HIAT1

General Information

Gene Name       : HIAT1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIAT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIAT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIAT1 RNA is bound by 29 proteins.  







eCLIP assay for HIAT1 is not avaliable on ENCORE database.





29 proteins are bound to HIAT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1100548125100548187+3'-UTR4.649565.48503HepG2LIN28B
chr1100548659100548741+3'-UTR5.5650860.49761K562PUM2
chr1100548771100548889+3'-UTR3.794049.70788K562KHSRP
chr1100548798100548862+3'-UTR4.091003.09432HepG2ZC3H11A
chr1100548741100548767+3'-UTR5.6017523.58215K562PUM2
chr1100547660100547775+3'-UTR,CDS3.943053.31982HepG2IGF2BP1
chr1100548780100548875+3'-UTR5.9943412.80585HepG2FUBP3
chr1100548849100548893+3'-UTR4.5878815.01495K562PUM2
chr1100548769100548849+3'-UTR6.0610882.00713K562PUM2
chr1100548116100548180+3'-UTR4.005253.02060K562LIN28B
chr1100548794100548864+3'-UTR5.255516.63769HepG2DDX55
chr1100503669100503784+5'-UTR5.2291067.21137HepG2DDX3X
chr1100503681100503781+5'-UTR3.9990611.03053K562DDX3X
chr1100525429100525476+CDS,intron-Proximal3.386653.95214K562GPKOW
chr1100527405100527484+CDS3.491515.26861K562DDX24
chr1100524283100524289+CDS,intron-Proximal3.123633.93669K562AQR
chr1100533728100533785+CDS,intron-Proximal3.212334.78164HepG2PRPF8
chr1100543997100544038+CDS,intron-Proximal3.533715.56719K562SF3B4
chr1100547554100547606+CDS,intron-Proximal4.367623.77802HepG2U2AF2
chr1100533475100533541+CDS,intron-Proximal4.244456.10653K562SF3B4
chr1100524220100524270+CDS,intron-Proximal3.190914.30683K562BUD13
chr1100542713100542758+CDS,intron-Proximal4.036603.95991K562U2AF2
chr1100515510100515563+CDS,intron-Proximal3.990507.97611K562DDX24
chr1100543987100544066+CDS,intron-Proximal3.672878.87150K562U2AF2
chr1100542943100543019+intron-Distal4.004595.25185K562PRPF8
chr1100531387100531463+intron-Distal3.381304.48425K562CSTF2T
chr1100531212100531264+intron-Distal4.674864.86763HepG2PCBP2
chr1100504235100504304+intron-Distal3.824463.77743K562DDX52
chr1100542943100543029+intron-Distal4.6607413.37458K562KHSRP
chr1100511583100511622+intron-Distal4.155043.30687K562EXOSC5
chr1100537136100537235+intron-Distal3.899103.05187HepG2QKI
chr1100531323100531452+intron-Distal5.9473521.37948K562PTBP1
chr1100504100100504167+intron-Distal3.493665.25167K562TIA1
chr1100538487100538545+intron-Distal3.049463.20529K562HNRNPL
chr1100511038100511168+intron-Distal3.466088.54522K562RBFOX2
chr1100542869100542939+intron-Distal,intron-Proximal5.4302810.11363K562PRPF8
chr1100510952100511013+intron-Distal3.102004.46810K562EXOSC5
chr1100531279100531455+intron-Distal5.1887218.61407HepG2PTBP1
chr1100537844100537910+intron-Distal3.195143.10770K562RBFOX2
chr1100542876100542937+intron-Distal,intron-Proximal3.097663.37074K562TIA1
chr1100504374100504440+intron-Distal3.198705.41408K562NONO
chr1100514143100514233+intron-Distal4.299783.53723HepG2PTBP1
chr1100503943100503985+intron-Distal,intron-Proximal4.911463.92758K562PCBP1
chr1100537151100537246+intron-Distal3.744925.50753K562QKI
chr1100509951100510018+intron-Distal4.779186.08953K562EXOSC5
chr1100503979100504031+intron-Distal3.841976.45532K562GEMIN5
chr1100504183100504236+intron-Distal3.928153.93949K562GEMIN5
chr1100510811100510885+intron-Distal4.296873.89786K562RBFOX2
chr1100539534100539603+intron-Distal4.055083.93366K562RBFOX2
chr1100504216100504283+intron-Distal4.477184.72743K562NONO
chr1100531371100531470+intron-Distal4.433028.35855K562ILF3
chr1100538581100538642+intron-Distal3.046633.63194K562HNRNPL
chr1100504741100504808+intron-Distal4.033103.06347K562NONO
chr1100531219100531258+intron-Distal4.833594.30178K562PTBP1
chr1100504283100504370+intron-Distal5.234238.79830K562NONO
chr1100514125100514228+intron-Distal4.450823.18981K562PTBP1
chr1100531302100531456+intron-Distal6.1763714.36939HepG2PCBP2
chr1100524289100524312+intron-Proximal4.371335.97994K562AQR
chr1100515585100515645+intron-Proximal3.378393.88924K562PRPF8
chr1100542865100542933+intron-Proximal4.036355.84589K562EFTUD2
chr1100524312100524340+intron-Proximal4.442345.97994K562AQR
chr1100543944100543997+intron-Proximal4.9898518.18623K562SF3B4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIAT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIAT1 is not available on ENCORE database.

  • 81 RBPs can affect the levels of HIAT1.  








The Knockdown/knockout RNA-Seq assay for HIAT1 is not available on ENCORE database.





81 RBPs can affect the gene expression of HIAT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIAT1ENSG00000156875.9963.754401154.73900-0.260802.684002.08470HepG2ACO1
HIAT1ENSG00000156875.91250.407702052.76940-0.715208.742407.39830HepG2ASCC1
HIAT1ENSG00000156875.9710.72560932.25200-0.391402.202901.37000HepG2BCCIP
HIAT1ENSG00000156875.91576.461501265.222700.317202.967702.17070HepG2CALR
HIAT1ENSG00000156875.9950.987801154.31540-0.279503.059402.36720HepG2CKAP4
HIAT1ENSG00000156875.91421.479101007.408600.496604.664303.79240HepG2CPSF6
HIAT1ENSG00000156875.91791.947901523.838900.233702.695201.96160HepG2DAZAP1
HIAT1ENSG00000156875.9717.720601017.34410-0.503305.882704.25240HepG2DDX1
HIAT1ENSG00000156875.9588.10180885.36710-0.590205.846204.90050HepG2DDX21
HIAT1ENSG00000156875.91097.95750866.361700.341702.743601.83570HepG2DDX24
HIAT1ENSG00000156875.91760.959002376.59150-0.432503.626902.92120HepG2DDX3X
HIAT1ENSG00000156875.9659.86930916.60410-0.474103.037002.23270HepG2DDX55
HIAT1ENSG00000156875.91584.084202041.34270-0.365902.381101.80440HepG2DDX6
HIAT1ENSG00000156875.9627.42960988.83660-0.6563012.6756011.38820HepG2DNAJC2
HIAT1ENSG00000156875.9776.680101058.18540-0.446203.191202.20680HepG2EEF2
HIAT1ENSG00000156875.9979.555601962.58940-1.0026015.6149014.27740HepG2EIF2S1
HIAT1ENSG00000156875.91623.823702168.98730-0.417602.930302.27240HepG2EIF4A3
HIAT1ENSG00000156875.9776.369802111.63150-1.4435021.2982019.51810HepG2EIF4B
HIAT1ENSG00000156875.91961.417501439.990600.445704.090203.11270HepG2EIF4G2
HIAT1ENSG00000156875.91006.939901593.16990-0.661906.423905.29840HepG2FIP1L1
HIAT1ENSG00000156875.91206.507702188.12880-0.8589012.3503010.99580HepG2FXR1
HIAT1ENSG00000156875.91286.953802029.96200-0.657506.936005.90170HepG2G3BP1
HIAT1ENSG00000156875.91557.496102154.86660-0.468404.374003.24170HepG2G3BP2
HIAT1ENSG00000156875.9873.278901141.94560-0.387002.456901.85000HepG2GPKOW
HIAT1ENSG00000156875.91155.835202055.16620-0.8303012.9554011.55020HepG2HNRNPK
HIAT1ENSG00000156875.91049.494801388.16050-0.403505.669704.73540HepG2HNRNPL
HIAT1ENSG00000156875.91490.394801089.782500.451603.819703.09030HepG2HNRNPLL
HIAT1ENSG00000156875.9903.119901112.83770-0.301303.204702.55570HepG2HNRNPU
HIAT1ENSG00000156875.91579.498502063.46610-0.385602.994402.29630HepG2IGF2BP2
HIAT1ENSG00000156875.9835.735601136.72100-0.443807.233006.10650HepG2ILF2
HIAT1ENSG00000156875.91430.482002075.39330-0.536903.967602.74690HepG2KHSRP
HIAT1ENSG00000156875.9729.97170948.72860-0.378202.610001.50870HepG2LARP7
HIAT1ENSG00000156875.91447.784602188.89140-0.596406.245805.27010HepG2MAGOH
HIAT1ENSG00000156875.91280.387702201.18930-0.781709.101908.01080HepG2MATR3
HIAT1ENSG00000156875.91073.140001289.06510-0.264502.088301.38110HepG2MSI2
HIAT1ENSG00000156875.91306.371002253.07780-0.786309.877908.72450HepG2NCBP2
HIAT1ENSG00000156875.91416.458101929.23140-0.445707.050606.15480HepG2PCBP1
HIAT1ENSG00000156875.91279.498401080.111300.244302.354001.63380HepG2PRPF4
HIAT1ENSG00000156875.91166.916901962.97280-0.7503014.0813013.03400HepG2PTBP1
HIAT1ENSG00000156875.91105.133901442.35060-0.384203.735503.05430HepG2PUF60
HIAT1ENSG00000156875.91744.977002126.14460-0.285003.150502.49050HepG2QKI
HIAT1ENSG00000156875.91812.987901102.289300.717804.456803.57300HepG2RAVER1
HIAT1ENSG00000156875.91146.222901532.58480-0.419105.463804.79780HepG2RBM22
HIAT1ENSG00000156875.91010.994102184.67690-1.1116030.1959028.81090HepG2NELFE
HIAT1ENSG00000156875.91273.456602034.59060-0.6760016.7524015.44460HepG2RECQL
HIAT1ENSG00000156875.9880.557601173.14540-0.413903.519002.76400HepG2RPLP0
HIAT1ENSG00000156875.9615.69590835.85840-0.441003.613702.92080HepG2RPS19
HIAT1ENSG00000156875.9786.763501055.10110-0.423402.957902.13220HepG2RPS2
HIAT1ENSG00000156875.92270.716901780.840600.350501.985601.41260HepG2SF3A3
HIAT1ENSG00000156875.91322.059201078.651700.293501.994301.38990HepG2SF3B1
HIAT1ENSG00000156875.91269.650102043.87350-0.6869014.3602013.17550HepG2SF3B4
HIAT1ENSG00000156875.9914.657801155.65220-0.337403.523702.81210HepG2SMN1
HIAT1ENSG00000156875.92044.008501731.029500.239703.199102.67330HepG2SRFBP1
HIAT1ENSG00000156875.91446.527402133.29390-0.5605010.8810010.07750HepG2SRSF1
HIAT1ENSG00000156875.91283.259001735.49010-0.435505.984805.22860HepG2SRSF9
HIAT1ENSG00000156875.91161.484501619.58500-0.479709.996808.93780HepG2SUCLG1
HIAT1ENSG00000156875.91659.329601917.30040-0.208502.027101.53420HepG2TAF15
HIAT1ENSG00000156875.91312.658301062.281500.305202.115501.46960HepG2TARDBP
HIAT1ENSG00000156875.91437.459901761.93670-0.293602.060601.33640HepG2TIA1
HIAT1ENSG00000156875.9805.253401081.20100-0.425104.295203.70030HepG2TIAL1
HIAT1ENSG00000156875.9705.081501091.00440-0.6298011.0314010.01780HepG2TRIM56
HIAT1ENSG00000156875.9983.322401362.65830-0.470704.528803.73510HepG2U2AF1
HIAT1ENSG00000156875.91172.808401491.34640-0.346602.208001.46510HepG2UBE2L3
HIAT1ENSG00000156875.91205.269301579.32970-0.390006.111705.14090HepG2UPF1
HIAT1ENSG00000156875.9651.71600898.21240-0.462803.217102.43820HepG2XRN2
HIAT1ENSG00000156875.92453.185701453.588000.7549017.3817016.08110K562AGGF1
HIAT1ENSG00000156875.92677.280201512.555100.8237015.9273014.13020K562AKAP8L
HIAT1ENSG00000156875.93690.115701779.925701.0517024.1815022.63860K562AQR
HIAT1ENSG00000156875.91699.292402036.96490-0.261503.061402.37990K562DDX47
HIAT1ENSG00000156875.91086.898901277.76600-0.233401.970901.34540K562EIF2S2
HIAT1ENSG00000156875.9758.232701010.37650-0.414203.273101.99460K562EIF4B
HIAT1ENSG00000156875.9775.320801063.20040-0.455503.598402.92930K562HNRNPC
HIAT1ENSG00000156875.92697.817101605.090800.749006.959505.50850K562KIF1C
HIAT1ENSG00000156875.92517.155701798.122200.485203.094902.12360K562MBNL1
HIAT1ENSG00000156875.91156.058401381.34460-0.256902.815601.99900K562MTPAP
HIAT1ENSG00000156875.92487.084401260.363000.980506.702505.11150K562NAA15
HIAT1ENSG00000156875.92012.255201352.692600.572902.502901.57410K562PABPN1
HIAT1ENSG00000156875.91040.395301415.76870-0.444504.950204.08600K562PTBP1
HIAT1ENSG00000156875.94112.451001499.819001.4551042.6732040.47410K562PUS1
HIAT1ENSG00000156875.91812.249701198.316400.596703.555601.91100K562RAVER1
HIAT1ENSG00000156875.92898.065301461.530500.9875019.3883017.78370K562RBM15
HIAT1ENSG00000156875.91016.908401357.78260-0.417103.735902.74690K562RBM22
HIAT1ENSG00000156875.91588.185601191.356400.414703.994502.35190K562RBM25
HIAT1ENSG00000156875.9986.378701428.79540-0.534605.258803.68490K562NELFE
HIAT1ENSG00000156875.9711.44460936.10340-0.395902.257001.52270K562RPS19
HIAT1ENSG00000156875.91022.687301432.69170-0.486404.102502.85530K562RPS3
HIAT1ENSG00000156875.9946.492101354.98910-0.517606.158004.86630K562TIA1
HIAT1ENSG00000156875.91569.455601217.512500.366202.419801.40730K562U2AF1
HIAT1ENSG00000156875.91549.850701257.384300.301602.815002.00430K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIAT1 is not available on ENCORE database.





7 RBPs can affect the splicing of HIAT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHIAT1ENSG00000156875.9chr1+1005086281005087851005036521005038721005154641005155600.299000.000000.00000includedK562SRSF1
SEHIAT1ENSG00000156875.9chr1+1005086281005087851005036521005038721005154641005155600.058000.001800.05758includedK562PRPF8
SEHIAT1ENSG00000156875.9chr1+100524221100524284100515464100515560100525433100525561-0.064000.000000.00002excludedK562AQR
SEHIAT1ENSG00000156875.9chr1+100534028100534142100533532100533751100535169100535241-0.053000.007070.06170excludedK562AQR
SEHIAT1ENSG00000156875.9chr1+1005086281005087851005036521005038721005154641005155600.053000.002250.09139includedK562EFTUD2
SEHIAT1ENSG00000156875.9chr1+1005086281005087851005036521005038721005154641005155600.163000.000000.00000includedHepG2SRSF1
MXEHIAT1ENSG00000156875.9chr1+1005340111005341421005351691005352411005335321005337511005427201005428330.107000.001560.027731includedK562U2AF1
MXEHIAT1ENSG00000156875.9chr1+1005154141005155601005242211005242841005036521005038721005254331005255610.102000.000000.000001includedK562AQR
MXEHIAT1ENSG00000156875.9chr1+1005340111005341421005351691005352411005335321005337511005427201005428330.060000.001510.013041includedK562AQR
MXEHIAT1ENSG00000156875.9chr1+1005340111005341421005351011005352411005335321005337511005427201005428330.073000.001110.010011includedK562AQR
MXEHIAT1ENSG00000156875.9chr1+1005340281005341421005351691005352411005335321005337511005427201005428330.234000.000030.002371includedHepG2XRN2
MXEHIAT1ENSG00000156875.9chr1+1005340281005341421005351691005352411005335321005337511005427201005428330.189000.001920.087511includedK562SERBP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HIAT1 is not avaliable on ENCORE database.