GXYLT1

General Information

Gene Name       : GXYLT1
Gene ID             : ENSG00000151233.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GXYLT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GXYLT1ENSG00000151233.1011.206.969.08ENCSR000AEF
HepG2GXYLT1ENSG00000151233.1011.4223.9617.69ENCSR985KAT
K562GXYLT1ENSG00000151233.105.054.244.64ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GXYLT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GXYLT1 RNA is bound by 6 proteins.  







eCLIP assay for GXYLT1 is not avaliable on ENCORE database.





6 proteins are bound to GXYLT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr124248084842480959-3'-UTR,intron-Distal,intron-Proximal4.940085.79762HepG2FUBP3
chr124248109142481160-3'-UTR,intron-Distal4.218664.13513HepG2LIN28B
chr124248086342480940-3'-UTR,intron-Distal,intron-Proximal4.700185.79092K562TARDBP
chr124247916242479264-3'-UTR,intron-Distal3.029453.91588K562UPF1
chr124248083442480932-3'-UTR,intron-Distal,intron-Proximal3.460414.14964K562UPF1
chr124253840542538541-5'-UTR,CDS,intron-Distal,intron-Proximal6.0675627.05373HepG2DDX3X
chr124253854142538627-5'-UTR,intron-Distal,intron-Proximal5.0962917.72880HepG2DDX3X
chr124253829942538405-CDS,intron-Distal5.0253915.25090HepG2DDX3X
chr124253823942538277-CDS,intron-Distal5.627467.49422HepG2DDX3X
chr124251316142513246-intron-Distal4.743304.30178K562PTBP1
chr124251317842513222-intron-Distal4.896107.45191HepG2PTBP1
chr124251322242513240-intron-Distal3.619724.78196HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GXYLT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GXYLT1 is not available on ENCORE database.

  • 99 RBPs can affect the levels of GXYLT1.  








The Knockdown/knockout RNA-Seq assay for GXYLT1 is not available on ENCORE database.





99 RBPs can affect the gene expression of GXYLT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GXYLT1ENSG00000151233.61020.31560784.321300.379402.769801.69580HepG2AATF
GXYLT1ENSG00000151233.61531.346601160.594200.399801.749901.31650HepG2AKAP1
GXYLT1ENSG00000151233.61877.641901402.135700.421206.809605.80860HepG2AUH
GXYLT1ENSG00000151233.6482.071301087.69340-1.174004.792603.55790HepG2BCCIP
GXYLT1ENSG00000151233.62204.989901129.936900.9644018.7410017.39110HepG2BOP1
GXYLT1ENSG00000151233.61045.96970796.098900.393703.595502.20270HepG2BUD13
GXYLT1ENSG00000151233.6816.558801014.31200-0.312902.533201.79350HepG2CALR
GXYLT1ENSG00000151233.62073.595801476.785900.489603.446702.34760HepG2CCAR1
GXYLT1ENSG00000151233.61607.67370912.375400.8172010.943309.49950HepG2CIRBP
GXYLT1ENSG00000151233.6692.436501011.22220-0.546304.420603.61750HepG2CKAP4
GXYLT1ENSG00000151233.6886.26910672.124700.398902.494601.46920HepG2CSTF2
GXYLT1ENSG00000151233.6543.52120802.71920-0.562603.556301.94150HepG2CSTF2T
GXYLT1ENSG00000151233.61694.739701308.343700.373204.938904.12510HepG2CELF1
GXYLT1ENSG00000151233.61035.456101406.85760-0.442207.915906.75750HepG2DAZAP1
GXYLT1ENSG00000151233.61549.90020866.130000.8394010.442609.21840HepG2DDX21
GXYLT1ENSG00000151233.61676.987101111.863200.592805.859404.98150HepG2DDX3X
GXYLT1ENSG00000151233.61051.34930818.896800.360402.623101.35750HepG2DDX47
GXYLT1ENSG00000151233.6760.45930938.71340-0.303802.644501.95320HepG2DNAJC21
GXYLT1ENSG00000151233.6505.19830930.36350-0.8809020.2747018.66330HepG2DNAJC2
GXYLT1ENSG00000151233.6696.71130918.18130-0.398201.857801.35990HepG2EIF2S1
GXYLT1ENSG00000151233.6858.12120639.644500.423802.128101.32660HepG2EIF3D
GXYLT1ENSG00000151233.61758.90610987.843500.832207.760006.63840HepG2EIF4B
GXYLT1ENSG00000151233.61178.235501387.89370-0.236302.354901.57200HepG2EIF4G1
GXYLT1ENSG00000151233.61998.749201609.819500.312103.984403.28540HepG2ETF1
GXYLT1ENSG00000151233.6997.29240479.775601.0556017.7970015.89680HepG2FUBP3
GXYLT1ENSG00000151233.61808.796201103.031600.713505.793704.22420HepG2FUS
GXYLT1ENSG00000151233.6765.032801023.55580-0.420002.368701.72610HepG2FXR1
GXYLT1ENSG00000151233.6621.703501007.96910-0.697204.923403.72470HepG2G3BP2
GXYLT1ENSG00000151233.6325.18920947.70590-1.5432030.5588028.84160HepG2HNRNPA1
GXYLT1ENSG00000151233.6319.52590739.90840-1.2114013.047209.99140HepG2HNRNPAB
GXYLT1ENSG00000151233.61511.20860961.210600.652707.763706.63870HepG2HNRNPK
GXYLT1ENSG00000151233.61509.006001281.560000.235602.806602.12870HepG2HNRNPL
GXYLT1ENSG00000151233.6532.564001122.20950-1.0753015.5020014.17870HepG2HNRNPLL
GXYLT1ENSG00000151233.6455.55970902.67620-0.986606.515104.66080HepG2HSPD1
GXYLT1ENSG00000151233.6715.324001051.26460-0.555503.883303.03700HepG2IGF2BP1
GXYLT1ENSG00000151233.62088.58520965.395501.1132014.5276013.11880HepG2IGF2BP2
GXYLT1ENSG00000151233.62162.66970905.719501.255602.266401.38290HepG2IGF2BP3
GXYLT1ENSG00000151233.6414.18180853.81260-1.0437011.094908.60170HepG2KHDRBS1
GXYLT1ENSG00000151233.61643.00730970.901000.758807.077405.38990HepG2KHSRP
GXYLT1ENSG00000151233.6370.39420924.52380-1.3196014.2858012.20390HepG2KIF1C
GXYLT1ENSG00000151233.62075.806601558.332100.413602.672501.85630HepG2LARP4
GXYLT1ENSG00000151233.6586.262301010.62290-0.785604.095502.62130HepG2LIN28B
GXYLT1ENSG00000151233.6737.959101023.91160-0.472502.580301.94560HepG2MAGOH
GXYLT1ENSG00000151233.6487.98250815.07020-0.740103.793401.91930HepG2MARK2
GXYLT1ENSG00000151233.61127.184701395.03360-0.307602.912502.13020HepG2NOL12
GXYLT1ENSG00000151233.6326.10190981.44110-1.589608.441806.48970HepG2NONO
GXYLT1ENSG00000151233.6649.04750995.04350-0.616405.908804.84070HepG2NSUN2
GXYLT1ENSG00000151233.61662.65860938.867500.824409.614108.28810HepG2PABPC4
GXYLT1ENSG00000151233.6333.64370817.24730-1.2925029.7880028.15780HepG2PCBP1
GXYLT1ENSG00000151233.61481.613601044.208100.504702.957901.88550HepG2PCBP2
GXYLT1ENSG00000151233.6340.41050650.58620-0.9345014.5611013.00660HepG2PRPF4
GXYLT1ENSG00000151233.6742.516901097.74730-0.564103.309201.98320HepG2PRPF6
GXYLT1ENSG00000151233.6415.877701098.53640-1.401407.273304.48110HepG2PSIP1
GXYLT1ENSG00000151233.61133.72240831.574200.447106.005605.26230HepG2PTBP1
GXYLT1ENSG00000151233.61111.812501413.59720-0.346505.439604.66580HepG2PUM1
GXYLT1ENSG00000151233.6590.40680900.62700-0.609207.366906.42050HepG2QKI
GXYLT1ENSG00000151233.62043.895701007.765501.020108.456407.26660HepG2RAVER1
GXYLT1ENSG00000151233.61565.096601345.515400.218001.779801.34030HepG2RBM22
GXYLT1ENSG00000151233.6633.451201004.63990-0.665404.318401.75970HepG2RBM34
GXYLT1ENSG00000151233.61113.89850861.938300.369904.109503.37740HepG2RECQL
GXYLT1ENSG00000151233.61417.37190989.786000.517902.997002.01570HepG2RPS10
GXYLT1ENSG00000151233.6468.07060816.56610-0.802802.688901.91160HepG2RRP9
GXYLT1ENSG00000151233.61800.211001096.197500.715605.260703.14680HepG2RTF1
GXYLT1ENSG00000151233.6717.36730932.55380-0.378504.039103.28600HepG2SAFB2
GXYLT1ENSG00000151233.62091.641901287.416900.700106.044805.02480HepG2SF3A3
GXYLT1ENSG00000151233.6789.705601110.77360-0.492204.466803.58750HepG2SF3B1
GXYLT1ENSG00000151233.61475.45190865.785800.7690017.1114015.83160HepG2SF3B4
GXYLT1ENSG00000151233.6854.937801087.53540-0.347204.547703.75890HepG2SMN1
GXYLT1ENSG00000151233.6410.723101027.10750-1.3223016.3211013.94910HepG2SMNDC1
GXYLT1ENSG00000151233.62865.076201235.927601.212908.114206.77700HepG2SNRNP70
GXYLT1ENSG00000151233.61735.484701519.717400.191402.071401.61800HepG2SRFBP1
GXYLT1ENSG00000151233.62160.21500903.689001.2572052.0862050.60600HepG2SRSF1
GXYLT1ENSG00000151233.61842.556601314.797000.486808.839307.80320HepG2SRSF5
GXYLT1ENSG00000151233.61317.49240735.195700.8415021.1946019.93080HepG2SRSF9
GXYLT1ENSG00000151233.6550.50130782.56960-0.507503.102101.93360HepG2STIP1
GXYLT1ENSG00000151233.61357.80860941.759100.527803.109301.82760HepG2SUB1
GXYLT1ENSG00000151233.6528.340001495.30890-1.5009063.8895061.64590HepG2SUCLG1
GXYLT1ENSG00000151233.61497.794701064.654800.492403.184602.46490HepG2SUPV3L1
GXYLT1ENSG00000151233.61791.88140812.259901.1414033.9597032.27700HepG2TAF15
GXYLT1ENSG00000151233.6549.182501093.77080-0.9940014.5825013.12880HepG2TARDBP
GXYLT1ENSG00000151233.6594.45660746.36790-0.328302.327201.55800HepG2TIA1
GXYLT1ENSG00000151233.61804.577701017.586900.826405.880705.20320HepG2TIAL1
GXYLT1ENSG00000151233.6214.949401026.60220-2.2558088.7561086.19650HepG2TRIM56
GXYLT1ENSG00000151233.61504.838701141.740300.398303.737002.94460HepG2UPF1
GXYLT1ENSG00000151233.6730.575601102.30790-0.593409.822308.80500HepG2UTP3
GXYLT1ENSG00000151233.61529.05070990.847800.625804.385402.79320HepG2XRCC5
GXYLT1ENSG00000151233.6797.46700642.050800.312602.907102.22150HepG2ZC3H8
GXYLT1ENSG00000151233.6614.05190392.682400.644905.648603.89310K562AARS
GXYLT1ENSG00000151233.61364.079401027.211100.409103.528002.88130K562AQR
GXYLT1ENSG00000151233.6402.63890557.83140-0.470303.798302.20610K562BCCIP
GXYLT1ENSG00000151233.6692.79780431.275400.683705.842404.56140K562BOP1
GXYLT1ENSG00000151233.6410.11690608.24570-0.568603.576001.90180K562CKAP4
GXYLT1ENSG00000151233.61699.009701413.789900.265002.239501.36190K562CELF1
GXYLT1ENSG00000151233.6715.07870435.542000.715205.181903.70720K562EIF3D
GXYLT1ENSG00000151233.6433.90360557.15150-0.360702.298701.56930K562EIF3G
GXYLT1ENSG00000151233.6460.62630587.41290-0.350802.046401.31360K562FIP1L1
GXYLT1ENSG00000151233.6660.22990492.579500.422503.329601.84230K562FUS
GXYLT1ENSG00000151233.6923.97000587.722800.652603.286102.50300K562G3BP2
GXYLT1ENSG00000151233.6494.21960860.66930-0.800309.628608.19250K562GRSF1
GXYLT1ENSG00000151233.6428.81160936.63790-1.127103.900202.01010K562HNRNPAB
GXYLT1ENSG00000151233.6630.67130796.42910-0.336702.182401.47330K562HSPD1
GXYLT1ENSG00000151233.6288.88040435.80630-0.593203.151701.57020K562LIN28B
GXYLT1ENSG00000151233.6479.62950798.72740-0.735803.593502.52960K562MATR3
GXYLT1ENSG00000151233.6386.96120666.80730-0.785108.010006.44960K562PPIG
GXYLT1ENSG00000151233.6185.21360385.44300-1.057304.869003.62640K562PSIP1
GXYLT1ENSG00000151233.61340.45770841.775200.671105.428704.70070K562PUS1
GXYLT1ENSG00000151233.6883.43820560.727200.655702.817301.38420K562RAVER1
GXYLT1ENSG00000151233.6975.72230820.201900.250401.885301.37900K562RBM15
GXYLT1ENSG00000151233.6368.91480795.21960-1.108103.859002.21640K562SFPQ
GXYLT1ENSG00000151233.6215.69520333.24460-0.627603.370202.21110K562SRFBP1
GXYLT1ENSG00000151233.6733.032201094.58060-0.578407.115504.88600K562SUCLG1
GXYLT1ENSG00000151233.6897.26420576.907400.637102.760301.30310K562TAF15
GXYLT1ENSG00000151233.6233.37850393.70710-0.754504.538903.25890K562TRIM56
GXYLT1ENSG00000151233.6841.45410569.534700.563003.825002.49730K562U2AF1
GXYLT1ENSG00000151233.6823.43970588.257600.485104.728503.68360K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GXYLT1 is not available on ENCORE database.





1 RBPs can affect the splicing of GXYLT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSGXYLT1ENSG00000151233.6chr12-4249171142491908424917114249183542499619424998710.198000.000000.00002longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GXYLT1 is not avaliable on ENCORE database.