OGFOD1

General Information

Gene Name       : OGFOD1
Gene ID             : ENSG00000087263.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: OGFOD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878OGFOD1ENSG00000087263.1646.9241.2344.08ENCSR000AEF
HepG2OGFOD1ENSG00000087263.1654.1779.7666.97ENCSR985KAT
K562OGFOD1ENSG00000087263.1665.0359.7862.41ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for OGFOD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • OGFOD1 RNA is bound by 19 proteins.  







eCLIP assay for OGFOD1 is not avaliable on ENCORE database.





19 proteins are bound to OGFOD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165650451156504682+3'-UTR,CDS3.491347.83567HepG2BCLAF1
chr165651054156510614+3'-UTR5.271607.47072HepG2IGF2BP1
chr165651115756511248+3'-UTR3.368343.48322HepG2UPF1
chr165650873256508801+3'-UTR,CDS,intron-Proximal4.296323.12827HepG2U2AF2
chr165651014956510225+3'-UTR4.994713.81167HepG2SUB1
chr165651124256511349+3'-UTR3.412338.77718K562UPF1
chr165651058856510659+3'-UTR3.864965.05222K562IGF2BP1
chr165651109356511140+3'-UTR3.362454.75109K562UPF1
chr165651071656510781+3'-UTR3.596926.04024K562UPF1
chr165651106356511105+3'-UTR5.5334916.54688K562PABPC4
chr165651124456511305+3'-UTR4.327185.41983K562LIN28B
chr165650461456504697+3'-UTR,CDS4.054703.88780HepG2G3BP1
chr165650440756504502+3'-UTR,CDS4.446573.02060K562LIN28B
chr165651114256511242+3'-UTR4.7063410.92855K562UPF1
chr165651110556511161+3'-UTR4.832015.94584K562PABPC4
chr165651073656510794+3'-UTR3.134203.27901HepG2UPF1
chr165650113856501205+3'-UTR,CDS,intron-Distal4.252674.15726HepG2G3BP1
chr165650876856508828+3'-UTR,CDS4.310054.04372HepG2BCLAF1
chr165651132256511381+3'-UTR3.606333.01531K562YBX3
chr165650461256504704+3'-UTR,CDS,intron-Proximal3.434833.95937K562UCHL5
chr165650391756503998+3'-UTR,CDS,intron-Proximal3.164683.39477K562BUD13
chr165648547656485682+5'-UTR,CDS,intron-Distal,intron-Proximal3.130159.54151K562ZNF622
chr165648717856487295+5'-UTR,CDS,intron-Proximal3.175516.66900HepG2GRWD1
chr165648558556485676+CDS,intron-Distal,intron-Proximal3.139373.69997K562GRWD1
chr165648719656487293+CDS,intron-Proximal3.010434.83973K562ZNF622
chr165648563256485733+CDS,intron-Distal,intron-Proximal3.8891212.75073HepG2PRPF8
chr165648731556487373+CDS,intron-Proximal4.846024.86944K562AQR
chr165650750656507574+intron-Distal4.477614.20763HepG2U2AF2
chr165649015956490210+intron-Distal4.073035.63677K562PTBP1
chr165649010356490163+intron-Distal3.569163.04190HepG2MATR3
chr165649217256492260+intron-Distal3.748378.28561HepG2QKI
chr165649011356490280+intron-Distal5.198619.83650K562MATR3
chr165648732756487529+intron-Distal,intron-Proximal4.464707.64759K562PRPF8
chr165649010956490239+intron-Distal3.7338011.04476HepG2PTBP1
chr165649017356490231+intron-Distal5.620217.15419HepG2MATR3
chr165649026456490315+intron-Distal3.239323.46325HepG2SUGP2
chr165649010956490159+intron-Distal5.107336.57566K562PTBP1
chr165650018556500219+intron-Proximal5.264846.01989HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for OGFOD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for OGFOD1 is not available on ENCORE database.

  • 78 RBPs can affect the levels of OGFOD1.  








The Knockdown/knockout RNA-Seq assay for OGFOD1 is not available on ENCORE database.





78 RBPs can affect the gene expression of OGFOD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
OGFOD1ENSG00000087263.121271.600301002.551900.342902.547101.51610HepG2AATF
OGFOD1ENSG00000087263.121732.370001317.372200.395006.727205.86320HepG2ACO1
OGFOD1ENSG00000087263.121014.522501423.34420-0.488504.119603.16990HepG2ASCC1
OGFOD1ENSG00000087263.121862.558402295.30830-0.301402.459501.89150HepG2BOP1
OGFOD1ENSG00000087263.121968.608801630.200700.272002.402301.68010HepG2CALR
OGFOD1ENSG00000087263.12680.403401352.27690-0.9909014.2817012.68160HepG2CIRBP
OGFOD1ENSG00000087263.12991.036802107.21840-1.0883020.8395019.17340HepG2CPSF6
OGFOD1ENSG00000087263.122217.510801731.562800.356805.102704.27760HepG2CELF1
OGFOD1ENSG00000087263.121451.453501861.93800-0.359306.554505.48370HepG2DAZAP1
OGFOD1ENSG00000087263.121287.438801647.84240-0.356102.459801.86700HepG2DDX3X
OGFOD1ENSG00000087263.12961.533501260.36140-0.390404.915904.06090HepG2DKC1
OGFOD1ENSG00000087263.12946.823601113.44040-0.233902.375901.76240HepG2DNAJC2
OGFOD1ENSG00000087263.121742.596501320.751700.399804.603003.11410HepG2EIF2S2
OGFOD1ENSG00000087263.12587.30990782.23910-0.413502.292701.46260HepG2EIF3D
OGFOD1ENSG00000087263.121071.730101464.19830-0.450202.601701.93280HepG2EIF4B
OGFOD1ENSG00000087263.121323.956701759.59250-0.410403.772202.83030HepG2EIF4G2
OGFOD1ENSG00000087263.121870.540502560.11010-0.452808.586107.62760HepG2ETF1
OGFOD1ENSG00000087263.121798.760101287.284600.482603.609702.65560HepG2EWSR1
OGFOD1ENSG00000087263.12893.105702110.82970-1.240907.797306.09950HepG2FTO
OGFOD1ENSG00000087263.12596.86460890.63520-0.577405.952104.81980HepG2FUBP3
OGFOD1ENSG00000087263.121008.564901407.51920-0.480903.734502.96490HepG2G3BP1
OGFOD1ENSG00000087263.121160.957701494.29170-0.364102.590101.73080HepG2G3BP2
OGFOD1ENSG00000087263.12797.116101134.15470-0.508805.104104.26300HepG2HNRNPA1
OGFOD1ENSG00000087263.12795.516201261.52660-0.665207.979506.84690HepG2HNRNPC
OGFOD1ENSG00000087263.121461.550002009.90530-0.459608.391807.23140HepG2HNRNPF
OGFOD1ENSG00000087263.121099.627301696.10820-0.6252016.3489014.83080HepG2HNRNPL
OGFOD1ENSG00000087263.121465.452602279.57740-0.637407.757206.76360HepG2HNRNPLL
OGFOD1ENSG00000087263.121023.408701253.18700-0.292203.212802.56310HepG2HNRNPU
OGFOD1ENSG00000087263.121440.514101979.18320-0.458306.062605.03190HepG2IGF2BP1
OGFOD1ENSG00000087263.12765.371101280.09090-0.7420019.0352017.30740HepG2ILF2
OGFOD1ENSG00000087263.12999.245101204.22690-0.269203.129202.04620HepG2KIF1C
OGFOD1ENSG00000087263.122171.577601526.343600.508604.271703.50420HepG2MATR3
OGFOD1ENSG00000087263.121629.470302324.87110-0.512703.384202.30470HepG2MTPAP
OGFOD1ENSG00000087263.121406.070701846.28950-0.393005.014703.99190HepG2NOL12
OGFOD1ENSG00000087263.121524.856402021.28080-0.406603.712302.84840HepG2NSUN2
OGFOD1ENSG00000087263.12861.054801117.74450-0.376404.049503.17500HepG2PPIL4
OGFOD1ENSG00000087263.121204.961401640.21870-0.444907.279306.09550HepG2PRPF4
OGFOD1ENSG00000087263.121308.439501762.42180-0.429704.623803.87620HepG2PUF60
OGFOD1ENSG00000087263.121432.704101869.51180-0.383904.549903.70030HepG2PUM2
OGFOD1ENSG00000087263.121100.184401341.82520-0.286503.394202.72970HepG2PUS1
OGFOD1ENSG00000087263.122705.513602139.761100.338404.575803.95320HepG2RBM22
OGFOD1ENSG00000087263.12603.190901127.58120-0.9025010.733708.70410HepG2RCC2
OGFOD1ENSG00000087263.121587.954002165.15690-0.447305.041604.15660HepG2RPLP0
OGFOD1ENSG00000087263.12800.174701116.02480-0.480007.407806.42690HepG2SAFB2
OGFOD1ENSG00000087263.121162.36130763.937000.605406.244704.84580HepG2SERBP1
OGFOD1ENSG00000087263.122285.089301568.301800.542903.969903.15610HepG2SF3A3
OGFOD1ENSG00000087263.121299.162601689.83230-0.379306.624405.61270HepG2SLBP
OGFOD1ENSG00000087263.122860.210102416.751100.243003.404102.86610HepG2SRFBP1
OGFOD1ENSG00000087263.122614.094001543.589600.7599024.2012023.10440HepG2SRSF1
OGFOD1ENSG00000087263.121440.395401974.66480-0.455108.329007.23460HepG2SRSF7
OGFOD1ENSG00000087263.121502.011902098.25910-0.4823010.143509.28040HepG2SSB
OGFOD1ENSG00000087263.122346.668101979.003600.245703.366702.69370HepG2SUCLG1
OGFOD1ENSG00000087263.121109.556801471.12780-0.406902.568701.91430HepG2SUPV3L1
OGFOD1ENSG00000087263.121851.341102221.88030-0.263201.935401.31430HepG2TARDBP
OGFOD1ENSG00000087263.121985.981401503.849100.401103.613902.90000HepG2U2AF1
OGFOD1ENSG00000087263.121081.062201390.84580-0.363505.077004.17540HepG2UPF1
OGFOD1ENSG00000087263.12980.860601448.16310-0.562105.012104.04510HepG2XRN2
OGFOD1ENSG00000087263.121265.654801618.72260-0.355005.730404.81780HepG2ZC3H8
OGFOD1ENSG00000087263.122094.483801529.661400.4533010.860309.95380HepG2ZNF622
OGFOD1ENSG00000087263.121730.532501329.822400.379903.556002.19920K562AARS
OGFOD1ENSG00000087263.121459.216502287.11790-0.6483012.8484011.72290K562AGGF1
OGFOD1ENSG00000087263.122014.318802512.99870-0.319103.006401.97020K562AKAP8
OGFOD1ENSG00000087263.121962.790202379.80110-0.277902.367401.76180K562AKAP8L
OGFOD1ENSG00000087263.122125.541302970.32900-0.482806.038205.22860K562AQR
OGFOD1ENSG00000087263.121465.598801734.98180-0.243402.833801.86230K562BCLAF1
OGFOD1ENSG00000087263.121759.952602465.84520-0.486503.432202.46130K562BOP1
OGFOD1ENSG00000087263.121397.899702035.91820-0.542406.498504.58840K562CIRBP
OGFOD1ENSG00000087263.121844.721902621.96740-0.507206.849505.60740K562CPSF6
OGFOD1ENSG00000087263.121053.779001349.44880-0.356803.340502.18170K562DDX3X
OGFOD1ENSG00000087263.122026.129002415.01060-0.253302.874102.14410K562EIF2S2
OGFOD1ENSG00000087263.121079.128401587.22010-0.556604.395403.05450K562EIF3D
OGFOD1ENSG00000087263.12949.252001269.54540-0.419405.121803.47920K562EIF4B
OGFOD1ENSG00000087263.122711.606903445.33820-0.345505.107403.85060K562EIF4G2
OGFOD1ENSG00000087263.12818.194801263.04190-0.626406.031304.25120K562FKBP4
OGFOD1ENSG00000087263.121340.047502261.02740-0.7547010.062208.21460K562FTO
OGFOD1ENSG00000087263.121911.285801466.114600.382405.230404.43630K562FXR1
OGFOD1ENSG00000087263.121860.027402503.38680-0.428604.823003.77910K562GPKOW
OGFOD1ENSG00000087263.122442.382603218.28600-0.398004.744003.75480K562GRSF1
OGFOD1ENSG00000087263.12993.858501455.45090-0.550404.504003.76090K562HNRNPC
OGFOD1ENSG00000087263.122534.046701897.380500.417303.731302.27470K562HNRNPK
OGFOD1ENSG00000087263.122028.486802525.73450-0.316303.223502.32680K562KIF1C
OGFOD1ENSG00000087263.121925.669801408.947000.450604.888202.96460K562LARP7
OGFOD1ENSG00000087263.121708.259102110.93430-0.305404.472303.46470K562MTPAP
OGFOD1ENSG00000087263.121886.995002345.48500-0.313806.437705.36310K562NSUN2
OGFOD1ENSG00000087263.121280.874502093.52690-0.708803.612002.43830K562PABPN1
OGFOD1ENSG00000087263.122270.439101781.453100.349803.459602.55820K562POLR2G
OGFOD1ENSG00000087263.123168.863603917.68230-0.306004.275303.07490K562PUM2
OGFOD1ENSG00000087263.121394.086902360.45840-0.7597011.4755010.41770K562PUS1
OGFOD1ENSG00000087263.121974.169502299.62210-0.220202.001601.48220K562RBM15
OGFOD1ENSG00000087263.12815.264901190.35930-0.546106.307004.81120K562RCC2
OGFOD1ENSG00000087263.121981.335601587.467200.319602.875501.77190K562SAFB
OGFOD1ENSG00000087263.122455.619301901.359800.369004.176003.31470K562SRSF1
OGFOD1ENSG00000087263.121458.386601795.53080-0.300002.268401.33500K562SRSF5
OGFOD1ENSG00000087263.122451.344901786.909700.456006.487405.22190K562SYNCRIP
OGFOD1ENSG00000087263.121441.251901924.43980-0.417103.729702.90310K562TARDBP
OGFOD1ENSG00000087263.121725.890702128.02240-0.302202.821801.93630K562WDR3
OGFOD1ENSG00000087263.122391.829403346.22710-0.484406.223404.84400K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for OGFOD1 is not available on ENCORE database.





13 RBPs can affect the splicing of OGFOD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEOGFOD1ENSG00000087263.12chr16+565007875650087956500063565001805650107656501110-0.057000.000000.00016excludedHepG2U2AF1
SEOGFOD1ENSG00000087263.12chr16+565039145650399456501816565019305650439856504703-0.064000.000000.00004excludedK562AQR
SEOGFOD1ENSG00000087263.12chr16+564964225649654656492459564925065650006356500115-0.058000.007460.06441excludedK562AQR
A3SSOGFOD1ENSG00000087263.12chr16+5649242456492506564924595649250656487139564873200.102000.000000.00000longerK562AQR
A3SSOGFOD1ENSG00000087263.12chr16+5650938256509477565094185650947756508739565088620.144000.000000.00000longerK562AQR
A3SSOGFOD1ENSG00000087263.12chr16+5649642256496546564964455649654656492459564925060.058000.000650.00474longerK562AQR
A5SSOGFOD1ENSG00000087263.12chr16+5648543256485672564854325648547956487174564873200.174000.000550.09977longerK562HNRNPU
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.075000.000020.006601includedK562LARP4
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.140000.001540.044841includedK562XRN2
MXEOGFOD1ENSG00000087263.12chr16+5650107656501205565018165650193056500787565008795650391456503994-0.058000.000200.053212includedK562UTP3
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.101000.000010.009251includedK562SDAD1
MXEOGFOD1ENSG00000087263.12chr16+5650078756500879565010765650120556500063565001805650181656501930-0.092000.005720.095212includedK562SBDS
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.102000.000010.001201includedK562SAFB
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.097000.000020.006271includedK562ZNF800
MXEOGFOD1ENSG00000087263.12chr16+56500787565008795650107656501205565000635650018056501816565019300.176000.000020.006931includedK562ZNF800
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.098000.000010.000601includedK562DDX55
MXEOGFOD1ENSG00000087263.12chr16+5649245956492506564964455649654656487174564873205650006356500180-0.151000.001710.072252includedK562TIA1
MXEOGFOD1ENSG00000087263.12chr16+56501076565012055650181656501930565007875650087956503914565039940.179000.001500.042291includedHepG2TIAL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for OGFOD1 is not avaliable on ENCORE database.