FAM217B

General Information

Gene Name       : FAM217B
Gene ID             : ENSG00000196227.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FAM217B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FAM217BENSG00000196227.108.977.658.31ENCSR000AEF
HepG2FAM217BENSG00000196227.106.2615.3210.79ENCSR985KAT
K562FAM217BENSG00000196227.105.647.426.53ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FAM217B is not avaliable on ENCORE database.



Proteins bound to RNA
  • FAM217B RNA is bound by 2 proteins.  







eCLIP assay for FAM217B is not avaliable on ENCORE database.





2 proteins are bound to FAM217B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr205852224458522313+3'-UTR4.447413.20319K562UPF1
chr205851547858515592+5'-UTR,intron-Distal,intron-Proximal3.691353.70637K562DDX3X
chr205851545158515524+5'-UTR,intron-Distal4.982714.03170HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for FAM217B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FAM217B is not available on ENCORE database.

  • 85 RBPs can affect the levels of FAM217B.  








The Knockdown/knockout RNA-Seq assay for FAM217B is not available on ENCORE database.





85 RBPs can affect the gene expression of FAM217B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FAM217BENSG00000196227.6315.02770896.38720-1.5086040.3343038.24470HepG2AUH
FAM217BENSG00000196227.6444.87180704.62310-0.663503.205702.19680HepG2BCCIP
FAM217BENSG00000196227.6650.73630838.32180-0.365402.436801.87120HepG2BOP1
FAM217BENSG00000196227.61201.69630780.275300.622906.213005.08320HepG2CIRBP
FAM217BENSG00000196227.6644.99900398.283600.695403.851302.94210HepG2CNOT7
FAM217BENSG00000196227.6604.61020769.63260-0.348202.052201.44980HepG2CPSF6
FAM217BENSG00000196227.6290.67790587.16970-1.0144014.5269012.34070HepG2YBX3
FAM217BENSG00000196227.6611.59280497.941700.296502.422701.63660HepG2DDX19B
FAM217BENSG00000196227.6272.28840546.21460-1.0043011.226609.97000HepG2DDX21
FAM217BENSG00000196227.6776.18230534.454000.538205.020903.78250HepG2DDX24
FAM217BENSG00000196227.61289.92520950.858700.439903.272902.59990HepG2DDX3X
FAM217BENSG00000196227.6402.50990692.74530-0.783304.849103.85870HepG2DDX55
FAM217BENSG00000196227.6571.34620873.97190-0.613202.983301.97010HepG2DDX59
FAM217BENSG00000196227.6347.14950816.67990-1.2342014.5279013.25920HepG2DDX6
FAM217BENSG00000196227.6693.27030515.117000.428403.969303.18700HepG2DKC1
FAM217BENSG00000196227.6321.80240576.57690-0.8413010.674709.36880HepG2DNAJC21
FAM217BENSG00000196227.6407.74330571.45600-0.487004.226903.45310HepG2DNAJC2
FAM217BENSG00000196227.6584.49030785.22060-0.425902.625102.04730HepG2EIF2S1
FAM217BENSG00000196227.6346.38720844.83000-1.2863013.2671011.82510HepG2EIF4B
FAM217BENSG00000196227.6448.48900763.75270-0.768004.213303.22050HepG2EIF4G2
FAM217BENSG00000196227.6787.26960615.926400.354002.504201.46530HepG2ESF1
FAM217BENSG00000196227.6775.84880526.083400.560405.441104.26820HepG2EWSR1
FAM217BENSG00000196227.6779.84750582.100400.421802.953302.28740HepG2HNRNPA1
FAM217BENSG00000196227.6326.93510647.46920-0.9858011.088709.77920HepG2HNRNPC
FAM217BENSG00000196227.6611.70530762.11050-0.317202.904202.17080HepG2HNRNPF
FAM217BENSG00000196227.6521.61940736.38680-0.497503.450002.70480HepG2HNRNPL
FAM217BENSG00000196227.6586.71010750.45610-0.355102.822002.09010HepG2IGF2BP1
FAM217BENSG00000196227.61102.24030825.587300.416802.959502.26520HepG2IGF2BP2
FAM217BENSG00000196227.6745.99620530.219100.492502.533101.34880HepG2KRR1
FAM217BENSG00000196227.6864.97590567.910800.606905.184302.91960HepG2LSM11
FAM217BENSG00000196227.6657.29460448.672300.550802.375501.39730HepG2METAP2
FAM217BENSG00000196227.6250.19670581.19430-1.2160011.5994010.06060HepG2MSI2
FAM217BENSG00000196227.6649.71370901.41600-0.472403.147502.47430HepG2NCBP2
FAM217BENSG00000196227.6526.83220796.34570-0.596104.826504.06040HepG2PCBP1
FAM217BENSG00000196227.6207.33680357.10810-0.784404.022002.18380HepG2PNPT1
FAM217BENSG00000196227.6228.94390531.63890-1.2155019.5229017.79300HepG2PRPF4
FAM217BENSG00000196227.6458.18520810.24340-0.822406.368205.60540HepG2PTBP1
FAM217BENSG00000196227.61140.52280812.057100.489905.132904.37610HepG2PUM1
FAM217BENSG00000196227.6327.58060656.83470-1.003706.233405.19820HepG2RAVER1
FAM217BENSG00000196227.6492.88390740.19180-0.586706.230705.00900HepG2RBM15
FAM217BENSG00000196227.61109.28450860.196900.366803.650603.07740HepG2RBM22
FAM217BENSG00000196227.6306.72250554.23560-0.853606.473604.84910HepG2RCC2
FAM217BENSG00000196227.6365.99220577.02790-0.656804.644002.02600HepG2RPL23A
FAM217BENSG00000196227.6549.53070399.656400.459302.187201.47530HepG2RPS3A
FAM217BENSG00000196227.6370.53150572.79430-0.628407.308506.33290HepG2SAFB2
FAM217BENSG00000196227.6653.52250843.69020-0.368502.366401.81380HepG2SF3B4
FAM217BENSG00000196227.6260.66570669.66690-1.3612014.9811012.70690HepG2SMNDC1
FAM217BENSG00000196227.6779.26920971.56120-0.318202.993802.47920HepG2SRFBP1
FAM217BENSG00000196227.6940.30060755.283000.316002.078601.52660HepG2SRSF5
FAM217BENSG00000196227.6626.40910748.76620-0.257402.113401.49570HepG2SRSF7
FAM217BENSG00000196227.6482.92220716.35580-0.568903.886703.25510HepG2SRSF9
FAM217BENSG00000196227.61172.71460843.546100.475207.075306.32830HepG2SSB
FAM217BENSG00000196227.6567.43020859.04340-0.598304.409203.65880HepG2SUCLG1
FAM217BENSG00000196227.6319.59590484.91030-0.601504.390703.21940HepG2SUPT6H
FAM217BENSG00000196227.6959.00780791.361100.277102.012801.52150HepG2TAF15
FAM217BENSG00000196227.6642.74360811.47470-0.336302.058201.42040HepG2TARDBP
FAM217BENSG00000196227.6826.03790519.294400.669602.798201.72520HepG2TBRG4
FAM217BENSG00000196227.6451.23840625.01540-0.470003.835803.26770HepG2TIAL1
FAM217BENSG00000196227.6359.62450630.56310-0.8101012.0058010.95120HepG2TRIM56
FAM217BENSG00000196227.61111.43680614.185200.8556011.031009.75530HepG2U2AF1
FAM217BENSG00000196227.6308.97610790.91860-1.3560015.1280013.15090HepG2UBE2L3
FAM217BENSG00000196227.6287.10490407.46950-0.505102.461701.74540HepG2UCHL5
FAM217BENSG00000196227.6469.98530678.92100-0.530602.565701.86630HepG2XRN2
FAM217BENSG00000196227.61045.18400792.009700.400105.642004.93280HepG2ZNF622
FAM217BENSG00000196227.6142.99750305.86120-1.096909.474308.50450K562AGGF1
FAM217BENSG00000196227.6539.14990389.667300.468302.764401.89150K562BOP1
FAM217BENSG00000196227.6706.84340453.358000.640603.270102.09900K562CNOT7
FAM217BENSG00000196227.6282.84450505.61270-0.838005.658004.02780K562CPEB4
FAM217BENSG00000196227.6974.01740762.386600.353302.703001.73990K562CELF1
FAM217BENSG00000196227.6236.29630147.977100.675103.153201.71780K562DNAJC21
FAM217BENSG00000196227.6894.36000620.268300.527905.382404.09320K562EIF4G2
FAM217BENSG00000196227.6605.65700421.575000.522603.717502.72270K562FMR1
FAM217BENSG00000196227.6517.07700357.328200.533003.237802.24330K562FTO
FAM217BENSG00000196227.6556.99230255.288801.1254016.2133014.85680K562FXR1
FAM217BENSG00000196227.6467.09390279.039000.743104.808503.81730K562G3BP2
FAM217BENSG00000196227.6470.06460328.001200.519102.792501.64740K562GLRX3
FAM217BENSG00000196227.6537.25640395.570200.441602.778601.98270K562GPKOW
FAM217BENSG00000196227.6949.21060661.189700.521604.651903.18280K562MSI2
FAM217BENSG00000196227.6518.82320344.846100.589205.759304.62120K562MTPAP
FAM217BENSG00000196227.6933.91560678.362800.461103.163601.55750K562NOL12
FAM217BENSG00000196227.6772.38660435.544900.826405.365403.63110K562PABPC1
FAM217BENSG00000196227.6455.29400331.445700.457903.074202.22880K562POLR2G
FAM217BENSG00000196227.6438.39100646.47480-0.560404.590103.49560K562PPIG
FAM217BENSG00000196227.6157.21870255.14550-0.698503.487502.45630K562PSIP1
FAM217BENSG00000196227.61242.27850676.796200.8761013.1020011.31170K562PUF60
FAM217BENSG00000196227.61231.38280719.618900.7749014.0974011.64060K562PUM1
FAM217BENSG00000196227.61030.42360705.349500.546706.613605.11470K562PUM2
FAM217BENSG00000196227.6211.73430315.63280-0.576002.884202.33220K562PUS1
FAM217BENSG00000196227.6113.13920232.72820-1.040506.584705.05380K562RCC2
FAM217BENSG00000196227.6462.73630319.465800.534403.414802.18230K562NELFE
FAM217BENSG00000196227.6451.06840295.345100.610804.348902.98040K562SAFB
FAM217BENSG00000196227.6600.84570332.457000.853708.242206.81660K562SYNCRIP
FAM217BENSG00000196227.6410.99320314.139700.387601.949301.34870K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FAM217B is not available on ENCORE database.






No RBPs affect the alternative splcing events of FAM217B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FAM217B is not avaliable on ENCORE database.