.578803.641802.91070HepG2EIF4A3
PITHD1ENSG00000057757.5451.63600628.17010-0.476004.280603.28200HepG2EIF4G1
PITHD1ENSG00000057757.5319.97490601.73600-0.911209.185007.73830HepG2EIF4G2
PITHD1ENSG00000057757.5440.68130331.395600.411102.397301.62120HepG2EWSR1
PITHD1ENSG00000057757.5493.85140352.598300.486003.136902.04940HepG2GNB2L1
PITHD1ENSG00000057757.5181.98850372.69810-1.034207.447706.42710HepG2GPKOW
PITHD1ENSG00000057757.5465.64570585.14800-0.329602.137001.30470HepG2HNRNPA2B1
PITHD1ENSG00000057757.5352.27640538.23510-0.611505.897204.90170HepG2HNRNPF
PITHD1ENSG00000057757.5436.53040579.93320-0.409803.584302.82370HepG2HNRNPL
PITHD1ENSG00000057757.5235.25320355.67270-0.596302.553101.94420HepG2HNRNPLL
PITHD1ENSG00000057757.5250.62540393.55700-0.651006.305105.24230HepG2ILF2
PITHD1ENSG00000057757.5477.37140304.403400.649003.491702.08610HepG2KRR1
PITHD1ENSG00000057757.5880.65810380.517001.2105016.3165014.78920HepG2MAGOH
PITHD1ENSG00000057757.5594.59790382.660400.635704.183803.42350HepG2MATR3
PITHD1ENSG00000057757.5216.20190315.37260-0.544702.438001.73530HepG2NSUN2
PITHD1ENSG00000057757.5205.23910299.00310-0.542902.484401.71720HepG2PRPF8
PITHD1ENSG00000057757.5457.07100343.474200.412102.612002.07800HepG2PTBP1
PITHD1ENSG00000057757.5347.71430602.67000-0.793504.554603.81150HepG2PUF60
PITHD1ENSG00000057757.5459.66590639.30200-0.475903.700902.93070HepG2PUM2
PITHD1ENSG00000057757.5428.73590345.451400.311501.922301.38930HepG2PUS1
PITHD1ENSG00000057757.5602.51360296.402801.023306.391805.34540HepG2RAVER1
PITHD1ENSG00000057757.5316.93050447.30760-0.497102.332701.59570HepG2RPS3A
PITHD1ENSG00000057757.5510.82790361.434900.499002.453401.81910HepG2SF3A3
PITHD1ENSG00000057757.5200.68260352.04520-0.810805.374104.41390HepG2SF3B1
PITHD1ENSG00000057757.5363.25420577.91280-0.669907.861306.77000HepG2SLBP
PITHD1ENSG00000057757.5242.28020462.95620-0.934202.722401.42490HepG2SNRNP200
PITHD1ENSG00000057757.5763.93730635.492300.265501.885801.44820HepG2SRFBP1
PITHD1ENSG00000057757.5730.39300373.288800.9683015.3510014.42950HepG2SRSF1
PITHD1ENSG00000057757.5409.77460303.673300.432202.896302.33450HepG2SRSF9
PITHD1ENSG00000057757.5284.94200374.32730-0.393602.143001.69210HepG2TIAL1
PITHD1ENSG00000057757.5222.62200377.72980-0.762806.099705.32000HepG2TRIM56
PITHD1ENSG00000057757.5179.57540538.24700-1.583705.964404.46580HepG2U2AF2
PITHD1ENSG00000057757.5144.60360227.95220-0.656603.184302.37160HepG2UCHL5
PITHD1ENSG00000057757.5603.74210353.328500.772804.536503.23320HepG2UPF2
PITHD1ENSG00000057757.5646.52410309.466701.0628017.8404016.51630HepG2UTP3
PITHD1ENSG00000057757.5199.97120280.20480-0.486702.781102.10720HepG2ZC3H8
PITHD1ENSG00000057757.5442.09520352.530100.326502.201201.69760HepG2ZNF622
PITHD1ENSG00000057757.52039.623401655.692800.300802.429501.32990K562AARS
PITHD1ENSG00000057757.53129.349802286.049300.4529010.110909.11490K562AGGF1
PITHD1ENSG00000057757.52811.641002378.740200.241101.916901.36880K562AKAP8L
PITHD1ENSG00000057757.56617.377503249.203901.0261020.3999018.97810K562AQR
PITHD1ENSG00000057757.51077.472801494.43750-0.472007.576004.32970K562ASCC1
PITHD1ENSG00000057757.5581.64680890.14640-0.613905.797704.12590K562CCAR1
PITHD1ENSG00000057757.52157.056503449.93710-0.677502.532701.52460K562CNOT7
PITHD1ENSG00000057757.52153.723802668.84570-0.309403.919702.59450K562CPEB4
PITHD1ENSG00000057757.55574.157604565.522900.287903.606302.49170K562CELF1
PITHD1ENSG00000057757.5528.74730937.97370-0.827005.651003.09630K562DDX1
PITHD1ENSG00000057757.5986.944701839.42120-0.8982012.184308.89620K562DDX28
PITHD1ENSG00000057757.51175.210501549.65090-0.399004.052702.76180K562DDX3X
PITHD1ENSG00000057757.54809.400802761.596600.800309.664508.53490K562DDX47
PITHD1ENSG00000057757.52323.923402846.62160-0.292703.845703.01930K562EIF2S2
PITHD1ENSG00000057757.52242.615201642.148000.449506.632605.41430K562EIF3G
PITHD1ENSG00000057757.51249.516401664.79900-0.414004.450602.80060K562EXOSC5
PITHD1ENSG00000057757.52447.440801683.728100.5395010.452109.36140K562FXR1
PITHD1ENSG00000057757.54453.789303793.476600.231402.044601.38880K562GRSF1
PITHD1ENSG00000057757.51147.135001617.81620-0.496005.535903.84740K562HNRNPF
PITHD1ENSG00000057757.51966.127202495.73290-0.344103.516502.30740K562HNRNPL
PITHD1ENSG00000057757.52745.496201882.491500.544305.334503.99140K562HNRNPM
PITHD1ENSG00000057757.53116.102302524.429800.303703.140002.25780K562KIF1C
PITHD1ENSG00000057757.5997.428301348.16920-0.434702.655601.74380K562KRR1
PITHD1ENSG00000057757.52664.523101982.224000.426702.902101.99520K562NAA15
PITHD1ENSG00000057757.51940.975102342.40180-0.271204.994504.03290K562NSUN2
PITHD1ENSG00000057757.52468.568801676.521200.558106.850105.66890K562PRPF8
PITHD1ENSG00000057757.51238.840101624.34530-0.390903.268702.27310K562PSIP1
PITHD1ENSG00000057757.53036.007801943.464100.6434011.7971010.48170K562PTBP1
PITHD1ENSG00000057757.54746.177804051.288800.228302.048901.34620K562PUF60
PITHD1ENSG00000057757.55353.247004309.157700.312903.918002.62780K562PUM1
PITHD1ENSG00000057757.53709.656502359.041200.653009.351208.40240K562PUS1
PITHD1ENSG00000057757.52685.152402298.543800.224202.280601.73320K562RBM15
PITHD1ENSG00000057757.52481.298201707.958900.538705.380404.23730K562RPS19
PITHD1ENSG00000057757.51886.978602311.26820-0.292603.699202.76400K562SF3A3
PITHD1ENSG00000057757.51077.305901501.59360-0.479103.731902.59330K562SF3B1
PITHD1ENSG00000057757.51114.500601644.60540-0.561308.466506.93180K562SF3B4
PITHD1ENSG00000057757.51037.589301404.89950-0.437203.970302.67160K562SRFBP1
PITHD1ENSG00000057757.51241.512601673.81350-0.431003.199901.42390K562SRP68
PITHD1ENSG00000057757.53927.523601905.255501.0435030.3048027.97550K562SRSF1
PITHD1ENSG00000057757.51020.310101285.88320-0.333802.712201.67710K562SRSF4
PITHD1ENSG00000057757.52185.849202746.78960-0.329602.594001.38840K562STAU1
PITHD1ENSG00000057757.5932.323101623.65210-0.800307.315605.60840K562SUPV3L1
PITHD1ENSG00000057757.5947.276501562.34870-0.721908.386606.68500K562TIAL1
PITHD1ENSG00000057757.5882.068101659.79180-0.9120015.3747012.74140K562TRIM56
PITHD1ENSG00000057757.52131.119802677.73530-0.329402.819801.41970K562TRIP6
PITHD1ENSG00000057757.5914.786801583.44560-0.7916015.0726013.17580K562U2AF2
PITHD1ENSG00000057757.5779.833701718.22710-1.1397012.119609.93120K562UCHL5
PITHD1ENSG00000057757.52141.713802483.69380-0.213702.651901.94830K562UPF1
PITHD1ENSG00000057757.51755.664202125.22570-0.275602.471401.64230K562WDR3
PITHD1ENSG00000057757.53067.668702209.937600.4730012.2631010.63490K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PITHD1 is not available on ENCORE database.





13 RBPs can affect the splicing of PITHD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.112000.000010.00037excludedK562SF3B4
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.475000.000000.00000excludedHepG2U2AF1
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.424000.000000.00000excludedHepG2U2AF2
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.123000.002190.02715excludedHepG2U2AF2
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.210000.000000.00000excludedK562AQR
SEPITHD1ENSG00000057757.5chr1+241127162411291324112057241122692411376424114722-0.059000.000000.00005excludedK562AQR
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.056000.000000.00000excludedK562PUS1
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.504000.000000.00000excludedK562U2AF1
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.054000.000050.00644excludedK562HNRNPL
SEPITHD1ENSG00000057757.5chr1+2410592724105971241048942410520324106353241064310.212000.000010.00072includedHepG2SRSF1
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.086000.003570.08169excludedHepG2SF3A3
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.469000.000000.00000excludedK562U2AF2
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.109000.000030.00096excludedK562U2AF2
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.067000.000000.00019excludedK562TARDBP
SEPITHD1ENSG00000057757.5chr1+241128042411291324112164241122692411376424114722-0.053000.000000.00000excludedK562RBM15
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.143000.000000.00000excludedK562SF3B1
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.085000.000170.01159excludedK562HNRNPK
SEPITHD1ENSG00000057757.5chr1+241059272410597124104894241052032410635324106431-0.289000.000000.00000excludedK562HNRNPC
A3SSPITHD1ENSG00000057757.5chr1+2410587524105971241059272410597124104894241052030.083000.000000.00000longerK562AQR
MXEPITHD1ENSG00000057757.5chr1+24112164241122692411280424112913241063532410643124113764241147220.292000.000000.000001includedK562U2AF1
MXEPITHD1ENSG00000057757.5chr1+2410592724105971241121642411226924104894241052032411280424112913-0.126000.000080.000962includedK562AQR
MXEPITHD1ENSG00000057757.5chr1+2410592724105971241063212410643124104894241052032411216424112269-0.095000.001100.009932includedK562AQR
MXEPITHD1ENSG00000057757.5chr1+2410592724105971241063532410648324104894241052032411216424112269-0.258000.000000.000002includedK562AQR
MXEPITHD1ENSG00000057757.5chr1+2410592724105971241063532410643124104894241052032411216424112269-0.109000.000060.000782includedK562AQR
MXEPITHD1ENSG00000057757.5chr1+2410592724105971241063072410643124104894241052032411216424112269-0.095000.001080.009772includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PITHD1 is not avaliable on ENCORE database.