LRP12

General Information

Gene Name       : LRP12
Gene ID             : ENSG00000147650.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LRP12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LRP12ENSG00000147650.119.127.368.24ENCSR000AEF
HepG2LRP12ENSG00000147650.110.831.191.01ENCSR985KAT
K562LRP12ENSG00000147650.118.237.127.68ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LRP12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LRP12 RNA is bound by 10 proteins.  







eCLIP assay for LRP12 is not avaliable on ENCORE database.





10 proteins are bound to LRP12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8105501526105501699-3'-UTR,intron-Distal3.2163610.88230K562KHSRP
chr8105502590105502655-3'-UTR,intron-Distal4.315049.44605K562IGF2BP1
chr8105509270105509389-CDS,intron-Distal3.488385.89284K562RBM15
chr8105509458105509513-CDS,intron-Distal4.221074.48994K562RBM15
chr8105507392105507487-CDS,intron-Distal,intron-Proximal3.950198.08874K562SF3B4
chr8105544049105544176-CDS,intron-Distal,intron-Proximal3.627955.35459K562KHSRP
chr8105589375105589402-intron-Distal3.325733.14999K562EXOSC5
chr8105587511105587573-intron-Distal5.4535411.58767K562HNRNPM
chr8105591289105591328-intron-Distal3.430035.85269K562EXOSC5
chr8105529452105529503-intron-Distal3.168894.76345K562KHSRP
chr8105592311105592365-intron-Distal3.360933.14999K562EXOSC5
chr8105591994105592038-intron-Distal4.258273.89080K562EXOSC5
chr8105591428105591461-intron-Distal4.546025.44433K562EXOSC5
chr8105568794105568873-intron-Distal6.0540416.65497K562EXOSC5
chr8105587470105587511-intron-Distal4.957137.90619K562HNRNPM
chr8105587417105587470-intron-Distal5.053457.90619K562HNRNPM
chr8105589626105589666-intron-Distal3.951507.26439K562EXOSC5
chr8105556125105556248-intron-Distal5.048587.90406K562QKI
chr8105591173105591200-intron-Distal4.546025.44433K562EXOSC5
chr8105569704105569762-intron-Distal6.4763222.01998K562EXOSC5
chr8105598789105598965-intron-Distal3.750133.51116K562LSM11
chr8105590409105590466-intron-Distal5.094436.61547K562HNRNPM
chr8105590474105590502-intron-Distal4.428794.80399K562EXOSC5
chr8105567715105567762-intron-Distal5.5619811.33292K562EXOSC5
chr8105589993105590042-intron-Distal5.403228.69609K562EXOSC5
chr8105568332105568357-intron-Distal4.346054.48560K562EXOSC5
chr8105529353105529452-intron-Distal5.109577.83372K562KHSRP
chr8105591618105591655-intron-Distal3.860935.20902K562EXOSC5
chr8105599668105599730-intron-Distal5.040307.71416K562EXOSC5
chr8105585729105585808-intron-Distal5.138875.97591K562QKI
chr8105587173105587251-intron-Distal4.497565.76788K562MATR3
chr8105589508105589574-intron-Distal5.097307.06134K562EXOSC5
chr8105587147105587235-intron-Distal3.179535.00425K562PTBP1
chr8105580065105580140-intron-Distal3.389794.02241K562EXOSC5
chr8105587718105587761-intron-Distal4.189963.53404K562HNRNPM
chr8105568125105568156-intron-Distal4.933247.38693K562EXOSC5
chr8105569566105569606-intron-Distal5.380899.35180K562EXOSC5
chr8105588800105588890-intron-Distal5.4442510.01029K562EXOSC5
chr8105590695105590726-intron-Distal5.5267811.33292K562EXOSC5
chr8105587777105587838-intron-Distal4.860936.08953K562EXOSC5
chr8105591100105591122-intron-Distal3.779185.20960K562EXOSC5
chr8105565850105565903-intron-Distal3.118213.15041K562EXOSC5
chr8105590791105590836-intron-Distal5.190088.69493K562EXOSC5
chr8105599475105599557-intron-Distal3.159367.08090K562HNRNPM
chr8105582146105582232-intron-Distal3.222716.60316K562KHSRP
chr8105589067105589129-intron-Distal5.5666010.34009K562EXOSC5
chr8105588784105588834-intron-Distal3.978757.28460K562HNRNPM
chr8105568975105569035-intron-Distal4.5937616.05677K562EXOSC5
chr8105587596105587676-intron-Distal4.852937.02715K562MATR3
chr8105591529105591567-intron-Distal5.100835.76606K562EXOSC5
chr8105568970105569021-intron-Distal3.481523.83677K562HNRNPM
chr8105569069105569116-intron-Distal5.214549.02315K562EXOSC5
chr8105588804105588908-intron-Distal4.039456.46365K562MATR3
chr8105570392105570440-intron-Distal3.533254.46810K562EXOSC5
chr8105587573105587659-intron-Distal4.5437911.36991K562HNRNPM
chr8105588834105588931-intron-Distal5.4304010.53056K562HNRNPM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LRP12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LRP12 is not available on ENCORE database.

  • 84 RBPs can affect the levels of LRP12.  








The Knockdown/knockout RNA-Seq assay for LRP12 is not available on ENCORE database.





84 RBPs can affect the gene expression of LRP12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LRP12ENSG00000147650.7360.0047069.684302.3690023.7405022.35360HepG2AKAP1
LRP12ENSG00000147650.7139.2247062.998101.143903.180602.35890HepG2CALR
LRP12ENSG00000147650.718.8143054.78140-1.541903.320102.47790HepG2CIRBP
LRP12ENSG00000147650.728.7298076.35080-1.410103.222801.84100HepG2DDX27
LRP12ENSG00000147650.7190.6160066.760601.513508.790207.72850HepG2DDX3X
LRP12ENSG00000147650.725.7452055.13130-1.098602.131401.60330HepG2EIF2S1
LRP12ENSG00000147650.737.3853094.37900-1.336004.487403.46580HepG2EIF4G2
LRP12ENSG00000147650.756.20690129.98690-1.209505.311104.52610HepG2ETF1
LRP12ENSG00000147650.7152.8706055.809701.453605.399004.35430HepG2FIP1L1
LRP12ENSG00000147650.782.0669043.935500.901302.287701.48040HepG2GEMIN5
LRP12ENSG00000147650.722.64640104.03550-2.199702.620101.99420HepG2GPKOW
LRP12ENSG00000147650.754.92810120.21180-1.130002.439101.76310HepG2HNRNPF
LRP12ENSG00000147650.792.2343029.303401.654105.534603.81040HepG2HSPD1
LRP12ENSG00000147650.739.63370118.37870-1.578604.086403.22120HepG2IGF2BP1
LRP12ENSG00000147650.7125.3709054.378201.205002.588201.63850HepG2IGF2BP3
LRP12ENSG00000147650.7118.1325063.283500.900402.793202.15750HepG2NCBP2
LRP12ENSG00000147650.7125.0657071.237800.811903.088002.19670HepG2PARN
LRP12ENSG00000147650.7116.5482050.546301.205104.981804.20420HepG2PCBP1
LRP12ENSG00000147650.767.2493028.455801.240703.211401.31710HepG2PPIG
LRP12ENSG00000147650.7112.7787062.963100.840802.561601.78360HepG2PRPF8
LRP12ENSG00000147650.7111.7029051.418801.119204.133303.49510HepG2PTBP1
LRP12ENSG00000147650.7163.85840100.269800.708503.006402.30690HepG2PUM2
LRP12ENSG00000147650.7132.6836062.855001.077803.197702.44350HepG2RAVER1
LRP12ENSG00000147650.7232.78820108.645601.099307.555206.79760HepG2RBM22
LRP12ENSG00000147650.7142.9515079.614800.844303.085002.03660HepG2RBM27
LRP12ENSG00000147650.7106.2410057.235800.892302.498601.98010HepG2NELFE
LRP12ENSG00000147650.767.11020129.43250-0.947602.067101.46670HepG2RPLP0
LRP12ENSG00000147650.789.3722048.013100.896302.427801.84760HepG2RPS19
LRP12ENSG00000147650.7111.1537062.285900.835502.407301.66890HepG2RRP9
LRP12ENSG00000147650.7124.7740055.893401.158504.385203.82300HepG2SRSF1
LRP12ENSG00000147650.7174.8123093.334700.905205.025104.22110HepG2SRSF5
LRP12ENSG00000147650.759.60070118.08910-0.986502.118801.50050HepG2SRSF7
LRP12ENSG00000147650.780.5268045.463500.824702.156701.65700HepG2SRSF9
LRP12ENSG00000147650.768.4277029.557301.211002.850101.50080HepG2SUGP2
LRP12ENSG00000147650.733.6606069.94260-1.055102.875402.36760HepG2TIAL1
LRP12ENSG00000147650.726.5234070.55110-1.411404.477003.79440HepG2TRIM56
LRP12ENSG00000147650.715.8152047.98800-1.601403.392102.55590HepG2UCHL5
LRP12ENSG00000147650.786.8931047.571200.869102.462101.89000HepG2UTP3
LRP12ENSG00000147650.723.4184079.95850-1.771605.058604.08620HepG2XRN2
LRP12ENSG00000147650.7789.25900315.524601.3226021.9024018.77970K562AARS
LRP12ENSG00000147650.7799.30190575.666700.473403.594002.17890K562ABCF1
LRP12ENSG00000147650.71148.66880926.087300.310603.252902.64720K562AGGF1
LRP12ENSG00000147650.71445.95200963.638500.585405.419104.48730K562AKAP8L
LRP12ENSG00000147650.7523.877501015.52310-0.9549011.7214010.63630K562AQR
LRP12ENSG00000147650.7511.02250389.249200.392602.597101.33480K562BCCIP
LRP12ENSG00000147650.71371.295601106.716400.309202.884601.67790K562CCDC124
LRP12ENSG00000147650.7881.87110633.970100.476105.492703.89350K562CPEB4
LRP12ENSG00000147650.71191.98870649.334500.876204.933702.43580K562DAZAP1
LRP12ENSG00000147650.71198.23560623.573900.9422015.5361012.96540K562DDX3X
LRP12ENSG00000147650.71156.79670655.874400.8185016.9388015.44620K562DDX47
LRP12ENSG00000147650.7449.09650336.968300.414302.242601.42110K562EFTUD2
LRP12ENSG00000147650.7404.00170651.52530-0.689503.910202.93770K562EIF4A3
LRP12ENSG00000147650.7606.45010450.898600.427502.631601.79820K562FMR1
LRP12ENSG00000147650.71075.30580580.811700.888503.166901.72210K562FUS
LRP12ENSG00000147650.7429.64280677.56650-0.657203.624402.94660K562FXR1
LRP12ENSG00000147650.7281.61100423.11830-0.587402.198901.48940K562GPKOW
LRP12ENSG00000147650.7409.74340668.77500-0.706806.914905.71230K562GRSF1
LRP12ENSG00000147650.71600.367501086.766400.558304.766903.10700K562HNRNPK
LRP12ENSG00000147650.7201.06750340.44420-0.759704.382303.19230K562HNRNPM
LRP12ENSG00000147650.7564.72870361.278000.644303.850802.73580K562KRR1
LRP12ENSG00000147650.7550.15560334.328500.718506.337704.11780K562LARP7
LRP12ENSG00000147650.7670.123201143.38770-0.770806.444305.13400K562MAGOH
LRP12ENSG00000147650.71243.39820967.773900.361402.445401.38630K562MSI2
LRP12ENSG00000147650.7351.20290471.34430-0.424503.139502.27900K562MTPAP
LRP12ENSG00000147650.71579.42180803.004300.975806.138304.62830K562NAA15
LRP12ENSG00000147650.7977.39590650.526400.587204.405902.83820K562NCBP2
LRP12ENSG00000147650.7387.29700523.66970-0.435203.718902.86850K562NSUN2
LRP12ENSG00000147650.71631.777501117.363900.546203.399201.89870K562PCBP1
LRP12ENSG00000147650.7276.01930469.72660-0.767104.290703.25380K562PCBP3
LRP12ENSG00000147650.7216.73750360.32200-0.733302.938202.11150K562POLR2G
LRP12ENSG00000147650.7402.059101110.82620-1.4662016.0307014.49980K562PTBP1
LRP12ENSG00000147650.7786.55510990.63780-0.332802.558201.77410K562PUF60
LRP12ENSG00000147650.7761.626201032.40900-0.438905.127603.80390K562PUM2
LRP12ENSG00000147650.71550.88870676.503501.1968011.694508.83280K562RAVER1
LRP12ENSG00000147650.71574.396001038.389100.600406.474104.15800K562RBM34
LRP12ENSG00000147650.7416.30020282.424300.559703.689502.54570K562RCC2
LRP12ENSG00000147650.71727.271601121.178500.623405.504103.88690K562NELFE
LRP12ENSG00000147650.7204.61920320.97510-0.649503.807902.52790K562SAFB
LRP12ENSG00000147650.7491.07610280.607500.807304.981102.88880K562SERBP1
LRP12ENSG00000147650.7794.66920516.782200.620704.987303.92000K562SF3A3
LRP12ENSG00000147650.7600.44460402.383500.577402.752301.78080K562SF3B1
LRP12ENSG00000147650.7406.56860806.33470-0.987905.145803.14030K562SFPQ
LRP12ENSG00000147650.71089.53340612.415600.831005.082202.67490K562SMN1
LRP12ENSG00000147650.71482.77210759.748900.964605.022803.21070K562SNRNP200
LRP12ENSG00000147650.71000.04130529.459300.9174020.7385018.55180K562SRPK2
LRP12ENSG00000147650.7607.228101088.91000-0.842607.650006.48150K562SRSF1
LRP12ENSG00000147650.7305.55040516.32800-0.756906.046904.38230K562SRSF4
LRP12ENSG00000147650.7778.72850542.973500.520104.122302.42860K562SSRP1
LRP12ENSG00000147650.7547.33150317.509300.785506.202604.63840K562SUPV3L1
LRP12ENSG00000147650.71055.87780738.669100.515303.054601.37760K562TBRG4
LRP12ENSG00000147650.7162.08110297.73360-0.877305.275903.94350K562TIAL1
LRP12ENSG00000147650.7191.33870316.30510-0.725204.462303.19700K562TRIM56
LRP12ENSG00000147650.7643.29970504.219800.351302.866901.57310K562TROVE2
LRP12ENSG00000147650.71449.77670686.763401.0778014.7790012.03950K562U2AF1
LRP12ENSG00000147650.71019.75360709.489600.523305.891104.72060K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LRP12 is not available on ENCORE database.





8 RBPs can affect the splicing of LRP12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.166000.000420.01582excludedK562AKAP8L
SELRP12ENSG00000147650.7chr8-1055441341055441911055211661055213021056010461056012340.290000.000400.06120includedK562DROSHA
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.225000.000000.00009excludedK562PUS1
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.217000.000010.00061excludedK562UTP18
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.261000.000000.00000excludedK562RBM15
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.170000.000990.02754excludedK562AGGF1
SELRP12ENSG00000147650.7chr8-105544134105544191105521166105521302105601046105601234-0.278000.000370.02131excludedK562HNRNPK
A3SSLRP12ENSG00000147650.7chr8-1055036451055037871055036451055037671055073041055074370.066000.006700.03736longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LRP12 is not avaliable on ENCORE database.