NDUFB11

General Information

Gene Name       : NDUFB11
Gene ID             : ENSG00000147123.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFB11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFB11ENSG00000147123.1026.2028.8927.55ENCSR000AEF
HepG2NDUFB11ENSG00000147123.1060.8141.2451.03ENCSR985KAT
K562NDUFB11ENSG00000147123.1082.4348.1065.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFB11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFB11 RNA is bound by 13 proteins.  







eCLIP assay for NDUFB11 is not avaliable on ENCORE database.





13 proteins are bound to NDUFB11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX4700170047001776-3'-UTR,CDS,intron-Distal3.058366.93290K562PABPC4
chrX4700166247001694-3'-UTR,intron-Distal4.984496.00342K562RPS3
chrX4700163747001686-3'-UTR,intron-Distal5.2218211.52455K562PABPC4
chrX4700165047001721-3'-UTR,CDS,intron-Distal5.3920620.44168HepG2LARP4
chrX4700169947001840-3'-UTR,CDS,intron-Distal3.995913.57831HepG2SND1
chrX4700406647004087-5'-UTR,CDS,intron-Distal3.618925.06399K562DDX3X
chrX4700398347004016-CDS,intron-Distal3.6346516.05387K562DDX3X
chrX4700393647003985-CDS,intron-Distal3.402356.65492K562RPS3
chrX4700201147002045-CDS,intron-Distal,intron-Proximal4.589956.19917K562XRCC6
chrX4700398547004057-CDS,intron-Distal3.919858.04449K562RPS3
chrX4700399147004049-CDS,intron-Distal3.940729.64287HepG2LARP4
chrX4700391747003990-CDS,intron-Distal5.2992912.82347HepG2RPS3
chrX4700196847001990-CDS,intron-Distal,intron-Proximal4.743364.65563K562AQR
chrX4700201247002067-CDS,intron-Distal,intron-Proximal4.7719612.91882HepG2LARP4
chrX4700398147004070-CDS,intron-Distal4.224319.39478HepG2DDX3X
chrX4700399747004062-CDS,intron-Distal4.343634.82934K562RBM15
chrX4700200847002091-CDS,intron-Distal,intron-Proximal4.1942111.61848K562SND1
chrX4700174047001753-CDS,intron-Distal3.115299.59307K562YBX3
chrX4700397347004054-CDS,intron-Distal4.4322611.04345K562GEMIN5
chrX4700401647004066-CDS,intron-Distal3.8251818.02529K562DDX3X
chrX4700391047003973-CDS,intron-Distal3.649685.73494K562GEMIN5
chrX4700395047004068-CDS,intron-Distal3.816047.78965HepG2SUB1
chrX4700181247001840-CDS,intron-Distal4.527936.65725K562XRCC6
chrX4700393247003977-CDS,intron-Distal3.715827.16338HepG2LARP4
chrX4700392947003979-CDS,intron-Distal3.218445.80107K562SND1
chrX4700172147001775-CDS,intron-Distal4.5612314.03906HepG2LARP4
chrX4700399847004055-CDS,intron-Distal3.8378711.34863HepG2RPS3
chrX4700209147002144-CDS,intron-Distal,intron-Proximal3.940974.08796K562SND1
chrX4700399647004074-CDS,intron-Distal4.320363.24327K562EIF3G
chrX4700180947001839-CDS,intron-Distal4.443948.02139HepG2LARP4
chrX4700178547001841-CDS,intron-Distal5.419439.18911K562SND1
chrX4700387347003923-CDS,intron-Distal6.2272019.01241K562RPS3
chrX4700199047002017-CDS,intron-Distal,intron-Proximal3.114673.49168K562AQR
chrX4700389847003973-CDS,intron-Distal3.462443.25727K562METAP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFB11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFB11 is not available on ENCORE database.

  • 72 RBPs can affect the levels of NDUFB11.  








The Knockdown/knockout RNA-Seq assay for NDUFB11 is not available on ENCORE database.





72 RBPs can affect the gene expression of NDUFB11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFB11ENSG00000147123.10370.39710229.227400.692203.773903.08670HepG2BOP1
NDUFB11ENSG00000147123.10387.95290280.734200.466603.018101.95230HepG2YBX3
NDUFB11ENSG00000147123.10472.95120702.16460-0.570103.156702.47910HepG2CELF1
NDUFB11ENSG00000147123.10776.65860641.897900.274802.531701.73120HepG2DDX19B
NDUFB11ENSG00000147123.10380.03990264.678700.521803.042501.62130HepG2DDX52
NDUFB11ENSG00000147123.10922.77140664.015300.474705.691704.78420HepG2DKC1
NDUFB11ENSG00000147123.10424.75770275.668300.623605.275404.33160HepG2DNAJC21
NDUFB11ENSG00000147123.10376.89570273.222000.464003.506802.78740HepG2DNAJC2
NDUFB11ENSG00000147123.10520.98440315.717900.722505.015503.80970HepG2EEF2
NDUFB11ENSG00000147123.10854.15960678.218700.332702.357801.58710HepG2EWSR1
NDUFB11ENSG00000147123.10345.03300229.109500.590603.824702.42800HepG2FAM120A
NDUFB11ENSG00000147123.10483.57780781.69090-0.692907.382106.13540HepG2FUBP3
NDUFB11ENSG00000147123.10341.70240238.522500.518502.301601.71430HepG2GPKOW
NDUFB11ENSG00000147123.10184.38890363.92120-0.980905.081403.15560HepG2HLTF
NDUFB11ENSG00000147123.10410.88210278.309100.561902.235701.65030HepG2HNRNPA1
NDUFB11ENSG00000147123.10495.65170309.563400.679005.063404.14690HepG2HNRNPC
NDUFB11ENSG00000147123.10406.67860307.517100.403102.814002.20200HepG2HNRNPU
NDUFB11ENSG00000147123.10400.70430314.119200.351102.435801.74300HepG2ILF2
NDUFB11ENSG00000147123.10479.33000274.281400.805308.917007.63960HepG2PPIL4
NDUFB11ENSG00000147123.10673.77690908.69080-0.431504.203503.56010HepG2PTBP1
NDUFB11ENSG00000147123.10649.65630984.26660-0.599406.842805.92570HepG2QKI
NDUFB11ENSG00000147123.10490.73920628.75330-0.357502.379101.57790HepG2RBM15
NDUFB11ENSG00000147123.10665.91460893.23530-0.423703.595702.83390HepG2RBM25
NDUFB11ENSG00000147123.10708.14160519.884600.445702.341201.43710HepG2RBM27
NDUFB11ENSG00000147123.10753.140701011.33710-0.425304.091903.45740HepG2NELFE
NDUFB11ENSG00000147123.10536.85770380.181600.497802.478301.71990HepG2RPS3A
NDUFB11ENSG00000147123.10456.96670273.859900.738603.913303.16970HepG2SAFB2
NDUFB11ENSG00000147123.10873.42920685.262500.349902.982102.25630HepG2SLBP
NDUFB11ENSG00000147123.10611.73060987.55710-0.691007.911407.20750HepG2SRSF1
NDUFB11ENSG00000147123.10435.19580803.39120-0.884409.621308.69950HepG2SRSF9
NDUFB11ENSG00000147123.101264.90410962.871700.393505.177704.51930HepG2SSB
NDUFB11ENSG00000147123.10506.36630887.52900-0.809607.652006.79630HepG2TAF15
NDUFB11ENSG00000147123.10566.89020815.65170-0.524905.007703.89250HepG2TIA1
NDUFB11ENSG00000147123.10472.98510298.825300.662402.056501.61220HepG2TIAL1
NDUFB11ENSG00000147123.10466.13930301.480500.628605.030304.31530HepG2TRIM56
NDUFB11ENSG00000147123.10408.06350565.12170-0.469804.450203.60070HepG2UPF1
NDUFB11ENSG00000147123.10480.64480340.528600.497102.430201.41250HepG2XPO5
NDUFB11ENSG00000147123.10209.77490340.69840-0.699703.154101.80070HepG2XRCC5
NDUFB11ENSG00000147123.10759.39190445.909100.768003.639302.81710HepG2XRN2
NDUFB11ENSG00000147123.102416.959201444.660300.7424022.4800020.97220K562AGGF1
NDUFB11ENSG00000147123.102426.424901587.560100.611904.034702.79940K562AKAP8
NDUFB11ENSG00000147123.102630.472701503.258400.807107.139306.04790K562AKAP8L
NDUFB11ENSG00000147123.101994.962801577.324900.338804.482303.29060K562ATP5C1
NDUFB11ENSG00000147123.101182.70790883.936800.420005.372904.01780K562BCLAF1
NDUFB11ENSG00000147123.101448.358501088.215900.412405.430403.84060K562CPEB4
NDUFB11ENSG00000147123.10913.58290670.597800.446003.533002.31810K562CSTF2
NDUFB11ENSG00000147123.10949.98270775.029300.293602.661201.36850K562DDX27
NDUFB11ENSG00000147123.10605.39380482.205800.328102.373201.63370K562EIF3G
NDUFB11ENSG00000147123.101361.14370669.533001.023506.399305.07240K562FIP1L1
NDUFB11ENSG00000147123.101047.925001244.22600-0.247702.107401.56640K562FXR1
NDUFB11ENSG00000147123.10201.16680526.99530-1.389404.232303.31600K562G3BP2
NDUFB11ENSG00000147123.102568.222401842.936000.478703.023702.23540K562GRSF1
NDUFB11ENSG00000147123.10563.08230833.63640-0.566102.967901.34030K562HNRNPAB
NDUFB11ENSG00000147123.101327.87040880.207200.593102.560301.58590K562IGF2BP2
NDUFB11ENSG00000147123.101208.58600894.998100.433302.696701.52460K562IGF2BP3
NDUFB11ENSG00000147123.102034.131301595.249400.350503.799302.81100K562KIF1C
NDUFB11ENSG00000147123.102118.026501527.113900.471806.105104.27040K562MAK16
NDUFB11ENSG00000147123.102104.508901787.093900.235802.212101.41490K562MBNL1
NDUFB11ENSG00000147123.10572.76090855.84600-0.579403.193901.85310K562PABPC1
NDUFB11ENSG00000147123.101922.63650981.614400.969806.170104.51530K562PABPN1
NDUFB11ENSG00000147123.101617.71150760.256901.089304.572903.48150K562PPIG
NDUFB11ENSG00000147123.10498.51720792.46380-0.668704.121301.91460K562PPIL4
NDUFB11ENSG00000147123.101816.640401167.412500.637902.847101.37670K562PPP1R8
NDUFB11ENSG00000147123.101121.80350781.606000.521204.300903.36610K562PRPF8
NDUFB11ENSG00000147123.102607.679301490.649700.8067013.7089012.54650K562PUS1
NDUFB11ENSG00000147123.102265.543301452.554500.6412013.4473012.13500K562RBM15
NDUFB11ENSG00000147123.10626.88740848.32400-0.436403.151501.60420K562SDAD1
NDUFB11ENSG00000147123.101033.214201288.68310-0.318803.366402.47130K562SF3A3
NDUFB11ENSG00000147123.101314.22640880.527700.577705.433504.44910K562SRSF1
NDUFB11ENSG00000147123.10865.85850529.244400.710107.819505.92070K562SRSF4
NDUFB11ENSG00000147123.101199.99660831.792600.528603.575402.35350K562SRSF5
NDUFB11ENSG00000147123.101368.47900890.976900.619004.222603.34230K562TARDBP
NDUFB11ENSG00000147123.101314.93370859.493700.613307.036805.63570K562TIA1
NDUFB11ENSG00000147123.101121.52490843.832300.410302.399201.39630K562TRA2A
NDUFB11ENSG00000147123.102231.811401868.670600.256103.174601.80850K562TROVE2
NDUFB11ENSG00000147123.101019.087601232.15860-0.273903.045302.15820K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFB11 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NDUFB11 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NDUFB11 is not avaliable on ENCORE database.