DPH3

General Information

Gene Name       : DPH3
Gene ID             : ENSG00000154813.9
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DPH3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DPH3ENSG00000154813.912.0212.2612.14ENCSR000AEF
HepG2DPH3ENSG00000154813.911.6525.3918.52ENCSR985KAT
K562DPH3ENSG00000154813.926.4226.0526.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DPH3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DPH3 RNA is bound by 3 proteins.  







eCLIP assay for DPH3 is not avaliable on ENCORE database.





3 proteins are bound to DPH3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31630208216302130-3'-UTR,intron-Distal3.684017.42315K562YBX3
chr31630190916302010-3'-UTR,intron-Distal,intron-Proximal3.502867.46319K562IGF2BP1
chr31630632216306446-5'-UTR,CDS,intron-Distal,intron-Proximal4.0976819.80607K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DPH3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DPH3 is not available on ENCORE database.

  • 93 RBPs can affect the levels of DPH3.  








The Knockdown/knockout RNA-Seq assay for DPH3 is not available on ENCORE database.





93 RBPs can affect the gene expression of DPH3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DPH3ENSG00000154813.5987.83060541.054600.8684018.8688017.58510HepG2ACO1
DPH3ENSG00000154813.51379.19560893.572900.626104.637703.97180HepG2AKAP1
DPH3ENSG00000154813.5711.92180461.564400.625104.822203.45930HepG2AKAP8
DPH3ENSG00000154813.5705.24680543.632300.375403.409802.56990HepG2AKAP8L
DPH3ENSG00000154813.51022.50690739.412600.467602.125701.43230HepG2ASCC1
DPH3ENSG00000154813.51029.72800558.201400.8833012.2343011.09750HepG2BOP1
DPH3ENSG00000154813.5778.57490516.414300.592205.984304.90760HepG2CALR
DPH3ENSG00000154813.5720.09320540.980000.412504.443003.63830HepG2CKAP4
DPH3ENSG00000154813.5347.10120512.47920-0.562102.214301.59090HepG2CPSF6
DPH3ENSG00000154813.51147.13800790.837700.536506.050105.16950HepG2CELF1
DPH3ENSG00000154813.5885.53410654.864500.435302.672501.90980HepG2DDX55
DPH3ENSG00000154813.5658.99880480.620300.455303.033901.98140HepG2DDX5
DPH3ENSG00000154813.5524.75440383.428900.452602.126201.31810HepG2EEF2
DPH3ENSG00000154813.5482.99630319.684800.595304.049102.70380HepG2EFTUD2
DPH3ENSG00000154813.5327.54850706.97030-1.109904.684703.92500HepG2EIF2S1
DPH3ENSG00000154813.5465.14810311.282700.579403.624102.59700HepG2EIF3D
DPH3ENSG00000154813.51046.94520838.921400.319503.035302.16520HepG2EIF4G1
DPH3ENSG00000154813.51270.022901011.101600.328803.942603.24620HepG2ETF1
DPH3ENSG00000154813.5670.41830473.941200.500303.924602.59780HepG2FASTKD2
DPH3ENSG00000154813.5848.99960537.694100.658904.988303.98230HepG2FIP1L1
DPH3ENSG00000154813.5266.32170513.31630-0.946703.749502.56340HepG2FTO
DPH3ENSG00000154813.5415.47800277.164100.583903.762602.70210HepG2GEMIN5
DPH3ENSG00000154813.5353.79140580.98950-0.715604.305603.51790HepG2GPKOW
DPH3ENSG00000154813.5850.08910551.051000.625303.223801.71890HepG2HLTF
DPH3ENSG00000154813.5970.88030781.505800.312902.898501.94470HepG2HNRNPA2B1
DPH3ENSG00000154813.5623.53120788.23540-0.338202.806002.08360HepG2HNRNPF
DPH3ENSG00000154813.5482.22980739.91230-0.617602.399701.74720HepG2HNRNPK
DPH3ENSG00000154813.5138.66450570.09170-2.0396027.6739025.92360HepG2HNRNPU
DPH3ENSG00000154813.5711.60670502.641600.501502.951501.67860HepG2HSPD1
DPH3ENSG00000154813.5560.03200776.19340-0.470904.031503.17210HepG2IGF2BP1
DPH3ENSG00000154813.51095.11220743.337100.558902.694602.02690HepG2IGF2BP2
DPH3ENSG00000154813.5379.27920494.61850-0.383103.083602.00900HepG2KIF1C
DPH3ENSG00000154813.5698.93330486.331500.523103.820102.48140HepG2LARP7
DPH3ENSG00000154813.5524.15400325.802300.685903.156102.03110HepG2METAP2
DPH3ENSG00000154813.5622.42270435.227500.516003.963002.99850HepG2MSI2
DPH3ENSG00000154813.5702.96500476.290200.561503.238601.68800HepG2NKRF
DPH3ENSG00000154813.5944.48710602.378000.648803.467902.46630HepG2PABPC1
DPH3ENSG00000154813.5973.57690708.766700.457905.738204.91510HepG2PCBP1
DPH3ENSG00000154813.5813.26970543.987800.580103.371502.22710HepG2PCBP2
DPH3ENSG00000154813.5351.86080508.48130-0.531202.277601.60230HepG2PPIL4
DPH3ENSG00000154813.5840.27930571.846400.555103.047801.77780HepG2PRPF6
DPH3ENSG00000154813.5856.12550721.197200.247301.836101.37270HepG2PTBP1
DPH3ENSG00000154813.5710.29350551.105500.366003.458902.78820HepG2PUS1
DPH3ENSG00000154813.5806.91680524.898300.620303.013002.27980HepG2RAVER1
DPH3ENSG00000154813.5732.40520554.905400.400303.038602.14220HepG2RBM15
DPH3ENSG00000154813.51737.38690845.089201.0396028.4985027.18430HepG2RBM22
DPH3ENSG00000154813.5947.05230708.874500.417803.561702.80360HepG2RBM25
DPH3ENSG00000154813.5397.76700302.869700.393102.052001.51570HepG2RPS19
DPH3ENSG00000154813.5784.06510540.835300.535702.051401.35610HepG2RPS2
DPH3ENSG00000154813.5770.20160499.785000.623804.671203.68020HepG2RRP9
DPH3ENSG00000154813.5386.47050507.70880-0.393602.958902.29800HepG2SAFB2
DPH3ENSG00000154813.5549.68330304.011900.854407.744206.19690HepG2SERBP1
DPH3ENSG00000154813.5237.88830504.08730-1.083403.169901.69210HepG2SF1
DPH3ENSG00000154813.51033.62450548.109600.915108.590907.35030HepG2SF3A3
DPH3ENSG00000154813.5930.20150750.858300.308902.675402.09260HepG2SF3B4
DPH3ENSG00000154813.5534.00870771.77890-0.531306.961105.92950HepG2SLBP
DPH3ENSG00000154813.5825.76020535.532800.624604.205503.00670HepG2SMNDC1
DPH3ENSG00000154813.51695.74730954.489000.8290024.1029023.00290HepG2SRFBP1
DPH3ENSG00000154813.51763.94400783.733901.1703040.9403039.59110HepG2SRSF1
DPH3ENSG00000154813.51032.65820794.737000.377704.150403.41260HepG2SRSF5
DPH3ENSG00000154813.5903.59840637.609700.502906.791105.99470HepG2SRSF9
DPH3ENSG00000154813.51014.26830828.708300.291402.827102.31050HepG2SSB
DPH3ENSG00000154813.5713.15670507.004000.492102.729301.41410HepG2SUGP2
DPH3ENSG00000154813.51132.03300651.924200.796008.030506.97440HepG2SUPV3L1
DPH3ENSG00000154813.5791.80000540.267000.551404.225903.35380HepG2TARDBP
DPH3ENSG00000154813.5735.84150554.058600.409302.713302.21670HepG2TIAL1
DPH3ENSG00000154813.5590.97090459.992500.361401.973301.43310HepG2U2AF1
DPH3ENSG00000154813.51103.69030832.341700.407002.318401.55750HepG2UBE2L3
DPH3ENSG00000154813.5722.88280486.088100.572406.768205.75490HepG2UPF1
DPH3ENSG00000154813.5691.78160499.640600.469304.693403.36650HepG2UTP18
DPH3ENSG00000154813.5826.49280577.310200.517602.912001.82480HepG2XRCC6
DPH3ENSG00000154813.5565.52940409.435900.465904.405203.58840HepG2ZC3H8
DPH3ENSG00000154813.51197.52380534.605701.1634038.8184037.38940HepG2ZNF622
DPH3ENSG00000154813.52756.622001692.289500.703807.122606.25120K562AQR
DPH3ENSG00000154813.5810.255301070.80140-0.402204.455102.72910K562BCCIP
DPH3ENSG00000154813.5705.971201034.79370-0.551708.229506.54180K562BCLAF1
DPH3ENSG00000154813.5492.04540735.21160-0.579405.608104.49950K562CPSF6
DPH3ENSG00000154813.5568.68710785.04520-0.465103.878302.60020K562CSTF2
DPH3ENSG00000154813.5724.38420966.15840-0.415504.450602.88870K562DDX21
DPH3ENSG00000154813.51470.047901221.379100.267302.925402.25640K562DDX47
DPH3ENSG00000154813.5388.04000579.50080-0.578606.176004.34310K562EIF2S1
DPH3ENSG00000154813.51018.352901343.47700-0.399703.723502.91130K562EIF2S2
DPH3ENSG00000154813.5374.83960496.37810-0.405202.941601.74150K562EIF4B
DPH3ENSG00000154813.5560.01580762.83840-0.445903.750602.24200K562EXOSC5
DPH3ENSG00000154813.5429.69700634.02390-0.561203.974902.86390K562FTO
DPH3ENSG00000154813.51280.22210573.218801.1591030.4877028.61950K562FXR1
DPH3ENSG00000154813.51010.53230772.484500.387402.553101.37110K562HNRNPK
DPH3ENSG00000154813.51179.60460846.687800.478303.580902.51020K562HNRNPM
DPH3ENSG00000154813.5347.959701056.98550-1.6030045.3210042.15670K562HNRNPU
DPH3ENSG00000154813.5722.12220967.60020-0.422205.811904.78580K562NSUN2
DPH3ENSG00000154813.51317.30730754.690200.8035010.579709.10440K562PRPF8
DPH3ENSG00000154813.51164.61300789.679800.560406.950705.93430K562PTBP1
DPH3ENSG00000154813.52593.352901982.926100.387103.318502.42670K562PUF60
DPH3ENSG00000154813.51108.85630768.859300.528204.285403.26530K562RPS19
DPH3ENSG00000154813.5589.24300409.597200.524603.097302.03250K562RPS3
DPH3ENSG00000154813.5305.33700419.36320-0.457802.706501.45730K562SLBP
DPH3ENSG00000154813.51449.13500774.129100.9044016.8113015.07430K562SRSF1
DPH3ENSG00000154813.5969.09920746.529200.376303.343202.44100K562SYNCRIP
DPH3ENSG00000154813.5429.90630666.14920-0.631804.486802.37170K562TFIP11
DPH3ENSG00000154813.5570.24580755.77530-0.406403.238802.34320K562TIA1
DPH3ENSG00000154813.5788.03530592.586300.411102.474501.44980K562U2AF1
DPH3ENSG00000154813.5561.37610773.48140-0.462402.816501.78730K562UCHL5
DPH3ENSG00000154813.5649.11150877.88800-0.435603.825102.79110K562WDR3
DPH3ENSG00000154813.51049.08790666.904500.653503.178401.46160K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DPH3 is not available on ENCORE database.





7 RBPs can affect the splicing of DPH3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.171000.000010.00043includedK562SRSF1
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.218000.000100.03400includedHepG2ILF3
SEDPH3ENSG00000154813.5chr3-163056611630573616301416163023361630627516306479-0.241000.000040.00181excludedHepG2HNRNPK
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.254000.000190.05290includedHepG2EFTUD2
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.161000.000770.04246includedK562EFTUD2
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.191000.001050.02662includedHepG2SRSF1
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.209000.000420.04948includedHepG2TAF15
SEDPH3ENSG00000154813.5chr3-163056611630573616301416163023361630627516306479-0.155000.000880.04050excludedK562HNRNPK
SEDPH3ENSG00000154813.5chr3-163056611630573616301416163023361630627516306479-0.256000.000960.04166excludedHepG2HNRNPU
SEDPH3ENSG00000154813.5chr3-1630566116305736163014161630233616306275163064790.144000.006660.08669includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DPH3 is not avaliable on ENCORE database.