NDUFB5

General Information

Gene Name       : NDUFB5
Gene ID             : ENSG00000136521.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NDUFB5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFB5ENSG00000136521.1273.7572.6273.19ENCSR000AEF
HepG2NDUFB5ENSG00000136521.1229.9573.6651.80ENCSR985KAT
K562NDUFB5ENSG00000136521.12106.42111.72109.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFB5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFB5 RNA is bound by 17 proteins.  







eCLIP assay for NDUFB5 is not avaliable on ENCORE database.





17 proteins are bound to NDUFB5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3179342179179342215+3'-UTR7.06247400.00000K562PABPC4
chr3179342146179342160+3'-UTR4.0700425.12345K562PUM2
chr3179342139179342196+3'-UTR3.8381714.13637K562ZC3H11A
chr3179342052179342111+3'-UTR4.043999.05952HepG2SUB1
chr3179333769179333838+3'-UTR,CDS,intron-Distal,intron-Proximal4.909749.05620HepG2SUB1
chr3179342160179342204+3'-UTR3.8927428.13442K562PUM2
chr3179342167179342198+3'-UTR3.477027.10953K562NOLC1
chr3179342168179342201+3'-UTR5.8980154.74456HepG2SUB1
chr3179336198179336310+3'-UTR,CDS,intron-Distal,intron-Proximal3.759156.75520K562LIN28B
chr3179332757179332826+3'-UTR,CDS,intron-Distal,intron-Proximal3.2687714.22444K562DDX3X
chr3179342120179342210+3'-UTR4.063399.99818K562APOBEC3C
chr3179342146179342200+3'-UTR3.032777.49618K562CPEB4
chr3179342142179342168+3'-UTR5.5239655.07594HepG2SUB1
chr3179341925179341999+3'-UTR4.619665.87734K562LIN28B
chr3179342120179342213+3'-UTR3.6990112.89613K562FAM120A
chr3179341963179342028+3'-UTR3.172746.54251K562UPF1
chr3179342146179342179+3'-UTR6.39749400.00000K562PABPC4
chr3179342111179342142+3'-UTR4.6247715.37344HepG2SUB1
chr3179342113179342146+3'-UTR3.162677.13301K562PUM2
chr3179342140179342174+3'-UTR3.124773.06247HepG2DDX55
chr3179342114179342146+3'-UTR3.849128.78304K562PABPC4
chr3179332758179332780+3'-UTR,CDS,intron-Distal,intron-Proximal5.773226.24391K562GEMIN5
chr3179322593179322691+5'-UTR,CDS3.6321521.49244K562DDX3X
chr3179322595179322683+5'-UTR,CDS4.9786926.39298K562RPS3
chr3179322581179322738+5'-UTR,CDS,intron-Proximal5.5191519.84768K562GEMIN5
chr3179322701179322779+CDS,intron-Proximal3.154263.43910HepG2PRPF8
chr3179322638179322687+CDS3.630233.41711K562DROSHA
chr3179324939179325113+intron-Distal3.999784.10688K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFB5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFB5 is not available on ENCORE database.

  • 88 RBPs can affect the levels of NDUFB5.  








The Knockdown/knockout RNA-Seq assay for NDUFB5 is not available on ENCORE database.





88 RBPs can affect the gene expression of NDUFB5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFB5ENSG00000136521.81205.069301562.28530-0.374502.457501.71340HepG2ASCC1
NDUFB5ENSG00000136521.8982.51590771.963500.347802.800402.02460HepG2CALR
NDUFB5ENSG00000136521.81117.620901484.27400-0.409303.136902.31570HepG2CIRBP
NDUFB5ENSG00000136521.81064.585901553.65480-0.545404.464003.69440HepG2DDX6
NDUFB5ENSG00000136521.8835.993901493.63740-0.8373010.448709.34240HepG2EIF2S1
NDUFB5ENSG00000136521.81223.772501650.67940-0.431702.997202.33150HepG2EIF4A3
NDUFB5ENSG00000136521.8967.085101607.10220-0.732706.049605.06130HepG2EIF4B
NDUFB5ENSG00000136521.8847.388701674.78600-0.9829028.0587026.47880HepG2ETF1
NDUFB5ENSG00000136521.8949.208401665.36190-0.8110010.473009.21130HepG2FXR1
NDUFB5ENSG00000136521.8939.991501544.92230-0.716807.608206.53100HepG2G3BP1
NDUFB5ENSG00000136521.81155.466401640.06130-0.505304.644803.47780HepG2G3BP2
NDUFB5ENSG00000136521.8674.43800945.80750-0.487902.642201.55720HepG2GRSF1
NDUFB5ENSG00000136521.8349.92760678.18000-0.954607.613806.62190HepG2HNRNPA1
NDUFB5ENSG00000136521.81415.466501150.521300.298903.261302.25720HepG2HNRNPA2B1
NDUFB5ENSG00000136521.8916.330101564.24560-0.7715010.409809.13330HepG2HNRNPK
NDUFB5ENSG00000136521.8968.03540603.463100.681706.617205.69030HepG2HNRNPLL
NDUFB5ENSG00000136521.8994.193301570.39930-0.659507.175806.13890HepG2IGF2BP2
NDUFB5ENSG00000136521.8978.630801473.67330-0.590602.245601.36850HepG2IGF2BP3
NDUFB5ENSG00000136521.8949.886801665.94290-0.8105010.065508.83680HepG2MAGOH
NDUFB5ENSG00000136521.8992.665601675.28390-0.755008.039207.01030HepG2MATR3
NDUFB5ENSG00000136521.8915.179601714.76000-0.9059011.9714010.69630HepG2NCBP2
NDUFB5ENSG00000136521.8404.56610706.43080-0.804203.261102.06500HepG2NONO
NDUFB5ENSG00000136521.8917.426101527.16900-0.735208.269707.03530HepG2PABPC4
NDUFB5ENSG00000136521.8837.412001424.16040-0.766109.776808.74950HepG2PCBP1
NDUFB5ENSG00000136521.8830.91720667.885200.315002.729601.95970HepG2PRPF4
NDUFB5ENSG00000136521.8842.438201449.06000-0.7825016.3156015.20030HepG2PTBP1
NDUFB5ENSG00000136521.8921.451801185.00800-0.362903.085302.46200HepG2PUF60
NDUFB5ENSG00000136521.8916.576101257.91560-0.456708.091707.18760HepG2PUM1
NDUFB5ENSG00000136521.8966.943801257.01090-0.378503.813003.03000HepG2PUM2
NDUFB5ENSG00000136521.81091.101201569.53060-0.524507.787306.81950HepG2QKI
NDUFB5ENSG00000136521.81191.272801424.38840-0.257802.030001.44700HepG2RBM25
NDUFB5ENSG00000136521.81139.688101612.72820-0.500906.780005.99780HepG2NELFE
NDUFB5ENSG00000136521.8946.039601501.92200-0.6668013.1896011.99350HepG2RECQL
NDUFB5ENSG00000136521.81051.82660865.572700.281101.992501.40150HepG2RPLP0
NDUFB5ENSG00000136521.8347.20710520.43550-0.583904.556103.78800HepG2RPS19
NDUFB5ENSG00000136521.8503.36570804.24540-0.676004.113703.28330HepG2SF3A3
NDUFB5ENSG00000136521.8894.140201508.79550-0.7548014.6272013.43170HepG2SF3B4
NDUFB5ENSG00000136521.8599.27930778.26460-0.377001.868201.32230HepG2SMN1
NDUFB5ENSG00000136521.81086.03240664.605700.708402.968802.15800HepG2SNRNP70
NDUFB5ENSG00000136521.81132.624401574.80000-0.475507.495906.80630HepG2SRSF1
NDUFB5ENSG00000136521.8940.180301169.99550-0.315503.379502.70000HepG2SRSF5
NDUFB5ENSG00000136521.81017.308101281.13550-0.332702.092801.59900HepG2SRSF9
NDUFB5ENSG00000136521.81007.510901330.63060-0.401306.216205.35300HepG2SUCLG1
NDUFB5ENSG00000136521.81132.076001415.33650-0.322202.927002.35200HepG2TAF15
NDUFB5ENSG00000136521.8551.11180734.60300-0.414602.243101.72490HepG2TRIM56
NDUFB5ENSG00000136521.8538.63340714.32620-0.407302.657502.04100HepG2U2AF1
NDUFB5ENSG00000136521.8389.28980944.62100-1.278904.525303.24760HepG2U2AF2
NDUFB5ENSG00000136521.8934.70140784.430700.252802.447801.92420HepG2ZNF622
NDUFB5ENSG00000136521.82820.400702221.417100.344305.763004.99190K562AGGF1
NDUFB5ENSG00000136521.83116.280302311.462800.430904.848903.97520K562AKAP8L
NDUFB5ENSG00000136521.82321.002903737.08770-0.6872011.034009.97600K562AQR
NDUFB5ENSG00000136521.82880.323702425.238800.248002.650901.75740K562ATP5C1
NDUFB5ENSG00000136521.8549.15360778.88300-0.504204.051102.72740K562CCAR1
NDUFB5ENSG00000136521.83283.308702654.787800.306503.408502.08010K562CCDC124
NDUFB5ENSG00000136521.81082.782701477.33330-0.448305.919204.29400K562CSTF2
NDUFB5ENSG00000136521.83021.629002487.439600.280603.491502.49170K562DKC1
NDUFB5ENSG00000136521.8986.777801372.81000-0.476304.163103.02330K562EFTUD2
NDUFB5ENSG00000136521.81794.904102093.98940-0.222302.262201.60260K562EIF2S2
NDUFB5ENSG00000136521.81086.485301469.89890-0.436003.000401.92010K562EIF3D
NDUFB5ENSG00000136521.81253.176501669.43030-0.413805.577504.46190K562EIF3G
NDUFB5ENSG00000136521.81191.842601486.27370-0.318503.309502.02190K562EIF4B
NDUFB5ENSG00000136521.81105.542201440.63630-0.382004.238602.59320K562EWSR1
NDUFB5ENSG00000136521.82130.195101489.226200.516306.166304.86630K562FIP1L1
NDUFB5ENSG00000136521.81354.759701716.36520-0.341304.221503.49700K562FXR1
NDUFB5ENSG00000136521.82358.252101780.521700.405302.565901.88990K562G3BP2
NDUFB5ENSG00000136521.81109.747101351.90540-0.284802.058701.37000K562GPKOW
NDUFB5ENSG00000136521.81785.523202455.36460-0.459605.860504.32690K562HNRNPA1
NDUFB5ENSG00000136521.81015.913601683.64070-0.7288011.5334010.38760K562HNRNPC
NDUFB5ENSG00000136521.82170.148702718.94960-0.325303.383502.39700K562HNRNPU
NDUFB5ENSG00000136521.83088.033402018.921300.613008.642107.25410K562HSPD1
NDUFB5ENSG00000136521.83165.122902453.118100.367502.472001.69740K562KIF1C
NDUFB5ENSG00000136521.81141.879001630.25860-0.513705.677903.58060K562LARP7
NDUFB5ENSG00000136521.81163.376501501.17550-0.367803.387001.64720K562LSM11
NDUFB5ENSG00000136521.81852.844502440.06210-0.397203.078102.19050K562MAGOH
NDUFB5ENSG00000136521.82911.190601926.212800.595705.051703.74130K562NAA15
NDUFB5ENSG00000136521.81805.399702044.37920-0.179302.200401.52730K562NSUN2
NDUFB5ENSG00000136521.81578.869802171.25820-0.459603.727602.59330K562PCBP2
NDUFB5ENSG00000136521.82422.022201690.723900.518506.005904.71710K562PPIG
NDUFB5ENSG00000136521.81188.428401509.54800-0.345102.581501.71390K562PSIP1
NDUFB5ENSG00000136521.81505.499002370.58840-0.655006.752805.75150K562PTBP1
NDUFB5ENSG00000136521.83270.386704261.89550-0.382004.097803.11210K562PUF60
NDUFB5ENSG00000136521.83874.335004441.61840-0.197102.318501.43870K562PUM2
NDUFB5ENSG00000136521.82828.620502292.496800.303102.360901.85090K562PUS1
NDUFB5ENSG00000136521.82913.697102233.560200.383405.503104.69190K562RBM15
NDUFB5ENSG00000136521.81373.765402273.73080-0.726906.795405.41040K562RBM22
NDUFB5ENSG00000136521.81696.539702215.97950-0.385303.031201.55420K562RBM34
NDUFB5ENSG00000136521.81048.652301377.20820-0.393203.899302.72040K562RCC2
NDUFB5ENSG00000136521.81912.039601365.931300.485103.313501.85640K562RRP9
NDUFB5ENSG00000136521.81389.971102017.45600-0.537509.668008.21230K562SF3A3
NDUFB5ENSG00000136521.8955.266601285.60130-0.428502.929001.92780K562SF3B1
NDUFB5ENSG00000136521.81199.344101851.78930-0.6267010.531708.81270K562SF3B4
NDUFB5ENSG00000136521.8821.716001305.56260-0.668007.989305.98310K562SRFBP1
NDUFB5ENSG00000136521.81190.606502323.83970-0.9648012.0954010.61340K562SRSF1
NDUFB5ENSG00000136521.82499.664801953.798100.355403.149801.68530K562SSRP1
NDUFB5ENSG00000136521.81488.680502352.15170-0.659906.196005.10160K562TARDBP
NDUFB5ENSG00000136521.81644.355102268.84390-0.464404.027303.01230K562TIA1
NDUFB5ENSG00000136521.81689.685602225.76110-0.397503.266102.06120K562TRA2A
NDUFB5ENSG00000136521.8894.196301542.43270-0.7865011.687309.45200K562TRIM56
NDUFB5ENSG00000136521.82798.071802362.131100.244203.063701.72440K562TROVE2
NDUFB5ENSG00000136521.81819.719002167.70790-0.252503.102402.34300K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFB5 is not available on ENCORE database.





12 RBPs can affect the splicing of NDUFB5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFB5ENSG00000136521.8chr3+1793337701793338371793225961793227271793347701793348320.150000.000040.03460includedK562TAF15
SENDUFB5ENSG00000136521.8chr3+1793255451793256001793226941793227271793347701793348320.095000.000440.01067includedK562SRSF1
SENDUFB5ENSG00000136521.8chr3+179332758179332847179322489179322727179333770179333837-0.052000.000780.01716excludedK562SF3B4
SENDUFB5ENSG00000136521.8chr3+179332758179332847179322477179322727179334770179334832-0.091000.000040.00222excludedK562AKAP8L
SENDUFB5ENSG00000136521.8chr3+1793327391793328471793225981793227271793347701793348320.066000.000910.01133includedK562AQR
SENDUFB5ENSG00000136521.8chr3+179332758179332847179322477179322727179334770179334832-0.115000.002640.08114excludedK562FXR1
SENDUFB5ENSG00000136521.8chr3+179333770179333837179322596179322727179334770179334832-0.119000.001710.02640excludedK562PUS1
SENDUFB5ENSG00000136521.8chr3+179332739179332847179322598179322727179334770179334832-0.115000.000380.07152excludedK562GPKOW
SENDUFB5ENSG00000136521.8chr3+1793327391793328471793225981793227271793347701793348320.111000.000010.00028includedK562U2AF1
SENDUFB5ENSG00000136521.8chr3+179332758179332847179322477179322727179334770179334832-0.200000.000030.00132excludedK562U2AF1
SENDUFB5ENSG00000136521.8chr3+179332758179332847179322489179322727179334770179334832-0.199000.000030.00111excludedK562U2AF2
SENDUFB5ENSG00000136521.8chr3+179333770179333837179322596179322727179334770179334832-0.140000.000610.01863excludedK562AGGF1
SENDUFB5ENSG00000136521.8chr3+1793327581793328471793224771793227271793347701793348320.220000.000000.00000includedK562HNRNPC
MXENDUFB5ENSG00000136521.8chr3+179332758179332847179336202179336309179322489179322727179341707179342285-0.144000.000000.000002includedK562U2AF2
MXENDUFB5ENSG00000136521.8chr3+179333770179333837179334770179334832179332739179332847179336202179336309-0.119000.021060.096292includedHepG2U2AF2
MXENDUFB5ENSG00000136521.8chr3+179333770179333837179336202179336309179332739179332847179341707179342055-0.093000.000890.018062includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFB5 is not avaliable on ENCORE database.