NOL6

General Information

Gene Name       : NOL6
Gene ID             : ENSG00000165271.16
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NOL6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NOL6ENSG00000165271.1616.8925.0920.99ENCSR000AEF
HepG2NOL6ENSG00000165271.1627.9919.8123.90ENCSR985KAT
K562NOL6ENSG00000165271.1636.9833.5635.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NOL6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NOL6 RNA is bound by 11 proteins.  







eCLIP assay for NOL6 is not avaliable on ENCORE database.





11 proteins are bound to NOL6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93346149333461600-3'-UTR,intron-Distal3.926727.87505K562UPF1
chr93346166333461756-3'-UTR,intron-Distal3.286454.61790K562UPF1
chr93346183033461942-3'-UTR,intron-Distal5.6807012.02344K562UPF1
chr93346206433462152-3'-UTR,intron-Distal,intron-Proximal5.387628.76530K562UPF1
chr93346241533462502-3'-UTR,intron-Distal,intron-Proximal3.404044.27354HepG2UPF1
chr93346224133462311-3'-UTR,intron-Distal3.392944.61367K562UPF1
chr93346198633462046-3'-UTR,intron-Distal,intron-Proximal4.706345.24231K562UPF1
chr93346200533462104-3'-UTR,intron-Distal,intron-Proximal4.099013.70195HepG2UPF1
chr93346221433462372-3'-UTR,intron-Distal5.2261610.05440HepG2UPF1
chr93346223633462378-3'-UTR,intron-Distal4.096056.68355HepG2AKAP1
chr93346414133464210-5'-UTR,CDS,intron-Distal,intron-Proximal5.137955.40008K562SF3B4
chr93346413333464169-5'-UTR,CDS,intron-Distal,intron-Proximal4.924995.74423HepG2BUD13
chr93347378633473895-5'-UTR,CDS,intron-Distal3.832354.08283K562DDX3X
chr93346846233468557-CDS,intron-Distal,intron-Proximal4.056308.47952HepG2PRPF8
chr93346739033467489-CDS,intron-Distal,intron-Proximal3.1942511.01599HepG2PPIG
chr93346619733466217-CDS,intron-Distal,intron-Proximal4.031734.12139K562DDX24
chr93346854333468607-CDS,intron-Distal,intron-Proximal4.265366.11702K562SF3B4
chr93346781733467864-CDS,intron-Distal4.212096.36347HepG2PPIG
chr93346613533466161-CDS,intron-Distal5.031734.75872K562DDX24
chr93346375633463830-CDS,intron-Distal,intron-Proximal5.035845.26064K562AQR
chr93346784433467899-CDS,intron-Distal,intron-Proximal3.160704.64824K562PRPF8
chr93346617633466223-CDS,intron-Distal,intron-Proximal4.6236811.47295HepG2PPIG
chr93347216933472212-CDS,intron-Distal,intron-Proximal4.245663.49003K562PRPF8
chr93346853833468601-CDS,intron-Distal,intron-Proximal3.309433.75245K562BUD13
chr93346639233466482-CDS,intron-Distal,intron-Proximal3.1017010.09468K562SF3B4
chr93347200133472074-CDS,intron-Distal,intron-Proximal3.888617.09278HepG2PPIG
chr93346832033468354-CDS,intron-Distal3.853715.80295HepG2PPIG
chr93346378833463858-CDS,intron-Distal,intron-Proximal3.470313.98203HepG2PRPF8
chr93346403433464056-CDS,intron-Distal,intron-Proximal5.400215.34688K562DDX24
chr93346834033468344-CDS,intron-Distal5.093163.59565K562DDX24
chr93346870333468755-CDS,intron-Distal,intron-Proximal3.919627.75444K562PRPF8
chr93346630533466383-CDS,intron-Distal,intron-Proximal5.7766612.89244HepG2PPIG
chr93346693133466985-CDS,intron-Distal3.515063.95937K562UCHL5
chr93346581033465848-CDS,intron-Distal5.075516.16445HepG2PPIG
chr93346870333468777-CDS,intron-Distal,intron-Proximal4.496519.38298HepG2PRPF8
chr93346752133467557-intron-Distal,intron-Proximal6.0162751.51942HepG2SF3B4
chr93346869333468741-intron-Distal,intron-Proximal5.271675.99517HepG2EFTUD2
chr93346940133469458-intron-Distal,intron-Proximal5.271675.99517HepG2EFTUD2
chr93346868833468744-intron-Distal,intron-Proximal5.211775.02942K562EFTUD2
chr93347186033471915-intron-Distal,intron-Proximal5.289836.63358K562EFTUD2
chr93346752133467551-intron-Distal,intron-Proximal5.2876519.10916K562SF3B4
chr93346755733467569-intron-Distal,intron-Proximal5.9456948.55079HepG2SF3B4
chr93346935533469400-intron-Distal,intron-Proximal4.816195.13952K562SF3B4
chr93346755133467568-intron-Distal,intron-Proximal5.7420818.61357K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NOL6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NOL6 is not available on ENCORE database.

  • 95 RBPs can affect the levels of NOL6.  








The Knockdown/knockout RNA-Seq assay for NOL6 is not available on ENCORE database.





95 RBPs can affect the gene expression of NOL6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NOL6ENSG00000165271.121120.29690720.545900.636605.492804.21510HepG2ABCF1
NOL6ENSG00000165271.121569.68710734.896201.0948014.3784013.26430HepG2AKAP1
NOL6ENSG00000165271.12617.00120740.53200-0.263301.973801.31140HepG2AKAP8L
NOL6ENSG00000165271.12495.31600671.42200-0.438902.872901.95510HepG2BCLAF1
NOL6ENSG00000165271.121296.92140664.681000.9643015.2989014.05050HepG2BOP1
NOL6ENSG00000165271.12397.20390539.77860-0.442502.970701.69590HepG2BUD13
NOL6ENSG00000165271.12945.96610736.889300.360204.269203.47710HepG2CKAP4
NOL6ENSG00000165271.12430.49020610.18580-0.503302.769802.08260HepG2CPSF6
NOL6ENSG00000165271.12327.79940476.04870-0.538302.653301.33880HepG2CSTF2T
NOL6ENSG00000165271.121008.51500806.980000.321503.104902.43180HepG2CELF1
NOL6ENSG00000165271.12979.89540703.929100.477103.410402.72470HepG2DDX3X
NOL6ENSG00000165271.12570.90240705.23590-0.304902.319501.69020HepG2DKC1
NOL6ENSG00000165271.12557.30500398.346800.484303.041401.88240HepG2EFTUD2
NOL6ENSG00000165271.12647.34150387.902700.738705.686604.42170HepG2EIF3D
NOL6ENSG00000165271.12839.78010642.352300.386502.132101.56840HepG2EIF4A3
NOL6ENSG00000165271.121304.28600625.519201.0600010.944509.62290HepG2EIF4B
NOL6ENSG00000165271.121112.77960856.033900.378304.447903.42790HepG2EIF4G1
NOL6ENSG00000165271.12606.23720820.01710-0.435803.048602.19440HepG2EIF4G2
NOL6ENSG00000165271.121142.81450720.239200.665908.719807.25190HepG2EWSR1
NOL6ENSG00000165271.12462.29490632.43020-0.452102.983801.66590HepG2FKBP4
NOL6ENSG00000165271.12610.82720439.091700.476103.367102.50390HepG2FUBP3
NOL6ENSG00000165271.12809.72320601.276900.429302.651001.99880HepG2G3BP1
NOL6ENSG00000165271.121352.93790609.040301.1514019.9070018.18720HepG2HNRNPK
NOL6ENSG00000165271.12376.19720660.03020-0.811005.153404.32200HepG2HNRNPLL
NOL6ENSG00000165271.12737.19820501.933300.554504.981403.74420HepG2HNRNPM
NOL6ENSG00000165271.12886.72320611.155500.536804.161203.34820HepG2IGF2BP2
NOL6ENSG00000165271.12824.31630648.490600.346001.896001.34770HepG2MAGOH
NOL6ENSG00000165271.121502.40570652.094601.2040017.6486016.16420HepG2MATR3
NOL6ENSG00000165271.12597.17570405.966800.556702.492401.49070HepG2METAP2
NOL6ENSG00000165271.12800.13850588.757200.442503.352002.46470HepG2MSI2
NOL6ENSG00000165271.12357.38400673.31030-0.913805.745904.32210HepG2MTPAP
NOL6ENSG00000165271.121126.42970667.434300.755007.520106.49990HepG2NCBP2
NOL6ENSG00000165271.12360.13480585.29790-0.700604.598803.64100HepG2NSUN2
NOL6ENSG00000165271.12975.46300594.298400.714806.860605.73180HepG2PABPC4
NOL6ENSG00000165271.12751.86820540.972100.474803.528802.58360HepG2PARN
NOL6ENSG00000165271.121098.43740627.786200.8070013.5489012.36720HepG2PCBP1
NOL6ENSG00000165271.121045.13700821.303300.347602.740902.14690HepG2PUF60
NOL6ENSG00000165271.121421.80580871.867700.7054018.8536017.58500HepG2PUM1
NOL6ENSG00000165271.12612.95570750.83180-0.292702.511001.91640HepG2PUS1
NOL6ENSG00000165271.12856.52540691.858300.307902.182901.61680HepG2QKI
NOL6ENSG00000165271.122323.795301259.327600.8837021.2746020.11030HepG2RBM22
NOL6ENSG00000165271.12792.08310627.885500.335102.218001.60880HepG2RBM25
NOL6ENSG00000165271.12909.86730575.831800.659905.326303.93600HepG2RBM27
NOL6ENSG00000165271.12867.05610710.911400.286402.144201.65610HepG2NELFE
NOL6ENSG00000165271.12855.735101073.53560-0.327102.379501.73820HepG2RPLP0
NOL6ENSG00000165271.12690.49190377.459400.8712010.268409.17300HepG2RPS19
NOL6ENSG00000165271.12827.29730531.021100.639505.043603.98220HepG2RPS2
NOL6ENSG00000165271.12993.25400542.109400.873507.948306.13260HepG2RPS5
NOL6ENSG00000165271.12572.04880378.818700.594504.286203.12380HepG2SERBP1
NOL6ENSG00000165271.121153.70980790.614500.545103.351102.60740HepG2SF3A3
NOL6ENSG00000165271.12933.99680665.088100.489803.945603.25990HepG2SF3B4
NOL6ENSG00000165271.12718.59640567.582800.340303.327702.63310HepG2SMN1
NOL6ENSG00000165271.12943.09500488.218000.949809.041707.25390HepG2SMNDC1
NOL6ENSG00000165271.12915.965201422.34130-0.6349013.3850012.50350HepG2SRFBP1
NOL6ENSG00000165271.121039.82220694.189400.582808.533707.80750HepG2SRSF1
NOL6ENSG00000165271.121127.01410810.938900.474706.883305.95720HepG2SRSF5
NOL6ENSG00000165271.12917.510801234.88900-0.428606.189205.47870HepG2SSB
NOL6ENSG00000165271.121340.05130922.242500.5390010.403709.32850HepG2SUCLG1
NOL6ENSG00000165271.12464.05910756.37650-0.704806.170705.22070HepG2SUPV3L1
NOL6ENSG00000165271.12739.68980573.345700.367402.653401.83280HepG2TIA1
NOL6ENSG00000165271.12806.02920535.817600.589008.334707.43990HepG2TRIM56
NOL6ENSG00000165271.121082.23070802.407900.431502.173001.40440HepG2TUFM
NOL6ENSG00000165271.12743.47050446.764900.734706.392605.23310HepG2UCHL5
NOL6ENSG00000165271.12462.23540692.41640-0.583003.865502.66700HepG2UPF2
NOL6ENSG00000165271.121138.07480676.937300.7494014.9840013.75730HepG2UTP3
NOL6ENSG00000165271.12784.49060525.719200.577403.478502.29130HepG2XRCC6
NOL6ENSG00000165271.12447.53550690.18520-0.625008.410007.34580HepG2ZC3H8
NOL6ENSG00000165271.121207.78090771.135700.6472010.845309.93900HepG2ZNF622
NOL6ENSG00000165271.122793.794202225.407100.328102.852701.60620K562ABCF1
NOL6ENSG00000165271.121545.977601151.623600.424803.918703.14000K562AKAP8L
NOL6ENSG00000165271.122965.436902411.560100.298203.212801.87650K562APOBEC3C
NOL6ENSG00000165271.12803.40980996.95920-0.311402.276201.55840K562CPSF6
NOL6ENSG00000165271.121526.673701087.478800.489303.570701.44810K562YBX3
NOL6ENSG00000165271.121871.823401397.404900.421606.558004.52750K562DDX27
NOL6ENSG00000165271.123535.280201870.574600.9182035.8944033.81600K562DDX47
NOL6ENSG00000165271.121308.88890972.166900.429005.366103.31870K562DDX6
NOL6ENSG00000165271.121520.856001239.353700.295202.913102.01240K562DKC1
NOL6ENSG00000165271.121570.937902366.71650-0.5913012.7633011.39160K562EIF2S2
NOL6ENSG00000165271.121949.074101012.741300.944405.755504.26850K562EIF3A
NOL6ENSG00000165271.122070.292101605.487500.366702.305301.37040K562EIF3D
NOL6ENSG00000165271.121614.45700608.669201.4072045.7707042.55430K562EIF3G
NOL6ENSG00000165271.121166.76430902.152200.371002.829201.65700K562EIF4B
NOL6ENSG00000165271.121190.846201599.87890-0.426003.960602.93440K562FIP1L1
NOL6ENSG00000165271.12719.206601037.38170-0.528503.200801.97150K562FKBP4
NOL6ENSG00000165271.12766.946301014.47950-0.403502.419601.61740K562FMR1
NOL6ENSG00000165271.122121.623701041.808301.0260032.3305030.39130K562FXR1
NOL6ENSG00000165271.12246.18450539.20380-1.1311010.118708.60570K562G3BP2
NOL6ENSG00000165271.121311.68880951.810500.462602.551901.78740K562GPKOW
NOL6ENSG00000165271.121647.208502168.95830-0.397003.618002.71250K562HSPD1
NOL6ENSG00000165271.121177.32890861.972900.449704.525103.44350K562MAGOH
NOL6ENSG00000165271.121384.16790860.164900.6862010.205108.32770K562MATR3
NOL6ENSG00000165271.121938.693801546.858000.325603.413702.52010K562MTPAP
NOL6ENSG00000165271.12972.40400766.871200.342502.496801.56880K562PCBP2
NOL6ENSG00000165271.121385.799602092.80840-0.594706.161204.91630K562PCBP3
NOL6ENSG00000165271.121244.248901605.23450-0.367503.963702.99910K562POLR2G
NOL6ENSG00000165271.121922.827801459.426900.397703.290702.47120K562PRPF8
NOL6ENSG00000165271.121393.82580837.489800.7348011.9164010.59180K562PTBP1
NOL6ENSG00000165271.123505.638002981.884500.233402.116401.40270K562PUF60
NOL6ENSG00000165271.121283.74840802.839600.677108.516306.92360K562RBM22
NOL6ENSG00000165271.121072.99860844.910100.344702.361101.36810K562NELFE
NOL6ENSG00000165271.122317.313201486.387500.640506.430805.17560K562RPS19
NOL6ENSG00000165271.122292.790901430.368400.6806011.212909.14110K562SAFB
NOL6ENSG00000165271.121103.91000670.540400.719102.682801.50480K562SF1
NOL6ENSG00000165271.12951.03640560.415400.7629011.261809.46940K562SF3B4
NOL6ENSG00000165271.121988.118501737.424800.194402.131901.30130K562SRPK2
NOL6ENSG00000165271.122490.060001610.121000.6289011.528309.86200K562SYNCRIP
NOL6ENSG00000165271.121163.76150830.875000.486002.235601.59510K562TARDBP
NOL6ENSG00000165271.121016.00050801.497500.342002.750401.93560K562TIA1
NOL6ENSG00000165271.121423.985201094.701200.379303.277102.22880K562TRIM56
NOL6ENSG00000165271.122045.817102690.77370-0.395302.570001.35250K562TROVE2
NOL6ENSG00000165271.121175.745001495.32700-0.346902.645401.65140K562UCHL5
NOL6ENSG00000165271.121582.978001988.35160-0.328903.128701.32800K562UPF2
NOL6ENSG00000165271.121137.593301559.46330-0.455105.214003.99310K562WDR3
NOL6ENSG00000165271.122379.144801621.553600.5530014.4482012.70710K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NOL6 is not available on ENCORE database.





6 RBPs can affect the splicing of NOL6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENOL6ENSG00000165271.12chr9-334680073346814333467391334675143346831833468420-0.097000.007800.06670excludedK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346800733468223334680073346814333468318334685550.153000.000000.00000longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346920433469377334692043346933933469496334696650.107000.000110.00098longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346949633469716334694963346966533470009334702530.130000.000000.00000longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346630533466459334663053346642333466566334667070.161000.000000.00003longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3347000933470253334700093347018933472001334721180.054000.000540.00402longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346382933463947334638293346391833464034334641590.115000.000010.00009longerK562AQR
A3SSNOL6ENSG00000165271.12chr9-3346487633465055334648763346497433465204334653570.079000.001250.00851longerK562AQR
A5SSNOL6ENSG00000165271.12chr9-3346800733468167334680273346816733467688334678660.153000.001280.02303longerK562AQR
RINOL6ENSG00000165271.12chr9-3346831833468555334683183346842033468505334685550.114000.000930.01687includedK562SF3B4
RINOL6ENSG00000165271.12chr9-3346831833468555334683183346842033468505334685550.104000.004650.07082includedHepG2PCBP2
RINOL6ENSG00000165271.12chr9-3346831833468555334683183346842033468505334685550.158000.000280.00470includedHepG2SF3A3
RINOL6ENSG00000165271.12chr9-3346831833468555334683183346842033468505334685550.231000.000000.00000includedK562BUD13
RINOL6ENSG00000165271.12chr9-3346831833468555334683183346842033468505334685550.098000.000000.00000includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346800733468191334673913346751433468318334684200.135000.000370.003821includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346802733468223334673913346751433468318334684200.126000.002490.020021includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346800733468223334673913346751433468318334684200.155000.000100.001251includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346800733468174334673913346751433468318334684200.060000.013670.081321includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346802733468191334673913346751433468318334684200.105000.008130.053541includedK562AQR
MXENOL6ENSG00000165271.12chr9-33467688334678663346800733468167334673913346751433468318334684200.112000.004640.033711includedK562AQR
MXENOL6ENSG00000165271.12chr9-33469496334696653347000933470189334692043346933933472001334721180.189000.003490.050841includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NOL6 is not avaliable on ENCORE database.