LRRFIP2

General Information

Gene Name       : LRRFIP2
Gene ID             : ENSG00000093167.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRRFIP2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRRFIP2ENSG00000093167.1727.2327.1827.20ENCSR000AEF
HepG2LRRFIP2ENSG00000093167.1716.3124.7020.50ENCSR985KAT
K562LRRFIP2ENSG00000093167.1727.7628.7228.24ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRRFIP2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRRFIP2 RNA is bound by 22 proteins.  







eCLIP assay for LRRFIP2 is not avaliable on ENCORE database.





22 proteins are bound to LRRFIP2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr33719038437190501-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.666633.14726K562SRSF7
chr33709468437094761-3'-UTR,intron-Distal4.684799.98780K562PUM2
chr33719038137190513-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2511012.72614K562UCHL5
chr33709526937095451-3'-UTR,CDS,intron-Distal3.437443.80299HepG2GRWD1
chr33709533537095452-3'-UTR,CDS,intron-Distal4.361884.29290K562TRA2A
chr33709468037094761-3'-UTR,intron-Distal5.171059.39648K562PABPC4
chr33709501337095075-3'-UTR,intron-Distal4.238304.97297K562TIA1
chr33709533137095431-3'-UTR,CDS,intron-Distal3.872825.35703HepG2BCLAF1
chr33721758537217728-5'-UTR,intron-Distal,intron-Proximal4.9325210.30616HepG2DDX3X
chr33721620737216296-5'-UTR,intron-Distal3.062553.28806K562KHSRP
chr33721772837217808-5'-UTR,intron-Distal,intron-Proximal5.038396.05264HepG2DDX3X
chr33717055137170644-CDS,intron-Distal,intron-Proximal3.169114.26492HepG2BCLAF1
chr33716312837163195-CDS,intron-Distal,intron-Proximal4.056884.36528HepG2U2AF2
chr33710777937107964-CDS,intron-Distal,intron-Proximal3.466746.57527HepG2U2AF2
chr33711649737116604-CDS,intron-Distal,intron-Proximal3.665304.09885HepG2BCLAF1
chr33716299037163038-CDS,intron-Distal,intron-Proximal4.131254.77518HepG2U2AF2
chr33711655937116584-CDS,intron-Distal3.514567.85262K562UCHL5
chr33716296137163036-CDS,intron-Distal,intron-Proximal3.534245.38969K562U2AF2
chr33713810637138143-CDS,intron-Distal,intron-Proximal3.806603.01531K562YBX3
chr33709535837095451-CDS,intron-Distal3.109399.21267K562UCHL5
chr33713812937138258-CDS,intron-Distal,intron-Proximal4.389486.21228K562U2AF2
chr33712512537125266-CDS,intron-Distal,intron-Proximal3.4129110.33341K562UCHL5
chr33713634037136401-CDS,intron-Distal,intron-Proximal3.122194.94039K562YBX3
chr33709593937096006-CDS,intron-Distal3.066075.18085K562LIN28B
chr33712517537125300-CDS,intron-Distal,intron-Proximal3.9375111.99757K562ZNF622
chr33711434837114405-CDS,intron-Distal,intron-Proximal3.380086.57527HepG2U2AF2
chr33713811337138199-CDS,intron-Distal,intron-Proximal5.2733311.52732K562SF3B4
chr33711434537114396-CDS,intron-Distal,intron-Proximal4.112843.31221K562U2AF1
chr33710027837100404-CDS,intron-Distal,intron-Proximal3.0731711.19432K562UCHL5
chr33710523037105284-CDS,intron-Distal,intron-Proximal3.066164.27175K562UCHL5
chr33710737137107434-CDS,intron-Distal,intron-Proximal3.507038.64848K562UCHL5
chr33711655637116604-CDS,intron-Distal3.271414.92880K562ZNF622
chr33711433537114404-CDS,intron-Distal,intron-Proximal3.927468.50678K562U2AF2
chr33711666737116736-intron-Distal,intron-Proximal3.747229.07651K562KHSRP
chr33711864837118800-intron-Distal3.533608.87792K562KHSRP
chr33716334337163369-intron-Distal3.142396.14250K562HNRNPL
chr33711719137117251-intron-Distal4.233595.19823K562KHSRP
chr33716243237162495-intron-Distal3.7772610.27184K562KHSRP
chr33713844437138471-intron-Distal3.066695.17040K562KHSRP
chr33716211437162197-intron-Distal3.4119010.26632K562KHSRP
chr33711851337118648-intron-Distal4.1531614.01968K562KHSRP
chr33715318837153260-intron-Distal4.278876.07385K562GTF2F1
chr33717037637170456-intron-Distal,intron-Proximal3.191837.67081K562KHSRP
chr33715319537153284-intron-Distal4.488445.23978HepG2PRPF4
chr33711661337116667-intron-Distal,intron-Proximal3.290265.34873K562KHSRP
chr33716249537162574-intron-Distal3.5387810.73524K562KHSRP
chr33710532837105449-intron-Distal,intron-Proximal3.396564.72639K562KHSRP
chr33712534537125400-intron-Distal,intron-Proximal4.436225.19823K562KHSRP
chr33718959137189682-intron-Distal3.960486.41553K562KHSRP
chr33714923637149310-intron-Distal3.707307.21887K562KHSRP
chr33719920937199332-intron-Distal4.106593.66668K562KHSRP
chr33711101337111083-intron-Distal4.322585.05197K562HNRNPK
chr33716093437161083-intron-Distal3.832928.67954K562KHSRP
chr33717476137174835-intron-Distal3.374794.30679K562KHSRP
chr33713830637138366-intron-Distal3.053895.34873K562KHSRP
chr33717416637174225-intron-Distal3.696293.24603K562KHSRP
chr33715206037152191-intron-Distal4.104533.48210HepG2HNRNPL
chr33714941237149561-intron-Distal,intron-Proximal4.1677118.38094K562KHSRP
chr33712540037125458-intron-Distal4.680015.85485K562KHSRP
chr33711685237116913-intron-Distal4.880836.73684K562KHSRP
chr33716331037163339-intron-Distal5.204209.08942K562HNRNPL
chr33715453237154625-intron-Distal,intron-Proximal3.440586.18396K562KHSRP
chr33710784837107948-intron-Distal,intron-Proximal3.606124.19039HepG2PTBP1
chr33719896637199078-intron-Distal4.007303.41738HepG2PTBP1
chr33712548537125619-intron-Distal3.7062711.77432K562KHSRP
chr33716331337163402-intron-Distal3.144885.78457HepG2HNRNPL
chr33715289437152951-intron-Distal3.878683.71397K562KHSRP
chr33717485337174923-intron-Distal4.265043.45805K562KHSRP
chr33714931037149412-intron-Distal3.408138.65519K562KHSRP
chr33717038937170534-intron-Distal,intron-Proximal5.152458.34848K562PRPF8
chr33715642237156526-intron-Distal,intron-Proximal3.110495.34873K562KHSRP
chr33713818337138257-intron-Distal,intron-Proximal3.553613.16095HepG2U2AF2
chr33721613437216207-intron-Distal,intron-Proximal4.125204.07352K562KHSRP
chr33715268737152751-intron-Distal3.918507.69621K562KHSRP
chr33712746437127589-intron-Distal3.586204.08064K562KHSRP
chr33715275137152797-intron-Distal4.006313.42844K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRRFIP2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRRFIP2 is not available on ENCORE database.

  • 56 RBPs can affect the levels of LRRFIP2.  








The Knockdown/knockout RNA-Seq assay for LRRFIP2 is not available on ENCORE database.





56 RBPs can affect the gene expression of LRRFIP2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRRFIP2ENSG00000093167.13767.92700559.079900.457805.341604.55140HepG2ACO1
LRRFIP2ENSG00000093167.13430.04950587.26940-0.449502.574001.82550HepG2CIRBP
LRRFIP2ENSG00000093167.13440.00870558.93230-0.345102.792202.12410HepG2CKAP4
LRRFIP2ENSG00000093167.13636.71660487.648700.384701.872301.30280HepG2DDX21
LRRFIP2ENSG00000093167.13431.28110715.67280-0.730704.013703.27170HepG2DDX3X
LRRFIP2ENSG00000093167.13399.94120591.00540-0.563403.437902.78070HepG2EIF2S1
LRRFIP2ENSG00000093167.13635.15170460.245200.464603.529802.32830HepG2EIF3G
LRRFIP2ENSG00000093167.13855.67790635.846700.428302.142201.53420HepG2EIF4B
LRRFIP2ENSG00000093167.131195.28900914.173700.386704.818004.06420HepG2ETF1
LRRFIP2ENSG00000093167.13608.44800747.69110-0.297302.156001.51660HepG2HNRNPF
LRRFIP2ENSG00000093167.13474.92720748.15430-0.655609.548808.36850HepG2HNRNPL
LRRFIP2ENSG00000093167.13820.84410630.040100.381602.907902.08080HepG2MSI2
LRRFIP2ENSG00000093167.13424.87930678.43030-0.675104.729903.91460HepG2NCBP2
LRRFIP2ENSG00000093167.13607.44740814.44880-0.423103.696502.81360HepG2NOL12
LRRFIP2ENSG00000093167.13532.74280400.649000.411002.208601.48460HepG2PRPF8
LRRFIP2ENSG00000093167.13987.42810582.180200.7621011.9682010.98920HepG2PTBP1
LRRFIP2ENSG00000093167.13815.72310569.455300.518406.814205.92130HepG2PUS1
LRRFIP2ENSG00000093167.13957.27490557.190100.780704.606503.70970HepG2RAVER1
LRRFIP2ENSG00000093167.131053.30150826.554300.349602.456401.78920HepG2SF3B1
LRRFIP2ENSG00000093167.13822.32130606.065900.440104.709703.96890HepG2SF3B4
LRRFIP2ENSG00000093167.13537.727101008.82950-0.907702.866101.52900HepG2SNRNP200
LRRFIP2ENSG00000093167.131262.42730863.001600.548709.355808.58430HepG2SRFBP1
LRRFIP2ENSG00000093167.131050.44120632.625600.7315013.2856012.41510HepG2SRSF1
LRRFIP2ENSG00000093167.13583.47660734.55960-0.332202.586101.91110HepG2SRSF7
LRRFIP2ENSG00000093167.13819.85580568.695200.527606.105205.32690HepG2TAF15
LRRFIP2ENSG00000093167.13283.80430813.91420-1.5200025.6229023.85040HepG2TARDBP
LRRFIP2ENSG00000093167.131095.89160665.768800.718908.602307.48940HepG2U2AF1
LRRFIP2ENSG00000093167.13912.50640681.072700.421904.254203.53710HepG2UTP3
LRRFIP2ENSG00000093167.13695.73120528.102500.397603.520502.77690HepG2ZC3H8
LRRFIP2ENSG00000093167.13976.83860775.845700.332303.929703.30870HepG2ZNF622
LRRFIP2ENSG00000093167.132690.494402182.202100.302004.697503.99240K562AGGF1
LRRFIP2ENSG00000093167.132985.403902397.911300.316002.940201.91730K562AKAP8
LRRFIP2ENSG00000093167.132758.776202270.680500.280802.413801.80330K562AKAP8L
LRRFIP2ENSG00000093167.132398.400901749.924900.454704.719403.99020K562AQR
LRRFIP2ENSG00000093167.131648.503301239.781100.411004.618802.64140K562CEBPZ
LRRFIP2ENSG00000093167.131541.418901852.26330-0.265002.858301.73000K562CPEB4
LRRFIP2ENSG00000093167.133572.836602738.376600.383605.462904.08960K562CELF1
LRRFIP2ENSG00000093167.132462.546801916.334300.361705.993205.08620K562DDX47
LRRFIP2ENSG00000093167.13682.65440873.94910-0.356402.263701.43840K562EFTUD2
LRRFIP2ENSG00000093167.13790.68120520.902300.602003.084302.01560K562EIF3A
LRRFIP2ENSG00000093167.132631.671002227.177700.240702.900901.94050K562EIF4G2
LRRFIP2ENSG00000093167.13839.971301181.00200-0.491605.028004.24630K562HNRNPC
LRRFIP2ENSG00000093167.132526.013401909.658900.403403.815402.88490K562HSPD1
LRRFIP2ENSG00000093167.133132.747602409.758600.378404.360103.29420K562KIF1C
LRRFIP2ENSG00000093167.132892.339702306.732700.326303.215702.03190K562MAK16
LRRFIP2ENSG00000093167.131213.128601452.12730-0.259402.756901.94960K562MTPAP
LRRFIP2ENSG00000093167.132571.470501892.181000.442403.063102.12730K562NAA15
LRRFIP2ENSG00000093167.131853.743401613.397500.200202.671401.93640K562NSUN2
LRRFIP2ENSG00000093167.13670.53810850.45220-0.342902.003201.35900K562PRPF8
LRRFIP2ENSG00000093167.13759.346601058.90770-0.479704.040602.91910K562PSIP1
LRRFIP2ENSG00000093167.131719.988901242.762500.468705.811904.87850K562PTBP1
LRRFIP2ENSG00000093167.133105.984102584.623800.265002.789301.71620K562PUM1
LRRFIP2ENSG00000093167.133278.806202251.890300.541906.599005.80220K562PUS1
LRRFIP2ENSG00000093167.132606.252602194.129300.248202.549201.97690K562RBM15
LRRFIP2ENSG00000093167.13601.79120966.19160-0.683008.376406.64320K562RCC2
LRRFIP2ENSG00000093167.131256.52050869.580000.530903.547002.02460K562RRP9
LRRFIP2ENSG00000093167.13758.63790973.62480-0.360002.699101.63240K562SAFB
LRRFIP2ENSG00000093167.13683.22040915.91590-0.422903.258102.12250K562SRFBP1
LRRFIP2ENSG00000093167.131527.407801271.703400.264202.553501.43250K562SRSF7
LRRFIP2ENSG00000093167.13833.519001233.03310-0.564905.656604.62420K562TARDBP
LRRFIP2ENSG00000093167.131544.762201156.362300.417702.958601.82220K562U2AF1
LRRFIP2ENSG00000093167.131898.420401194.402000.6684011.8531010.17280K562U2AF2
LRRFIP2ENSG00000093167.131902.477401522.229300.321605.086903.97030K562WDR43
LRRFIP2ENSG00000093167.132398.475401971.271900.282902.344801.56130K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRRFIP2 is not available on ENCORE database.





34 RBPs can affect the splicing of LRRFIP2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.137000.000310.08443includedK562IGF2BP2
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.241000.000000.00012includedK562FTO
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.312000.000130.09914excludedK562RBFOX2
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.437000.000250.03786excludedHepG2HNRNPM
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.248000.000020.00351excludedK562XRCC6
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.097000.000230.06193includedK562PUM1
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.164000.001090.09874includedK562FMR1
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.248000.000000.00006excludedK562WDR43
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.519000.000000.00000excludedHepG2QKI
SELRRFIP2ENSG00000093167.13chr3-370965763709665637095901370960063710028037100401-0.056000.000080.00158excludedHepG2U2AF2
SELRRFIP2ENSG00000093167.13chr3-371073003710743337105232371052823711651437116607-0.120000.000000.00011excludedK562AQR
SELRRFIP2ENSG00000093167.13chr3-371705533717064037138106371381513719038437190529-0.056000.004300.04107excludedK562AQR
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.283000.000000.00013includedK562ABCF1
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.391000.000000.00000excludedK562FXR1
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.445000.000010.00227excludedHepG2DDX3X
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.148000.000450.07904includedK562HNRNPA1
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.181000.000000.00000excludedK562PUS1
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.646000.000000.00000excludedHepG2NCBP2
SELRRFIP2ENSG00000093167.13chr3-3710771437107816371073003710743337116514371166070.305000.000000.00000includedHepG2PTBP1
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.197000.000430.02669includedHepG2PTBP1
SELRRFIP2ENSG00000093167.13chr3-3719610437196147371903843719052937216029372160960.266000.000050.00634includedHepG2FTO
SELRRFIP2ENSG00000093167.13chr3-3711428037114373371073003710743337116514371166070.053000.000030.01231includedK562APOBEC3C
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.301000.000030.00754excludedK562HNRNPM
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.143000.000520.04004includedK562HNRNPL
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.141000.000020.01440includedK562PPIL4
SELRRFIP2ENSG00000093167.13chr3-3719610437196215371904173719052937216029372160960.169000.000180.00623includedHepG2SRSF1
SELRRFIP2ENSG00000093167.13chr3-3719610437196215371904173719052937216029372160960.151000.003690.08370includedHepG2SF3A3
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.535000.000000.00000excludedHepG2RBFOX2
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.219000.001140.09014includedHepG2SUPV3L1
SELRRFIP2ENSG00000093167.13chr3-3716312537163182371381063713815137170553371706400.254000.000100.02358includedK562RBM22
SELRRFIP2ENSG00000093167.13chr3-371329573713302937125126371252973713628237136399-0.347000.000000.00000excludedK562TARDBP
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.158000.000350.01685includedK562HNRNPU
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.265000.000000.00000includedK562CPSF6
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.247000.000000.00000includedK562SF3B1
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.154000.000040.01031includedK562ZC3H8
SELRRFIP2ENSG00000093167.13chr3-3710771437107816371073003710743337116514371166070.434000.000000.00000includedK562PTBP1
SELRRFIP2ENSG00000093167.13chr3-3713295737133029371251263712529737136282371363990.203000.000020.00061includedK562HNRNPC
A3SSLRRFIP2ENSG00000093167.13chr3-3717055337170689371705533717064037190384371905290.082000.000000.00000longerK562AQR
A3SSLRRFIP2ENSG00000093167.13chr3-3712512637125328371251263712529737136282371363990.172000.000000.00000longerK562AQR
A3SSLRRFIP2ENSG00000093167.13chr3-3709590137096056370959013709600637096576370966890.100000.000000.00000longerK562AQR
A3SSLRRFIP2ENSG00000093167.13chr3-3719038437190565371903843719052937216029372160960.108000.000000.00000longerK562AQR
MXELRRFIP2ENSG00000093167.13chr3-37107300371074333710771437107816371052323710528237114280371143730.123000.001440.044801includedK562PTBP1
MXELRRFIP2ENSG00000093167.13chr3-37107300371074333710771437107816371052323710528237116514371166070.161000.000000.000001includedK562PTBP1
MXELRRFIP2ENSG00000093167.13chr3-3713810637138151371705533717064037136282371363993719038437190529-0.267000.000100.003282includedK562DROSHA
MXELRRFIP2ENSG00000093167.13chr3-3719038437190529372160293721609637138106371381513721755037217828-0.175000.000390.003992includedK562AQR
MXELRRFIP2ENSG00000093167.13chr3-3713810637138151371705533717064037136282371363993719038437190529-0.250000.000020.002292includedK562SBDS
MXELRRFIP2ENSG00000093167.13chr3-37190384371905293721602937216096371705533717064037217550372178280.237000.001990.061691includedHepG2NCBP2
MXELRRFIP2ENSG00000093167.13chr3-3713810637138151371705533717064037136282371363993719038437190529-0.200000.005150.064342includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LRRFIP2 is not avaliable on ENCORE database.