LLGL1

General Information

Gene Name       : LLGL1
Gene ID             : ENSG00000131899.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LLGL1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LLGL1ENSG00000131899.100.441.360.90ENCSR000AEF
HepG2LLGL1ENSG00000131899.1019.214.7611.98ENCSR985KAT
K562LLGL1ENSG00000131899.106.082.514.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LLGL1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LLGL1 RNA is bound by 14 proteins.  







eCLIP assay for LLGL1 is not avaliable on ENCORE database.





14 proteins are bound to LLGL1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr171814791318148006+3'-UTR4.4046610.56484HepG2UPF1
chr171814730918147404+3'-UTR3.783387.81366HepG2UPF1
chr171814805618148108+3'-UTR6.2598317.70869K562UPF1
chr171814795518148011+3'-UTR5.759345.71015K562PABPC4
chr171814810818148160+3'-UTR5.9830014.48846K562UPF1
chr171814608018146134+3'-UTR,CDS3.147444.42661HepG2PPIG
chr171814757118147609+3'-UTR3.360403.66308K562UPF1
chr171814797018148003+3'-UTR3.252893.37083K562UPF1
chr171814795018148012+3'-UTR5.075186.37383K562DDX6
chr171814806418148145+3'-UTR3.610064.90523HepG2AKAP1
chr171814791318147970+3'-UTR3.228886.06342K562UPF1
chr171814743718147490+3'-UTR3.249263.73678HepG2UPF1
chr171814793018148002+3'-UTR4.527875.58306HepG2AKAP1
chr171814756618147628+3'-UTR4.754645.93974HepG2UPF1
chr171814791718147972+3'-UTR3.554293.80864K562FAM120A
chr171814806018148119+3'-UTR4.529315.93974HepG2UPF1
chr171814613418146180+3'-UTR,intron-Proximal4.641265.35117HepG2PRPF8
chr171812893318128997+5'-UTR5.482716.02643HepG2DDX3X
chr171813718218137253+CDS,intron-Proximal3.200546.27819HepG2PPIG
chr171814415018144237+CDS,intron-Proximal4.025608.38953HepG2PRPF8
chr171813704018137171+CDS,intron-Proximal4.916115.69951K562AQR
chr171814606118146132+CDS3.846563.31827HepG2GRWD1
chr171814587618145926+CDS4.297643.49905HepG2PPIG
chr171813611218136211+CDS,intron-Proximal3.884328.17589HepG2PRPF8
chr171813745218137487+CDS4.217413.49905HepG2PPIG
chr171814189218141911+CDS3.575633.02850K562YBX3
chr171813768518137764+CDS,intron-Proximal4.183717.38067HepG2PRPF8
chr171813611618136226+intron-Distal,intron-Proximal5.066316.75320K562AQR
chr171814030918140408+intron-Distal,intron-Proximal4.205393.91585HepG2PRPF4
chr171814426818144398+intron-Distal,intron-Proximal3.789803.17235HepG2HNRNPK
chr171814196918142047+intron-Distal,intron-Proximal3.923373.25631HepG2PRPF4
chr171813888818138933+intron-Proximal5.767569.61799HepG2EFTUD2
chr171814467918144758+intron-Proximal3.753703.39593HepG2PRPF4
chr171814470618144758+intron-Proximal3.869638.45500HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LLGL1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LLGL1 is not available on ENCORE database.

  • 74 RBPs can affect the levels of LLGL1.  








The Knockdown/knockout RNA-Seq assay for LLGL1 is not available on ENCORE database.





74 RBPs can affect the gene expression of LLGL1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LLGL1ENSG00000131899.6993.38850843.693800.235502.093801.55010HepG2ACO1
LLGL1ENSG00000131899.6505.34770361.606400.482802.237501.34050HepG2ADAR
LLGL1ENSG00000131899.61168.28250857.663500.445802.641301.69240HepG2CCAR1
LLGL1ENSG00000131899.6434.53440304.344200.513702.072601.41490HepG2CNOT7
LLGL1ENSG00000131899.6612.00750417.205600.552704.350803.51970HepG2DDX21
LLGL1ENSG00000131899.6845.70450533.293500.665102.455301.72280HepG2DDX55
LLGL1ENSG00000131899.6556.31030364.101400.611405.336204.38690HepG2DNAJC21
LLGL1ENSG00000131899.6548.27230360.929100.603107.169806.18960HepG2DNAJC2
LLGL1ENSG00000131899.6562.58630824.50200-0.551403.939602.94370HepG2EWSR1
LLGL1ENSG00000131899.6353.23600633.59310-0.842909.374207.97350HepG2FUBP3
LLGL1ENSG00000131899.61253.54910765.515900.711403.860603.05270HepG2FXR1
LLGL1ENSG00000131899.6642.65010401.812500.677403.693202.64400HepG2GEMIN5
LLGL1ENSG00000131899.6778.95690528.743700.558902.127201.56140HepG2GPKOW
LLGL1ENSG00000131899.6383.10280504.59540-0.397401.825101.30330HepG2HNRNPLL
LLGL1ENSG00000131899.6684.01360406.185800.751807.256506.31130HepG2HNRNPU
LLGL1ENSG00000131899.6478.62080290.355400.721003.460102.09790HepG2KHDRBS1
LLGL1ENSG00000131899.61214.07850769.960000.656903.308002.62400HepG2MATR3
LLGL1ENSG00000131899.6486.77360630.67520-0.373602.514601.35820HepG2NAA15
LLGL1ENSG00000131899.6510.20740267.115200.933505.904503.83840HepG2NOLC1
LLGL1ENSG00000131899.6941.47110490.018400.942004.363902.97080HepG2NONO
LLGL1ENSG00000131899.6660.61720362.282800.866609.731908.39350HepG2PPIL4
LLGL1ENSG00000131899.61093.54410640.035200.7727011.013609.93090HepG2PUF60
LLGL1ENSG00000131899.6812.80080679.461000.258402.630702.04920HepG2PUM1
LLGL1ENSG00000131899.6927.51530678.942700.450002.660102.00250HepG2PUM2
LLGL1ENSG00000131899.6160.52840410.62050-1.355003.583502.78340HepG2RAVER1
LLGL1ENSG00000131899.6864.244201126.28250-0.382103.970703.37890HepG2RBM22
LLGL1ENSG00000131899.6837.74850563.641800.571602.565101.61260HepG2RBM27
LLGL1ENSG00000131899.61091.94590891.872900.291902.745302.20530HepG2NELFE
LLGL1ENSG00000131899.61040.46480830.708200.324703.323602.65600HepG2RECQL
LLGL1ENSG00000131899.6657.56320439.252300.582002.335301.76520HepG2RPS19
LLGL1ENSG00000131899.6533.82200305.951700.803004.831003.77340HepG2RPS3A
LLGL1ENSG00000131899.6488.16290361.718100.432403.519102.80850HepG2SAFB2
LLGL1ENSG00000131899.6756.02170613.766700.300602.949602.22720HepG2SLBP
LLGL1ENSG00000131899.6616.14330421.810300.546606.511305.59070HepG2SMN1
LLGL1ENSG00000131899.6610.525401272.06230-1.0590030.7177029.51700HepG2SRFBP1
LLGL1ENSG00000131899.6660.79690870.87310-0.398303.859103.32370HepG2SRSF1
LLGL1ENSG00000131899.61013.27320631.983900.6810012.1163010.93310HepG2SRSF5
LLGL1ENSG00000131899.6454.94550708.52250-0.639108.487907.61500HepG2SRSF9
LLGL1ENSG00000131899.6388.36500266.262100.544502.374301.36600HepG2STIP1
LLGL1ENSG00000131899.61183.73010718.703500.7198016.0010014.70400HepG2SUCLG1
LLGL1ENSG00000131899.6439.06030626.59510-0.513104.272403.11580HepG2SUPT6H
LLGL1ENSG00000131899.6380.38790782.84180-1.0412017.6908016.44860HepG2TAF15
LLGL1ENSG00000131899.6515.42370719.25380-0.480702.756701.92190HepG2TIA1
LLGL1ENSG00000131899.6659.85410394.632100.741508.620207.82660HepG2TIAL1
LLGL1ENSG00000131899.6564.55910398.217100.503504.900904.19380HepG2TRIM56
LLGL1ENSG00000131899.61111.20130625.345100.8293013.0602010.96680HepG2TUFM
LLGL1ENSG00000131899.6951.38990661.955900.523203.914802.91030HepG2UBE2L3
LLGL1ENSG00000131899.6445.84090598.41640-0.424603.903203.12900HepG2ZC3H8
LLGL1ENSG00000131899.61043.34870612.802900.767607.719306.83870K562AGGF1
LLGL1ENSG00000131899.6899.69960673.390200.417903.455002.32820K562AKAP8
LLGL1ENSG00000131899.6901.83790637.652300.500002.750402.09890K562AKAP8L
LLGL1ENSG00000131899.6455.93350598.15610-0.391701.998901.48480K562AQR
LLGL1ENSG00000131899.6384.88890269.715000.512903.235801.79350K562BCCIP
LLGL1ENSG00000131899.6434.41290260.652200.736806.879405.33580K562BCLAF1
LLGL1ENSG00000131899.6346.86270197.743500.810606.153804.49310K562CSTF2
LLGL1ENSG00000131899.6697.40590899.99720-0.367902.213101.34140K562CELF1
LLGL1ENSG00000131899.6617.26140437.421900.496804.417702.86200K562DDX21
LLGL1ENSG00000131899.6315.12130228.528100.463402.790401.46200K562DDX27
LLGL1ENSG00000131899.6424.05320239.588600.823602.379701.53460K562EFTUD2
LLGL1ENSG00000131899.6507.50020336.495900.592704.909203.17370K562EXOSC5
LLGL1ENSG00000131899.6310.86780443.10430-0.511303.828403.13420K562FXR1
LLGL1ENSG00000131899.632.22600117.60970-1.867708.596507.20580K562G3BP2
LLGL1ENSG00000131899.6875.72800616.211800.507005.695904.40180K562HNRNPU
LLGL1ENSG00000131899.6449.22430222.401301.014207.425505.42670K562IGF2BP2
LLGL1ENSG00000131899.6317.11510226.257700.486902.699201.52670K562IGF2BP3
LLGL1ENSG00000131899.6368.14320233.847600.654604.680903.58060K562MAGOH
LLGL1ENSG00000131899.6327.56740233.390300.488902.850201.91310K562MATR3
LLGL1ENSG00000131899.6646.83090527.048800.295402.411001.70970K562NSUN2
LLGL1ENSG00000131899.6655.63130420.639100.640202.469501.54780K562PABPN1
LLGL1ENSG00000131899.6296.49570208.087000.510702.566701.62560K562PCBP2
LLGL1ENSG00000131899.6530.76760798.27800-0.588802.807601.98560K562PUF60
LLGL1ENSG00000131899.6609.90950849.40770-0.477902.861401.77470K562PUM1
LLGL1ENSG00000131899.6819.77150616.152000.411803.817103.13690K562RBM15
LLGL1ENSG00000131899.6346.31750212.372400.705404.400502.51040K562RBM34
LLGL1ENSG00000131899.6188.58770122.212600.625702.884702.01040K562SF3B4
LLGL1ENSG00000131899.6758.47870469.033800.693302.667201.39650K562SFPQ
LLGL1ENSG00000131899.6360.61240234.932100.618102.852901.80880K562SRFBP1
LLGL1ENSG00000131899.6381.40410222.708500.776103.146002.39600K562SRSF1
LLGL1ENSG00000131899.6389.10620237.223000.713804.781303.33630K562SRSF4
LLGL1ENSG00000131899.6354.18990210.300100.752005.431503.87200K562SRSF5
LLGL1ENSG00000131899.6345.95440225.422800.617803.752402.92360K562TARDBP
LLGL1ENSG00000131899.6407.37060217.438500.905608.316406.78680K562TIA1
LLGL1ENSG00000131899.6396.66090261.031200.603603.006202.02800K562TIAL1
LLGL1ENSG00000131899.6423.83280213.307400.990509.065006.75360K562TRA2A
LLGL1ENSG00000131899.672.81160117.67510-0.692602.330501.59500K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LLGL1 is not available on ENCORE database.





14 RBPs can affect the splicing of LLGL1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELLGL1ENSG00000131899.6chr17+181460561814613618145821181459421814722118148189-0.397000.002170.03891excludedK562SF3B4
SELLGL1ENSG00000131899.6chr17+181407941814108718140148181402531814138018141528-0.247000.000120.01176excludedHepG2RBM22
SELLGL1ENSG00000131899.6chr17+181460561814613618145761181459421814722118148189-0.207000.000260.00654excludedHepG2U2AF1
SELLGL1ENSG00000131899.6chr17+1814476418145029181438911814418718145198181453130.154000.000120.01485includedHepG2TBRG4
SELLGL1ENSG00000131899.6chr17+181460561814613618145761181459421814722118148189-0.130000.000030.00060excludedHepG2U2AF2
SELLGL1ENSG00000131899.6chr17+181460561814613618145761181459421814722118148189-0.106000.007280.06317excludedK562AQR
SELLGL1ENSG00000131899.6chr17+181460561814613618145761181459421814722118148189-0.094000.000900.04263excludedHepG2SF3B4
A5SSLLGL1ENSG00000131899.6chr17+181401481814108718140148181402531814138018141528-0.304000.000820.06512shorterHepG2RBM22
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.771000.000000.00000includedHepG2U2AF2
RILLGL1ENSG00000131899.6chr17+1813878318140074181387831813885118139920181400740.276000.000980.03690includedK562HNRNPUL1
RILLGL1ENSG00000131899.6chr17+1814389118145313181438911814418718145198181453130.526000.004900.05010includedHepG2QKI
RILLGL1ENSG00000131899.6chr17+1814389118145313181438911814418718145198181453130.472000.007880.06427includedHepG2TAF15
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.211000.000420.00568includedHepG2U2AF1
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.144000.002340.04489includedHepG2KHSRP
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.116000.009380.08167includedHepG2NCBP2
RILLGL1ENSG00000131899.6chr17+1814389118145313181438911814418718145198181453130.523000.011710.07052includedHepG2SF3B4
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.132000.007360.09169includedHepG2FUBP3
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.259000.000010.00035includedHepG2HNRNPK
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.263000.005230.05370includedK562UTP18
RILLGL1ENSG00000131899.6chr17+1814014818141087181401481814025318140794181410870.178000.018400.09174includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LLGL1 is not avaliable on ENCORE database.