KDM5A

General Information

Gene Name : KDM5A
Gene ID : ENSG00000073614.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KDM5A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KDM5A	ENSG00000073614.12	21.25	13.98	17.62	ENCSR000AEF
HepG2	KDM5A	ENSG00000073614.12	7.80	11.45	9.62	ENCSR985KAT
K562	KDM5A	ENSG00000073614.12	8.07	7.26	7.67	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
KDM5A	Ribo-STAMP-293T	shRNA			KDM5A-BGRSLV04-13,KDM5A-BGRSLV04-14	NT-BGRSLV04-1,NT-BGRSLV04-2	,	Submitted	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KDM5A is not avaliable on ENCORE database.

Proteins bound to RNA

KDM5A RNA is bound by 32 proteins.

eCLIP assay for KDM5A is not avaliable on ENCORE database.

32 proteins are bound to KDM5A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	392550	392682	-	3'-UTR,intron-Distal	3.77680	6.89837	K562	KHSRP
chr12	391430	391495	-	3'-UTR,intron-Distal	3.77690	9.77722	HepG2	DROSHA
chr12	393574	393665	-	3'-UTR,intron-Distal	4.38260	4.31428	K562	YBX3
chr12	391015	391051	-	3'-UTR,intron-Distal	3.62506	5.58283	HepG2	DROSHA
chr12	390553	390608	-	3'-UTR,intron-Distal	5.11464	5.48218	K562	FAM120A
chr12	391057	391124	-	3'-UTR,intron-Distal	4.45372	9.78647	HepG2	DROSHA
chr12	391260	391336	-	3'-UTR,intron-Distal	6.17350	18.32669	HepG2	RBFOX2
chr12	391510	391637	-	3'-UTR,intron-Distal	3.51808	3.11910	K562	RBFOX2
chr12	390565	390616	-	3'-UTR,intron-Distal	3.55816	3.53159	HepG2	DROSHA
chr12	391062	391131	-	3'-UTR,intron-Distal	6.54888	27.05247	HepG2	RBFOX2
chr12	391495	391597	-	3'-UTR,intron-Distal	3.72967	10.52687	HepG2	DROSHA
chr12	391403	391468	-	3'-UTR,intron-Distal	5.58854	12.58138	HepG2	RBFOX2
chr12	391547	391665	-	3'-UTR,intron-Distal	6.97390	30.62609	HepG2	RBFOX2
chr12	390648	390673	-	3'-UTR,intron-Distal	4.16361	3.11728	K562	FAM120A
chr12	498264	498324	-	5'-UTR,intron-Distal	3.72817	4.22136	HepG2	RBM15
chr12	498220	498266	-	5'-UTR,CDS,intron-Distal	4.69385	3.81597	K562	RBM15
chr12	498258	498312	-	5'-UTR,intron-Distal	3.28501	4.41784	HepG2	GRWD1
chr12	498283	498348	-	5'-UTR,intron-Distal	3.73431	3.63681	K562	RBM15
chr12	498324	498394	-	5'-UTR,intron-Distal	4.72817	4.88132	HepG2	RBM15
chr12	401963	402036	-	CDS,intron-Distal	4.38270	4.07690	HepG2	ZNF800
chr12	416110	416243	-	CDS,intron-Distal,intron-Proximal	4.49616	4.39669	K562	BUD13
chr12	461370	461386	-	CDS,intron-Distal,intron-Proximal	5.26662	8.40988	HepG2	BCLAF1
chr12	472148	472228	-	CDS,intron-Distal	4.97569	12.44336	HepG2	BCLAF1
chr12	464337	464406	-	CDS,intron-Distal	3.09938	5.57447	HepG2	GRWD1
chr12	432768	432848	-	CDS,intron-Distal	3.40355	10.96545	HepG2	BCLAF1
chr12	417079	417150	-	CDS,intron-Distal	4.02079	10.35753	HepG2	BCLAF1
chr12	406258	406367	-	CDS,intron-Distal,intron-Proximal	3.77388	3.18004	K562	FXR1
chr12	465597	465659	-	CDS,intron-Distal,intron-Proximal	3.27212	3.94213	HepG2	LIN28B
chr12	401926	402061	-	CDS,intron-Distal	3.33269	8.94508	HepG2	FXR2
chr12	416114	416155	-	CDS,intron-Distal	3.22962	5.79905	HepG2	BCLAF1
chr12	440989	441088	-	CDS,intron-Distal	3.76662	12.82131	HepG2	BCLAF1
chr12	443523	443558	-	CDS,intron-Distal,intron-Proximal	4.78866	5.23259	HepG2	BCLAF1
chr12	432772	432865	-	CDS,intron-Distal	3.36440	6.45347	HepG2	GRWD1
chr12	495106	495150	-	CDS,intron-Distal,intron-Proximal	3.81253	5.18845	HepG2	U2AF2
chr12	441071	441118	-	CDS,intron-Distal,intron-Proximal	3.45541	3.91876	HepG2	U2AF2
chr12	427333	427404	-	CDS,intron-Distal	3.01640	7.03833	HepG2	BCLAF1
chr12	432328	432376	-	CDS,intron-Distal,intron-Proximal	4.25039	6.02363	HepG2	U2AF2
chr12	495097	495133	-	CDS,intron-Distal	3.08691	3.28108	K562	U2AF2
chr12	404808	404953	-	CDS,intron-Distal	5.11391	7.89484	K562	FXR2
chr12	461407	461457	-	CDS,intron-Distal	5.26162	7.49561	HepG2	BCLAF1
chr12	427271	427328	-	CDS,intron-Distal,intron-Proximal	3.38398	4.71371	HepG2	GRWD1
chr12	401930	402071	-	CDS,intron-Distal	5.19746	7.84234	K562	ZNF622
chr12	475101	475133	-	CDS,intron-Distal,intron-Proximal	3.94624	7.89209	HepG2	BCLAF1
chr12	432765	432878	-	CDS,intron-Distal,intron-Proximal	3.92540	4.43797	HepG2	UCHL5
chr12	401995	402192	-	CDS,intron-Distal,intron-Proximal	4.27473	3.83856	K562	CPSF6
chr12	437998	438084	-	CDS,intron-Distal,intron-Proximal	3.20312	3.99124	HepG2	PPIG
chr12	459874	460008	-	CDS,intron-Distal,intron-Proximal	6.03061	12.52888	K562	SF3B4
chr12	495133	495147	-	CDS,intron-Distal,intron-Proximal	3.03601	3.29838	K562	U2AF2
chr12	427332	427414	-	CDS,intron-Distal	3.50697	5.30777	HepG2	PPIG
chr12	493205	493298	-	CDS,intron-Distal	4.95704	8.84267	HepG2	GRWD1
chr12	459792	459849	-	CDS,intron-Distal	4.53977	16.44038	HepG2	BCLAF1
chr12	459790	459889	-	CDS,intron-Distal	3.88707	5.80935	K562	ZNF622
chr12	418974	419037	-	CDS,intron-Distal,intron-Proximal	4.05410	9.39582	HepG2	BCLAF1
chr12	417003	417066	-	CDS,intron-Distal,intron-Proximal	4.00459	3.48187	K562	RBM15
chr12	402040	402161	-	CDS,intron-Distal,intron-Proximal	4.18988	6.81811	K562	UCHL5
chr12	459849	459883	-	CDS,intron-Distal	3.58114	7.42278	HepG2	BCLAF1
chr12	461329	461388	-	CDS,intron-Distal,intron-Proximal	3.89122	3.71591	HepG2	PRPF8
chr12	465598	465654	-	CDS,intron-Distal	4.27813	9.37631	HepG2	BCLAF1
chr12	475071	475130	-	CDS,intron-Distal,intron-Proximal	4.69900	3.70131	HepG2	PRPF8
chr12	459923	459946	-	CDS,intron-Distal,intron-Proximal	5.15084	7.95223	HepG2	BCLAF1
chr12	475162	475261	-	CDS,intron-Distal,intron-Proximal	4.18784	15.30407	HepG2	BCLAF1
chr12	493210	493295	-	CDS,intron-Distal	6.07751	15.35511	HepG2	BCLAF1
chr12	417101	417167	-	CDS,intron-Distal	5.13431	5.85077	HepG2	FXR2
chr12	463240	463303	-	CDS,intron-Distal,intron-Proximal	3.42791	10.08874	HepG2	BCLAF1
chr12	401926	402040	-	CDS,intron-Distal	3.61126	8.77730	K562	UCHL5
chr12	418966	419066	-	CDS,intron-Distal,intron-Proximal	4.03088	5.08388	K562	UCHL5
chr12	465597	465662	-	CDS,intron-Distal,intron-Proximal	4.39593	4.55369	K562	LIN28B
chr12	463325	463399	-	CDS,intron-Distal	4.17666	11.21209	HepG2	BCLAF1
chr12	416863	416917	-	CDS,intron-Distal	4.04114	3.43980	K562	ZNF622
chr12	495071	495091	-	CDS,intron-Distal	3.62407	4.17155	HepG2	BCLAF1
chr12	463336	463389	-	CDS,intron-Distal	4.00752	4.04622	HepG2	GRWD1
chr12	461453	461543	-	CDS,intron-Distal,intron-Proximal	5.10439	6.40247	K562	SF3B4
chr12	416847	416914	-	CDS,intron-Distal	3.34455	3.95937	K562	UCHL5
chr12	401937	402032	-	CDS,intron-Distal	3.75404	5.28199	HepG2	GRWD1
chr12	493280	493348	-	CDS,intron-Distal,intron-Proximal	3.28229	4.09002	HepG2	BUD13
chr12	465597	465683	-	CDS,intron-Distal,intron-Proximal	4.41400	3.63055	K562	ZNF800
chr12	461323	461381	-	CDS,intron-Distal,intron-Proximal	4.86153	4.96013	K562	PRPF8
chr12	394795	394852	-	CDS,intron-Distal	3.77734	3.95921	HepG2	U2AF2
chr12	427342	427449	-	CDS,intron-Distal	3.75370	3.39593	HepG2	PRPF4
chr12	464326	464414	-	CDS,intron-Distal	4.45011	16.44038	HepG2	BCLAF1
chr12	427279	427322	-	CDS,intron-Distal	4.25660	8.49795	HepG2	BCLAF1
chr12	459791	459887	-	CDS,intron-Distal	3.05928	7.04499	HepG2	GRWD1
chr12	427271	427313	-	CDS,intron-Distal,intron-Proximal	4.19092	3.43980	K562	ZNF622
chr12	406207	406235	-	CDS,intron-Distal	3.26385	3.94979	HepG2	BCLAF1
chr12	401947	402013	-	CDS,intron-Distal	4.30115	9.69111	HepG2	BCLAF1
chr12	430164	430196	-	CDS,intron-Distal	4.05410	5.79432	HepG2	BCLAF1
chr12	394778	394807	-	CDS,intron-Distal	3.06588	3.94979	HepG2	BCLAF1
chr12	417019	417067	-	CDS,intron-Distal,intron-Proximal	3.07387	7.17439	HepG2	BCLAF1
chr12	431581	431714	-	CDS,intron-Distal,intron-Proximal	3.22327	9.69611	HepG2	BCLAF1
chr12	472237	472263	-	CDS,intron-Distal	5.31005	8.75808	HepG2	BCLAF1
chr12	432868	432948	-	CDS,intron-Distal,intron-Proximal	4.34560	10.24470	HepG2	BCLAF1
chr12	475109	475263	-	CDS,intron-Distal,intron-Proximal	3.46888	9.58775	HepG2	GRWD1
chr12	442652	442734	-	CDS,intron-Distal,intron-Proximal	4.36743	15.91092	HepG2	BCLAF1
chr12	406276	406322	-	CDS,intron-Distal	3.92791	8.51432	HepG2	BCLAF1
chr12	432864	432950	-	CDS,intron-Distal,intron-Proximal	3.53958	6.81103	HepG2	PPIG
chr12	461457	461485	-	CDS,intron-Distal	3.87282	5.35703	HepG2	BCLAF1
chr12	494977	495143	-	CDS,intron-Distal,intron-Proximal	3.27501	3.78727	K562	PRPF8
chr12	402094	402197	-	CDS,intron-Distal,intron-Proximal	3.08775	3.83179	HepG2	AQR
chr12	495066	495124	-	CDS,intron-Distal	4.51793	4.97342	HepG2	PPIG
chr12	471406	471462	-	intron-Distal	4.39308	3.92866	K562	PTBP1
chr12	464932	464999	-	intron-Distal	4.04126	3.75546	HepG2	KHSRP
chr12	469482	469549	-	intron-Distal	4.02959	7.16876	K562	PTBP1
chr12	440612	440728	-	intron-Distal	4.73545	13.12839	K562	PTBP1
chr12	440624	440734	-	intron-Distal	4.99834	19.02243	HepG2	PTBP1
chr12	468878	468912	-	intron-Distal	4.45577	3.44037	HepG2	DDX59
chr12	489794	489890	-	intron-Distal	3.78256	4.32282	HepG2	ILF3
chr12	441817	441931	-	intron-Distal	6.30246	39.57826	HepG2	QKI
chr12	422947	423032	-	intron-Distal	4.67757	5.20135	HepG2	QKI
chr12	469983	470106	-	intron-Distal	4.20955	4.47026	K562	MATR3
chr12	469484	469550	-	intron-Distal	4.07605	12.70073	HepG2	PTBP1
chr12	453044	453135	-	intron-Distal	3.19005	3.10640	HepG2	SUGP2
chr12	454530	454589	-	intron-Distal	3.42655	3.14999	K562	EXOSC5
chr12	479662	479776	-	intron-Distal	3.63649	4.61887	HepG2	CSTF2
chr12	469550	469572	-	intron-Distal	4.70182	4.40847	HepG2	PTBP1
chr12	468886	469018	-	intron-Distal	4.34959	4.58231	HepG2	HNRNPK
chr12	454521	454599	-	intron-Distal	3.88975	6.25619	HepG2	SUGP2
chr12	432598	432693	-	intron-Distal,intron-Proximal	5.05688	5.07478	HepG2	U2AF2
chr12	441826	442009	-	intron-Distal	8.56329	59.77000	K562	QKI
chr12	486744	486861	-	intron-Distal	3.91071	3.24603	K562	KHSRP
chr12	404389	404447	-	intron-Distal	5.61972	12.28789	HepG2	PTBP1
chr12	441931	442016	-	intron-Distal	5.02836	22.31163	HepG2	QKI
chr12	471395	471462	-	intron-Distal	4.84059	11.90381	HepG2	PTBP1
chr12	441728	441764	-	intron-Distal	4.63634	5.20135	HepG2	QKI
chr12	468921	469034	-	intron-Distal	6.70390	26.47206	HepG2	PCBP2
chr12	469489	469565	-	intron-Distal	4.37051	3.72005	K562	MATR3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for KDM5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KDM5A is not available on ENCORE database.
62 RBPs can affect the levels of KDM5A.

The Knockdown/knockout RNA-Seq assay for KDM5A is not available on ENCORE database.

62 RBPs can affect the gene expression of KDM5A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KDM5A	ENSG00000073614.7	2403.18130	1796.30680	0.41980	3.02870	2.47490	HepG2	AKAP1
KDM5A	ENSG00000073614.7	1187.94770	1486.29680	-0.32330	2.08740	1.40120	HepG2	ASCC1
KDM5A	ENSG00000073614.7	687.30090	1136.16240	-0.72520	6.13540	4.71660	HepG2	BCCIP
KDM5A	ENSG00000073614.7	1438.39590	1142.93690	0.33160	2.44360	1.71570	HepG2	CALR
KDM5A	ENSG00000073614.7	1736.12210	1522.34340	0.18950	1.98700	1.34290	HepG2	DAZAP1
KDM5A	ENSG00000073614.7	1008.18010	1230.19320	-0.28710	2.02750	1.43610	HepG2	DDX21
KDM5A	ENSG00000073614.7	2173.51840	1720.73400	0.33690	2.38850	1.80260	HepG2	DDX3X
KDM5A	ENSG00000073614.7	1699.29350	1211.12640	0.48850	2.18490	1.32030	HepG2	DDX59
KDM5A	ENSG00000073614.7	1148.95770	1454.53680	-0.34020	4.24280	3.43930	HepG2	DKC1
KDM5A	ENSG00000073614.7	958.53540	1132.33120	-0.24040	1.98570	1.37930	HepG2	DNAJC21
KDM5A	ENSG00000073614.7	1142.16480	858.12030	0.41240	3.05650	2.11080	HepG2	EIF3D
KDM5A	ENSG00000073614.7	1767.24020	1438.65570	0.29670	2.08570	1.37130	HepG2	EIF4G2
KDM5A	ENSG00000073614.7	1185.26840	1485.69930	-0.32590	2.82940	1.98500	HepG2	EWSR1
KDM5A	ENSG00000073614.7	1129.67490	816.11880	0.46900	4.57060	3.57460	HepG2	FUBP3
KDM5A	ENSG00000073614.7	1917.56930	1469.77510	0.38360	2.76310	2.09860	HepG2	G3BP1
KDM5A	ENSG00000073614.7	727.87320	1143.17900	-0.65130	7.73730	6.73900	HepG2	HNRNPA1
KDM5A	ENSG00000073614.7	1911.97610	1488.24670	0.36140	3.01130	2.28350	HepG2	HNRNPK
KDM5A	ENSG00000073614.7	815.17180	1263.16020	-0.63190	12.14720	10.95040	HepG2	HNRNPU
KDM5A	ENSG00000073614.7	1094.52870	1290.27790	-0.23740	2.67810	1.95690	HepG2	ILF2
KDM5A	ENSG00000073614.7	1548.83870	1997.44910	-0.36700	2.22330	1.48560	HepG2	LARP4
KDM5A	ENSG00000073614.7	2034.68920	1631.37250	0.31860	2.07680	1.52410	HepG2	NCBP2
KDM5A	ENSG00000073614.7	2050.46250	1370.08750	0.58160	3.89550	2.67050	HepG2	PCBP2
KDM5A	ENSG00000073614.7	838.15760	1126.63950	-0.42670	5.02700	4.06190	HepG2	PPIL4
KDM5A	ENSG00000073614.7	975.73910	1440.39000	-0.56190	2.72040	1.51070	HepG2	PRPF6
KDM5A	ENSG00000073614.7	1124.67730	861.84910	0.38390	2.75310	1.94640	HepG2	PRPF8
KDM5A	ENSG00000073614.7	1062.09960	1440.97340	-0.44010	2.16890	1.63240	HepG2	PUF60
KDM5A	ENSG00000073614.7	996.22340	1548.53230	-0.63640	14.74480	13.52080	HepG2	PUS1
KDM5A	ENSG00000073614.7	2427.64930	1565.03050	0.63330	12.60600	11.41450	HepG2	QKI
KDM5A	ENSG00000073614.7	1721.51620	1420.40570	0.27730	2.33320	1.70860	HepG2	RBM25
KDM5A	ENSG00000073614.7	1842.20300	1397.41080	0.39860	3.52850	2.77290	HepG2	RPLP0
KDM5A	ENSG00000073614.7	809.69440	1124.90520	-0.47440	7.29020	6.31550	HepG2	SAFB2
KDM5A	ENSG00000073614.7	1696.50990	1141.88780	0.57100	6.44520	5.40590	HepG2	SF3B1
KDM5A	ENSG00000073614.7	2014.39200	1504.50170	0.42100	7.17380	6.29330	HepG2	SF3B4
KDM5A	ENSG00000073614.7	1069.98320	1311.83840	-0.29400	3.93090	3.18690	HepG2	SMN1
KDM5A	ENSG00000073614.7	1776.34940	1270.56590	0.48330	2.65750	1.89220	HepG2	SNRNP70
KDM5A	ENSG00000073614.7	2612.50370	2182.38190	0.25940	3.99460	3.42460	HepG2	SRFBP1
KDM5A	ENSG00000073614.7	1685.61980	1422.71980	0.24450	2.63120	2.01720	HepG2	SRSF5
KDM5A	ENSG00000073614.7	1769.85880	1277.64380	0.47000	9.08290	8.18640	HepG2	SRSF9
KDM5A	ENSG00000073614.7	873.59340	1227.42930	-0.49060	5.92370	5.24370	HepG2	TIAL1
KDM5A	ENSG00000073614.7	655.11800	1238.36610	-0.91860	23.23550	21.79940	HepG2	TRIM56
KDM5A	ENSG00000073614.7	1628.50050	1185.63930	0.45780	4.42570	3.63990	HepG2	U2AF1
KDM5A	ENSG00000073614.7	463.70690	656.94930	-0.50260	3.30880	2.48080	HepG2	UCHL5
KDM5A	ENSG00000073614.7	1759.39920	1535.52020	0.19630	1.99790	1.38800	HepG2	UPF1
KDM5A	ENSG00000073614.7	630.58130	1018.39760	-0.69150	4.31110	3.04310	HepG2	UPF2
KDM5A	ENSG00000073614.7	871.19660	1482.48200	-0.76690	18.24720	16.91350	HepG2	UTP3
KDM5A	ENSG00000073614.7	572.44030	1094.69340	-0.93530	11.05880	9.62670	HepG2	XRN2
KDM5A	ENSG00000073614.7	1451.60690	1093.74140	0.40830	6.63600	5.66950	HepG2	ZC3H8
KDM5A	ENSG00000073614.7	1420.88760	1688.77600	-0.24920	3.40080	2.81220	HepG2	ZNF622
KDM5A	ENSG00000073614.7	2240.01760	1758.80380	0.34880	3.00850	2.40120	K562	AQR
KDM5A	ENSG00000073614.7	1459.32970	1775.01860	-0.28250	2.46800	1.36780	K562	CCDC124
KDM5A	ENSG00000073614.7	1122.61460	926.87740	0.27630	2.07270	1.38490	K562	CPSF6
KDM5A	ENSG00000073614.7	1456.60210	1755.30240	-0.26910	3.07030	2.38780	K562	DDX47
KDM5A	ENSG00000073614.7	1376.82740	1663.09350	-0.27250	2.73560	1.86730	K562	DKC1
KDM5A	ENSG00000073614.7	951.46700	1220.85030	-0.35970	2.82560	1.96720	K562	FIP1L1
KDM5A	ENSG00000073614.7	1223.45680	943.14290	0.37530	2.78540	1.92820	K562	FMR1
KDM5A	ENSG00000073614.7	1199.52930	1780.37690	-0.56970	7.23710	6.00330	K562	GRSF1
KDM5A	ENSG00000073614.7	715.94430	1004.18700	-0.48810	3.49500	2.43770	K562	HNRNPM
KDM5A	ENSG00000073614.7	1217.00550	1487.22770	-0.28930	2.81120	1.91010	K562	HNRNPU
KDM5A	ENSG00000073614.7	1257.32170	1655.18530	-0.39660	3.44080	2.55500	K562	HSPD1
KDM5A	ENSG00000073614.7	1267.28150	1024.46920	0.30680	2.63580	1.85650	K562	POLR2G
KDM5A	ENSG00000073614.7	974.37410	1385.93580	-0.50830	5.04680	3.88330	K562	PPIG
KDM5A	ENSG00000073614.7	963.17750	1483.92360	-0.62350	9.13770	7.97760	K562	PTBP1
KDM5A	ENSG00000073614.7	705.20270	912.68830	-0.37210	2.77660	1.69200	K562	SAFB
KDM5A	ENSG00000073614.7	485.05810	668.76220	-0.46330	3.14100	2.03000	K562	SRFBP1
KDM5A	ENSG00000073614.7	1157.37020	1420.19570	-0.29520	2.48670	1.71700	K562	TIA1
KDM5A	ENSG00000073614.7	589.16820	790.09720	-0.42340	3.18190	2.15210	K562	TRIM56
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KDM5A is not available on ENCORE database.

11 RBPs can affect the splicing of KDM5A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.37400	0.00003	0.00110	included	K562	SRSF1
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.27300	0.00025	0.08709	included	K562	XRN2
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	-0.16500	0.00034	0.01350	excluded	K562	AKAP8L
SE	KDM5A	ENSG00000073614.7	chr12	-	432247	432372	431582	431733	432765	432947	-0.12100	0.00067	0.00873	excluded	K562	AQR
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	-0.12300	0.00395	0.05197	excluded	K562	PUS1
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.28300	0.00121	0.02973	included	HepG2	SRSF1
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.24700	0.00002	0.01897	included	K562	PUM2
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.31000	0.00015	0.02079	included	HepG2	SUPV3L1
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.25600	0.00001	0.00065	included	K562	TARDBP
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	-0.16100	0.00056	0.01747	excluded	K562	AGGF1
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.20700	0.00139	0.07715	included	HepG2	SRSF9
SE	KDM5A	ENSG00000073614.7	chr12	-	395291	395373	394621	394828	401924	402091	0.35900	0.00000	0.00058	included	HepG2	FUS
A3SS	KDM5A	ENSG00000073614.7	chr12	-	475211	475395	475211	475270	493196	493344	0.06800	0.00540	0.03091	longer	K562	AQR
A3SS	KDM5A	ENSG00000073614.7	chr12	-	431582	431828	431582	431733	432247	432372	0.10000	0.00615	0.03466	longer	K562	AQR
A3SS	KDM5A	ENSG00000073614.7	chr12	-	442652	442839	442652	442815	443406	443606	0.11300	0.00507	0.02925	longer	K562	AQR
A3SS	KDM5A	ENSG00000073614.7	chr12	-	416111	416321	416111	416255	416619	417171	0.13600	0.00000	0.00005	longer	K562	AQR
A3SS	KDM5A	ENSG00000073614.7	chr12	-	493196	493344	493196	493319	495062	495140	0.07000	0.01470	0.07352	longer	K562	AQR
A5SS	KDM5A	ENSG00000073614.7	chr12	-	440959	441104	440984	441104	438000	438195	0.10800	0.00587	0.08207	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KDM5A

General Information

Functions

Localization

Domains (AlphaFold: KDM5A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KDM5A is not avaliable on ENCORE database.

32 proteins are bound to KDM5A RNA:

eCLIP assay for KDM5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KDM5A is not available on ENCORE database.

62 RBPs can affect the gene expression of KDM5A :

The Knockdown/knockout RNA-Seq assay for KDM5A is not available on ENCORE database.

11 RBPs can affect the splicing of KDM5A :

The Knockdown/knockout RNA-Seq assay for KDM5A is not avaliable on ENCORE database.