LRRC4B

General Information

Gene Name       : LRRC4B
Gene ID             : ENSG00000131409.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRRC4B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRRC4BENSG00000131409.120.000.000.00ENCSR000AEF
HepG2LRRC4BENSG00000131409.120.000.000.00ENCSR985KAT
K562LRRC4BENSG00000131409.121.960.141.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRRC4B is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRRC4B RNA is bound by 2 proteins.  







eCLIP assay for LRRC4B is not avaliable on ENCORE database.





2 proteins are bound to LRRC4B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195105637451056451-intron-Distal4.270534.04290K562CSTF2T
chr195107061951070746-intron-Distal4.887648.16302K562CSTF2T
chr195105596951056031-intron-Distal5.416277.07160K562EIF4G2
chr195105564051055732-intron-Distal4.045027.67350K562EIF4G2
chr195105549651055554-intron-Distal4.281344.48935K562CSTF2T
chr195105577051055852-intron-Distal5.3235014.83536K562EIF4G2
chr195105638651056465-intron-Distal5.509489.37109K562EIF4G2
chr195106915851069235-intron-Distal3.932093.59342K562CSTF2T
chr195105371851053773-intron-Distal4.007143.37414K562CSTF2T
chr195106740151067475-intron-Distal3.950833.80314K562CSTF2T
chr195105567751055775-intron-Distal4.359773.80512K562CSTF2T
chr195107089051070957-intron-Distal3.335773.73797K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRRC4B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRRC4B is not available on ENCORE database.

  • 78 RBPs can affect the levels of LRRC4B.  








The Knockdown/knockout RNA-Seq assay for LRRC4B is not available on ENCORE database.





78 RBPs can affect the gene expression of LRRC4B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRRC4BENSG00000131409.8244.4877073.720601.7295013.7926011.22430K562ABCF1
LRRC4BENSG00000131409.8135.9991045.814101.569608.916607.97260K562AGGF1
LRRC4BENSG00000131409.8143.2472047.674301.587109.316808.03530K562AKAP8L
LRRC4BENSG00000131409.8185.64430107.326300.790403.860501.51790K562AUH
LRRC4BENSG00000131409.8128.9979018.155702.8288017.0324014.64620K562BCLAF1
LRRC4BENSG00000131409.8105.6405058.647200.848902.366701.56590K562BOP1
LRRC4BENSG00000131409.8150.8979051.356701.554803.890502.14910K562BUD13
LRRC4BENSG00000131409.8137.4380045.917501.581604.622303.18400K562CCAR1
LRRC4BENSG00000131409.8144.5494054.741701.400808.132506.10110K562CCDC124
LRRC4BENSG00000131409.851.7249017.478001.565203.680302.19240K562CIRBP
LRRC4BENSG00000131409.8310.52600107.666701.5280012.997309.91050K562CKAP4
LRRC4BENSG00000131409.8359.02030101.204901.826703.954802.62090K562CPEB4
LRRC4BENSG00000131409.8131.3991062.357701.075202.627201.86170K562CPSF6
LRRC4BENSG00000131409.894.4399013.773802.7774011.996809.61280K562CSTF2
LRRC4BENSG00000131409.8106.4791053.752600.986103.828502.09310K562DDX19B
LRRC4BENSG00000131409.8163.6176094.893700.785802.792901.57530K562DDX21
LRRC4BENSG00000131409.8114.8958048.388301.247505.395503.87370K562DDX3X
LRRC4BENSG00000131409.8191.10040104.678100.868302.964602.29200K562DDX47
LRRC4BENSG00000131409.864.4555010.336902.640407.521204.89380K562DDX51
LRRC4BENSG00000131409.890.2733049.056700.879702.679201.40280K562DDX6
LRRC4BENSG00000131409.891.3116049.374000.886902.613901.31300K562DNAJC21
LRRC4BENSG00000131409.855.015409.887902.476002.658401.40620K562EEF2
LRRC4BENSG00000131409.8122.389309.542403.6809013.1169010.95470K562EFTUD2
LRRC4BENSG00000131409.8109.1102047.750001.192104.744203.83460K562EIF2S2
LRRC4BENSG00000131409.856.4080018.394601.616503.886201.60390K562EIF3H
LRRC4BENSG00000131409.8171.87120101.083700.765702.307701.44520K562EIF4G2
LRRC4BENSG00000131409.8119.2135053.003101.169304.879703.73070K562FIP1L1
LRRC4BENSG00000131409.8131.4076063.449501.050303.963902.93670K562FMR1
LRRC4BENSG00000131409.8100.5179053.780100.902202.707201.80270K562FTO
LRRC4BENSG00000131409.867.504709.568902.818508.098205.66920K562GEMIN5
LRRC4BENSG00000131409.8178.15440105.886800.750503.571202.27860K562GLRX3
LRRC4BENSG00000131409.8182.2453059.535401.6140010.081608.55180K562GPKOW
LRRC4BENSG00000131409.8141.3665063.615301.151902.027401.37450K562GRSF1
LRRC4BENSG00000131409.8120.7046049.834401.276204.438801.90270K562HLTF
LRRC4BENSG00000131409.8118.5558029.970701.983805.501903.81880K562HNRNPF
LRRC4BENSG00000131409.8107.3162016.273902.721107.201805.24190K562IGF2BP2
LRRC4BENSG00000131409.839.4859017.137701.204102.255701.49290K562MAGOH
LRRC4BENSG00000131409.861.9413017.108201.856103.691102.61290K562MATR3
LRRC4BENSG00000131409.8163.9137056.669301.532206.346404.86180K562MBNL1
LRRC4BENSG00000131409.8199.2217058.113601.7773012.6084010.67170K562METAP2
LRRC4BENSG00000131409.861.892809.448902.711504.827702.98270K562NONO
LRRC4BENSG00000131409.893.4331015.254602.6146011.468609.39290K562PCBP2
LRRC4BENSG00000131409.867.69570122.54900-0.856202.698401.87760K562PCBP3
LRRC4BENSG00000131409.8136.4844060.605801.171105.342803.05250K562PKM
LRRC4BENSG00000131409.8196.3320060.177001.7059012.7423010.57800K562PPIG
LRRC4BENSG00000131409.879.007809.286303.088709.851408.42990K562PRPF8
LRRC4BENSG00000131409.884.1253030.061601.484504.037402.91690K562PSIP1
LRRC4BENSG00000131409.8234.19190114.926201.026905.629904.24310K562PUM2
LRRC4BENSG00000131409.8106.3541048.996201.118003.537601.35020K562RBFOX2
LRRC4BENSG00000131409.8106.8565015.982102.7410013.1942011.16260K562RBM22
LRRC4BENSG00000131409.864.1859015.565102.043806.410504.10940K562RBM34
LRRC4BENSG00000131409.8103.0000044.314101.216702.955501.35270K562RBM39
LRRC4BENSG00000131409.886.384409.445403.1930011.081009.41600K562RPS19
LRRC4BENSG00000131409.871.5385023.103301.630503.682802.50670K562RPS3
LRRC4BENSG00000131409.837.8347083.76590-1.146703.269202.09140K562SAFB
LRRC4BENSG00000131409.882.4910032.942501.324202.659201.49050K562SF1
LRRC4BENSG00000131409.8273.26890122.066101.1626010.191408.69880K562SF3A3
LRRC4BENSG00000131409.8178.1119056.623401.653209.188807.33840K562SF3B1
LRRC4BENSG00000131409.816.809901.868603.169203.410602.45750K562SF3B4
LRRC4BENSG00000131409.8120.6773046.210601.384805.047502.64590K562SMN1
LRRC4BENSG00000131409.847.581809.291302.356405.043002.77030K562SRP68
LRRC4BENSG00000131409.8382.79750125.061701.6138016.6710014.65150K562SRPK2
LRRC4BENSG00000131409.859.3181016.316501.862004.475103.57990K562SRSF1
LRRC4BENSG00000131409.861.1567022.291901.455903.122701.98770K562SRSF4
LRRC4BENSG00000131409.8184.9643096.213600.942804.151602.33360K562SUCLG1
LRRC4BENSG00000131409.827.0210094.28540-1.803007.684506.30620K562SYNCRIP
LRRC4BENSG00000131409.866.7424016.521702.014106.561705.43060K562TARDBP
LRRC4BENSG00000131409.840.820208.188502.317504.480102.36740K562TFIP11
LRRC4BENSG00000131409.858.6659015.934901.880205.215804.04240K562TIA1
LRRC4BENSG00000131409.845.2174015.617101.533602.975701.83410K562TRA2A
LRRC4BENSG00000131409.8138.0516061.972201.155405.170303.13630K562TRIP6
LRRC4BENSG00000131409.8271.70260111.545301.2843010.075107.63350K562TROVE2
LRRC4BENSG00000131409.8142.435809.502303.9058013.1265010.85090K562UCHL5
LRRC4BENSG00000131409.8246.0704088.174501.4805011.078808.87910K562UTP3
LRRC4BENSG00000131409.873.56850116.70210-0.665702.297501.52000K562WDR43
LRRC4BENSG00000131409.8332.76040107.377601.6317018.0956015.30890K562WRN
LRRC4BENSG00000131409.870.726009.695502.866806.648704.52150K562XRN2
LRRC4BENSG00000131409.8228.95030102.069701.165408.383906.75720K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRRC4B is not available on ENCORE database.






No RBPs affect the alternative splcing events of LRRC4B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LRRC4B is not avaliable on ENCORE database.