NTAN1

General Information

Gene Name       : NTAN1
Gene ID             : ENSG00000157045.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NTAN1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NTAN1ENSG00000157045.844.1235.0539.58ENCSR000AEF
HepG2NTAN1ENSG00000157045.858.0363.7160.87ENCSR985KAT
K562NTAN1ENSG00000157045.814.2219.3716.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NTAN1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NTAN1 RNA is bound by 7 proteins.  







eCLIP assay for NTAN1 is not avaliable on ENCORE database.





7 proteins are bound to NTAN1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161514979115149911-5'-UTR,CDS,intron-Distal,intron-Proximal5.9211611.05478HepG2DDX3X
chr161514969715149785-5'-UTR,CDS,intron-Distal,intron-Proximal3.326585.39110HepG2PRPF8
chr161514975215149889-5'-UTR,CDS,intron-Distal,intron-Proximal3.214775.59842HepG2GRSF1
chr161514173915141769-CDS,intron-Distal,intron-Proximal4.247893.35169HepG2U2AF2
chr161514143315141499-intron-Distal,intron-Proximal3.486883.90173HepG2RBM5
chr161514967315149742-intron-Distal,intron-Proximal5.5168715.28751HepG2EFTUD2
chr161514141615141506-intron-Distal,intron-Proximal4.289234.07325HepG2SF3B4
chr161514144615141508-intron-Distal,intron-Proximal4.569824.45977HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NTAN1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NTAN1 is not available on ENCORE database.

  • 95 RBPs can affect the levels of NTAN1.  








The Knockdown/knockout RNA-Seq assay for NTAN1 is not available on ENCORE database.





95 RBPs can affect the gene expression of NTAN1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NTAN1ENSG00000157045.4474.51200689.50150-0.539104.340803.02610HepG2AATF
NTAN1ENSG00000157045.4908.564801445.09890-0.669505.955505.20940HepG2AKAP1
NTAN1ENSG00000157045.4753.556201195.70630-0.666106.606805.41820HepG2ASCC1
NTAN1ENSG00000157045.4985.870601269.99220-0.365302.892701.45540HepG2ATP5C1
NTAN1ENSG00000157045.4859.010801211.06710-0.495506.964805.95560HepG2AUH
NTAN1ENSG00000157045.4420.187101155.46790-1.4594014.4197013.20490HepG2BOP1
NTAN1ENSG00000157045.41022.559201301.01840-0.347503.308102.47410HepG2CALR
NTAN1ENSG00000157045.4654.615701136.00060-0.795209.198207.85740HepG2CIRBP
NTAN1ENSG00000157045.4455.99940785.87900-0.7853014.1965012.93350HepG2CKAP4
NTAN1ENSG00000157045.4539.982301079.78260-0.999808.227106.92520HepG2CNOT7
NTAN1ENSG00000157045.4664.112501060.81880-0.675704.268403.43120HepG2CPSF6
NTAN1ENSG00000157045.41013.32690760.583900.413803.362602.61980HepG2DDX21
NTAN1ENSG00000157045.4606.408801384.31330-1.1908018.7769017.29920HepG2DDX3X
NTAN1ENSG00000157045.4964.726201332.67510-0.466103.310602.21270HepG2DDX5
NTAN1ENSG00000157045.4558.51830807.61580-0.532107.756206.73640HepG2DNAJC2
NTAN1ENSG00000157045.4503.16910759.98180-0.594905.000803.51090HepG2EFTUD2
NTAN1ENSG00000157045.4566.873001143.16370-1.0119013.2845012.05380HepG2EIF2S1
NTAN1ENSG00000157045.4659.098601263.35050-0.9387010.899109.65890HepG2EIF4A3
NTAN1ENSG00000157045.4329.056301230.01040-1.9023029.5650027.51140HepG2EIF4B
NTAN1ENSG00000157045.4889.781401130.79690-0.345802.470301.69960HepG2EIF4G2
NTAN1ENSG00000157045.41021.020301390.44590-0.445506.126105.29210HepG2ETF1
NTAN1ENSG00000157045.4821.392401119.42220-0.446603.062801.32450HepG2FMR1
NTAN1ENSG00000157045.4654.362101062.56150-0.699402.641101.64950HepG2FTO
NTAN1ENSG00000157045.4724.006501084.69120-0.583206.414805.24610HepG2FUBP3
NTAN1ENSG00000157045.4779.095901182.41660-0.601905.226704.32560HepG2G3BP1
NTAN1ENSG00000157045.4982.344001255.24470-0.353702.370301.54960HepG2G3BP2
NTAN1ENSG00000157045.4697.241901202.62030-0.786506.137505.20970HepG2GPKOW
NTAN1ENSG00000157045.4629.10900822.59650-0.386902.716202.07540HepG2HNRNPA1
NTAN1ENSG00000157045.4636.05280892.20400-0.488202.990401.53310HepG2HNRNPAB
NTAN1ENSG00000157045.4854.392601197.22870-0.486704.249903.39950HepG2HNRNPK
NTAN1ENSG00000157045.4674.350101089.97440-0.6927014.3368012.91290HepG2HNRNPL
NTAN1ENSG00000157045.4834.665501147.67370-0.459402.766902.13740HepG2HNRNPLL
NTAN1ENSG00000157045.4529.63160908.94340-0.7792014.4879013.19160HepG2HNRNPU
NTAN1ENSG00000157045.4701.451201201.91210-0.776908.596707.47790HepG2IGF2BP2
NTAN1ENSG00000157045.4697.756401208.89680-0.792906.928205.25920HepG2KHSRP
NTAN1ENSG00000157045.4976.473101452.55000-0.572903.881802.39260HepG2KRR1
NTAN1ENSG00000157045.4546.89480729.83600-0.416303.031201.75940HepG2LIN28B
NTAN1ENSG00000157045.4625.066401275.05120-1.0285014.0984012.66780HepG2MAGOH
NTAN1ENSG00000157045.4623.929801282.19740-1.0392013.0390011.74390HepG2MATR3
NTAN1ENSG00000157045.4925.380501150.11630-0.313702.351701.60320HepG2MSI2
NTAN1ENSG00000157045.4727.966501312.40850-0.850309.820508.66990HepG2NCBP2
NTAN1ENSG00000157045.4462.00270628.59320-0.444203.208901.68840HepG2NIP7
NTAN1ENSG00000157045.4744.959801377.59250-0.886908.261105.85140HepG2NKRF
NTAN1ENSG00000157045.4930.184501186.49570-0.351103.454302.60340HepG2NOL12
NTAN1ENSG00000157045.4707.054801017.56000-0.525203.386302.55840HepG2NSUN2
NTAN1ENSG00000157045.4621.133601168.82250-0.9121011.193609.76800HepG2PABPC4
NTAN1ENSG00000157045.4777.338301174.67530-0.5956010.312009.25900HepG2PCBP1
NTAN1ENSG00000157045.4750.262301064.92210-0.505307.162205.98710HepG2PRPF4
NTAN1ENSG00000157045.4204.38320435.29900-1.090709.703208.29940HepG2PRPF8
NTAN1ENSG00000157045.4627.790001195.22980-0.9289020.7578019.52580HepG2PTBP1
NTAN1ENSG00000157045.4505.109301132.60630-1.1650021.8852020.42230HepG2PUF60
NTAN1ENSG00000157045.4709.848101202.30260-0.7602018.7716017.50600HepG2PUM1
NTAN1ENSG00000157045.4656.43730800.67830-0.286602.488901.89660HepG2PUS1
NTAN1ENSG00000157045.4683.192501294.56200-0.9221018.6932017.27160HepG2QKI
NTAN1ENSG00000157045.41229.66210819.094500.586103.043902.30680HepG2RAVER1
NTAN1ENSG00000157045.42052.775501535.546600.418704.370403.32330HepG2RBM15
NTAN1ENSG00000157045.4942.916001174.86090-0.317302.586901.93180HepG2RBM25
NTAN1ENSG00000157045.4652.92910838.33370-0.360602.358801.45140HepG2RBM27
NTAN1ENSG00000157045.41110.675401330.21440-0.260202.624902.09560HepG2NELFE
NTAN1ENSG00000157045.41012.128701238.84430-0.291603.116802.46810HepG2RECQL
NTAN1ENSG00000157045.41720.554801047.355800.7160010.264209.09260HepG2RPLP0
NTAN1ENSG00000157045.4575.70630804.50640-0.482802.413001.53010HepG2RPS10
NTAN1ENSG00000157045.4478.65950722.72560-0.594404.816503.59110HepG2SERBP1
NTAN1ENSG00000157045.4743.625101244.47140-0.7429014.8919013.68560HepG2SF3B4
NTAN1ENSG00000157045.4931.999001085.97430-0.220602.045301.42480HepG2SLBP
NTAN1ENSG00000157045.41637.993401312.624600.319404.386603.79800HepG2SRFBP1
NTAN1ENSG00000157045.4948.352701298.92490-0.453806.733006.07380HepG2SRSF1
NTAN1ENSG00000157045.4792.250401118.27290-0.497207.048106.11330HepG2SRSF5
NTAN1ENSG00000157045.4874.109901139.68260-0.382704.720304.08620HepG2SSB
NTAN1ENSG00000157045.4999.154401271.79360-0.348104.844404.06210HepG2SUCLG1
NTAN1ENSG00000157045.4948.940801466.44980-0.627903.528902.01440HepG2SUGP2
NTAN1ENSG00000157045.4364.96100561.84280-0.622404.107803.30760HepG2SUPV3L1
NTAN1ENSG00000157045.4702.083301118.36260-0.671705.171304.22500HepG2TARDBP
NTAN1ENSG00000157045.4685.88240883.18310-0.364802.991802.47480HepG2TIAL1
NTAN1ENSG00000157045.4902.988701106.49360-0.293202.169101.40130HepG2TUFM
NTAN1ENSG00000157045.4843.950301171.19640-0.472803.200902.30100HepG2UBE2L3
NTAN1ENSG00000157045.4474.51440331.876600.515702.971902.18830HepG2UCHL5
NTAN1ENSG00000157045.4644.140101006.02330-0.6432011.2532010.01850HepG2UPF1
NTAN1ENSG00000157045.4764.800001034.05600-0.435205.283003.87760HepG2UTP18
NTAN1ENSG00000157045.4606.50840971.27690-0.6794010.979009.91380HepG2UTP3
NTAN1ENSG00000157045.4812.38030553.073600.554603.728202.89580HepG2XRN2
NTAN1ENSG00000157045.4729.091001050.94170-0.527508.548607.47700HepG2ZC3H8
NTAN1ENSG00000157045.4751.05740393.745400.9316015.0727013.85770K562AGGF1
NTAN1ENSG00000157045.4634.90660432.632800.553304.400503.09550K562AKAP8
NTAN1ENSG00000157045.4636.41960409.701600.635305.462604.52860K562AKAP8L
NTAN1ENSG00000157045.4649.23850470.574300.464203.663502.27920K562CCDC124
NTAN1ENSG00000157045.4106.59860172.10980-0.691102.777801.86320K562EFTUD2
NTAN1ENSG00000157045.4206.71560282.65540-0.451402.333701.66440K562EIF2S2
NTAN1ENSG00000157045.4483.39420362.447000.415302.366701.58260K562FIP1L1
NTAN1ENSG00000157045.4179.28890291.17870-0.699604.833603.64300K562HNRNPU
NTAN1ENSG00000157045.4588.49390434.824900.436502.736901.91550K562KIF1C
NTAN1ENSG00000157045.4685.31590487.109700.492403.707002.62900K562MBNL1
NTAN1ENSG00000157045.4499.30020341.426000.548202.674901.80990K562NAA15
NTAN1ENSG00000157045.4156.11060234.63970-0.587902.653901.69530K562PCBP2
NTAN1ENSG00000157045.4259.26090399.77340-0.624803.611802.66020K562PCBP3
NTAN1ENSG00000157045.4174.88880306.64700-0.810105.867804.70510K562POLR2G
NTAN1ENSG00000157045.4782.39690406.371100.9450010.859909.83200K562PUS1
NTAN1ENSG00000157045.4692.50030395.898100.806607.496906.55070K562RBM15
NTAN1ENSG00000157045.4292.94080190.900300.617703.444401.94230K562RBM25
NTAN1ENSG00000157045.4311.06030195.087800.673003.576302.29890K562U2AF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NTAN1 is not available on ENCORE database.





16 RBPs can affect the splicing of NTAN1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.157000.000040.05402excludedHepG2IGF2BP1
SENTAN1ENSG00000157045.4chr16-1514185315141956151417111514177715149747151499210.121000.000150.00407includedHepG2U2AF1
SENTAN1ENSG00000157045.4chr16-151417111514177715141072151414071514974715149800-0.123000.003080.07327excludedK562AKAP8L
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.322000.000000.00000excludedHepG2SRSF7
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.107000.002630.09068excludedHepG2SFPQ
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.239000.000190.01327excludedHepG2PTBP1
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.138000.000460.06654excludedHepG2HNRNPA1
SENTAN1ENSG00000157045.4chr16-1514185315141956151417111514177715149747151499210.151000.000090.02370includedK562LARP4
SENTAN1ENSG00000157045.4chr16-1514193415141956151417111514177715149747151498960.419000.001270.08947includedHepG2DDX6
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.172000.000910.09254excludedHepG2PCBP2
SENTAN1ENSG00000157045.4chr16-151417111514177715141072151414071514974715149800-0.095000.000020.00115excludedHepG2SF3A3
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.410000.000000.00000excludedHepG2TIAL1
SENTAN1ENSG00000157045.4chr16-151417111514177715141072151414071514974715149800-0.141000.000800.02310excludedK562AGGF1
SENTAN1ENSG00000157045.4chr16-151417111514177715141072151414071514974715149800-0.146000.000000.00004excludedHepG2HNRNPU
SENTAN1ENSG00000157045.4chr16-151418531514195615141711151417771514974715149921-0.148000.000140.00813excludedHepG2HNRNPC
A3SSNTAN1ENSG00000157045.4chr16-1513382515134006151338251513392315134924151349780.133000.000000.00000longerK562AQR
A3SSNTAN1ENSG00000157045.4chr16-1513492415135037151349241513497815135479151355330.079000.000170.00141longerK562AQR
A3SSNTAN1ENSG00000157045.4chr16-1513200115132195151320011513206715132430151325440.114000.000130.00107longerK562AQR
A3SSNTAN1ENSG00000157045.4chr16-1513246415132616151324641513254415133825151340060.071000.000040.00034longerK562AQR
MXENTAN1ENSG00000157045.4chr16-15141274151414071514140715141510151381901513826415141711151417770.072000.003920.029341includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NTAN1 is not avaliable on ENCORE database.