CRCP

General Information

Gene Name       : CRCP
Gene ID             : ENSG00000241258.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CRCP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CRCPENSG00000241258.617.2819.8718.58ENCSR000AEF
HepG2CRCPENSG00000241258.614.6016.9515.77ENCSR985KAT
K562CRCPENSG00000241258.632.7039.1935.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CRCP is not avaliable on ENCORE database.



Proteins bound to RNA
  • CRCP RNA is bound by 19 proteins.  







eCLIP assay for CRCP is not avaliable on ENCORE database.





19 proteins are bound to CRCP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76561790665618009+3'-UTR5.6337512.58146HepG2UPF1
chr76561926665619281+3'-UTR5.1309825.03800K562AKAP1
chr76561895265619046+3'-UTR3.673759.20238HepG2AKAP1
chr76561900165619046+3'-UTR5.2290931.61545K562UPF1
chr76561925465619329+3'-UTR5.6910441.55422K562UPF1
chr76561898865619051+3'-UTR5.0292641.25823K562AKAP1
chr76561770665617754+3'-UTR5.4291518.93168K562UPF1
chr76561808665618113+3'-UTR6.1083816.89355K562UPF1
chr76561719365617372+3'-UTR,CDS,intron-Proximal3.077217.92720K562ZNF622
chr76561885365618889+3'-UTR4.068838.49190K562AKAP1
chr76561751065617584+3'-UTR5.2277731.06644K562UPF1
chr76561874765618791+3'-UTR5.8421325.81294K562UPF1
chr76561933565619358+3'-UTR4.3633718.85449K562AKAP1
chr76561935365619390+3'-UTR4.6287420.81067K562UPF1
chr76561890065618938+3'-UTR4.2811815.20799K562UPF1
chr76561889765618988+3'-UTR4.6522038.18761K562AKAP1
chr76561791365618007+3'-UTR5.6492113.62786HepG2AKAP1
chr76561865965618679+3'-UTR4.052323.61011HepG2AKAP1
chr76561894665619001+3'-UTR4.0119623.77224K562UPF1
chr76561792865617978+3'-UTR4.3946418.25546K562UPF1
chr76561891465619028+3'-UTR3.3691415.85276HepG2UPF1
chr76561721165617291+3'-UTR,CDS4.386254.01886HepG2LIN28B
chr76561931565619335+3'-UTR4.6908924.81884K562AKAP1
chr76561800765618097+3'-UTR5.4729710.56976HepG2AKAP1
chr76561865165618688+3'-UTR4.7650313.21862K562AKAP1
chr76561882865618871+3'-UTR5.239969.25213HepG2UPF1
chr76561719865617216+3'-UTR,CDS4.016434.13050K562LIN28B
chr76561928165619315+3'-UTR5.2402450.40036K562AKAP1
chr76561933665619350+3'-UTR4.2693415.61943K562UPF1
chr76561890065618936+3'-UTR3.360664.41670HepG2AKAP1
chr76561042965610480+3'-UTR,CDS,intron-Proximal3.069333.29348K562YBX3
chr76561721665617285+3'-UTR,CDS6.7424432.72146K562LIN28B
chr76561927665619392+3'-UTR3.8937013.48334HepG2AKAP1
chr76561866265618729+3'-UTR4.8711312.37152K562FAM120A
chr76561723465617372+3'-UTR,CDS3.143833.46619K562GRWD1
chr76561770665617769+3'-UTR3.263446.38942K562FAM120A
chr76561769065617770+3'-UTR4.7484813.21726HepG2AKAP1
chr76561848465618541+3'-UTR3.056916.72941K562FAM120A
chr76561750665617623+3'-UTR6.4789822.33527HepG2UPF1
chr76561918565619251+3'-UTR5.380015.64948HepG2UPF1
chr76561768565617753+3'-UTR4.452149.87725HepG2UPF1
chr76561918965619234+3'-UTR4.2319817.09373K562UPF1
chr76561759665617650+3'-UTR5.070138.06720HepG2AKAP1
chr76561865365618747+3'-UTR4.6772036.96345K562UPF1
chr76561872965618791+3'-UTR3.841508.96355K562FAM120A
chr76561720865617399+3'-UTR,CDS3.698836.18214HepG2GRWD1
chr76561743065617483+3'-UTR4.647914.42734K562UCHL5
chr76561925165619317+3'-UTR5.8210912.13480HepG2UPF1
chr76561742265617474+3'-UTR3.519564.53005K562YBX3
chr76561940665619445+3'-UTR5.5891020.44698K562UPF1
chr76561751165617596+3'-UTR4.3885310.09795HepG2AKAP1
chr76561847265618544+3'-UTR5.5084245.88018K562UPF1
chr76557990765579957+5'-UTR,CDS,intron-Distal,intron-Proximal3.024994.75208K562DDX3X
chr76559926565599333+5'-UTR,CDS,intron-Distal,intron-Proximal3.561384.91258K562YBX3
chr76559269165592831+CDS,intron-Distal,intron-Proximal3.997436.80869K562AQR
chr76557995265580016+CDS,intron-Distal,intron-Proximal4.102166.80869K562AQR
chr76558946765589597+intron-Distal3.346536.26469K562PTBP1
chr76558442865584542+intron-Distal3.318714.08043K562HNRNPM
chr76558058365580782+intron-Distal4.708947.47576K562KHSRP
chr76560242665602481+intron-Distal3.779513.23532K562MATR3
chr76560698965607092+intron-Distal4.381964.31720HepG2MATR3
chr76558120865581243+intron-Distal3.995907.56833K562ILF3
chr76558046165580536+intron-Distal3.817923.15816HepG2PRPF4
chr76558947765589596+intron-Distal5.224636.57498HepG2PCBP2
chr76558763565587716+intron-Distal3.953343.06194K562ILF3
chr76560682365606879+intron-Distal4.077193.04224HepG2SUGP2
chr76558118865581208+intron-Distal4.801517.69017K562ILF3
chr76558456865584625+intron-Distal4.227654.53244K562HNRNPM
chr76558119065581245+intron-Distal3.710704.73419HepG2ILF3
chr76560457365604668+intron-Distal5.144337.63393K562HNRNPM
chr76560983065609906+intron-Distal4.939236.79309HepG2ILF3
chr76560456265604666+intron-Distal4.962096.44072HepG2HNRNPM
chr76560002665600143+intron-Distal4.221023.83958HepG2QKI
chr76560455665604648+intron-Distal3.680034.57452HepG2SUGP2
chr76558456965584713+intron-Distal4.721784.31871HepG2HNRNPM
chr76558946865589597+intron-Distal5.114808.39565HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CRCP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CRCP is not available on ENCORE database.

  • 66 RBPs can affect the levels of CRCP.  








The Knockdown/knockout RNA-Seq assay for CRCP is not available on ENCORE database.





66 RBPs can affect the gene expression of CRCP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CRCPENSG00000241258.2458.99380646.45070-0.494105.056804.04590HepG2AKAP8L
CRCPENSG00000241258.21097.63570927.041100.243602.189001.56530HepG2AUH
CRCPENSG00000241258.2851.28610516.930300.719607.732006.79370HepG2BOP1
CRCPENSG00000241258.2531.05470742.63130-0.483802.215701.53650HepG2CNOT7
CRCPENSG00000241258.2773.68350607.089500.349702.447201.41090HepG2CPSF7
CRCPENSG00000241258.2678.90630945.75790-0.478303.411202.72540HepG2DDX3X
CRCPENSG00000241258.2801.01420481.356300.734605.991404.90620HepG2DDX55
CRCPENSG00000241258.2469.00970781.00560-0.735706.559705.67010HepG2EIF2S1
CRCPENSG00000241258.2587.58260840.33450-0.516202.823202.12820HepG2EIF4B
CRCPENSG00000241258.2454.74580628.74970-0.467403.581102.63100HepG2EWSR1
CRCPENSG00000241258.2468.96570602.79110-0.362202.229801.51720HepG2FUBP3
CRCPENSG00000241258.2619.75660870.79720-0.490603.551102.77380HepG2FXR1
CRCPENSG00000241258.2589.47030807.82170-0.454602.902602.22160HepG2G3BP1
CRCPENSG00000241258.2476.62700588.16380-0.303402.387301.43920HepG2KIF1C
CRCPENSG00000241258.2397.49990555.37870-0.482503.437402.07700HepG2LIN28B
CRCPENSG00000241258.2692.95140896.62740-0.371802.148001.58680HepG2NCBP2
CRCPENSG00000241258.2423.33800543.63690-0.360802.578401.86560HepG2PPIL4
CRCPENSG00000241258.2857.18270667.916300.359803.589402.71850HepG2PRPF4
CRCPENSG00000241258.2639.10750808.72640-0.339603.146402.57050HepG2PTBP1
CRCPENSG00000241258.2663.90440798.83190-0.266902.439701.87600HepG2PUM1
CRCPENSG00000241258.2496.61180655.32180-0.400103.856103.15210HepG2PUS1
CRCPENSG00000241258.2688.70470875.93630-0.346902.917002.27840HepG2QKI
CRCPENSG00000241258.21160.88330889.582900.383904.330503.72030HepG2RBM22
CRCPENSG00000241258.2588.12870900.06050-0.613908.394207.54420HepG2NELFE
CRCPENSG00000241258.2687.89370838.23760-0.285202.393601.81500HepG2RECQL
CRCPENSG00000241258.21410.29480775.441200.8628013.3332012.03730HepG2RPLP0
CRCPENSG00000241258.2563.48850745.49480-0.403801.980601.30380HepG2RPS3A
CRCPENSG00000241258.2491.36330367.378800.419402.073601.38400HepG2RRP9
CRCPENSG00000241258.21170.55790666.927600.811507.261006.13160HepG2SF3A3
CRCPENSG00000241258.2797.14480565.396300.495502.355001.63660HepG2SNRNP70
CRCPENSG00000241258.21577.352301004.769400.6505014.8278013.91260HepG2SRFBP1
CRCPENSG00000241258.2958.63120707.250800.438705.506504.58090HepG2SRSF7
CRCPENSG00000241258.2884.32640715.003500.306502.811902.25710HepG2SRSF9
CRCPENSG00000241258.2713.64110872.40970-0.289802.503302.01040HepG2SSB
CRCPENSG00000241258.2647.85910789.91710-0.286002.201601.69140HepG2TAF15
CRCPENSG00000241258.2759.80920592.325000.359102.814502.31050HepG2TIAL1
CRCPENSG00000241258.21057.79050636.743100.732207.923606.86470HepG2U2AF1
CRCPENSG00000241258.21020.06830507.811901.006203.127602.07710HepG2U2AF2
CRCPENSG00000241258.2898.93430571.034100.654509.889608.86880HepG2UTP3
CRCPENSG00000241258.2812.96710659.148200.302502.810002.13370HepG2ZC3H8
CRCPENSG00000241258.2898.30170650.495900.465606.588105.83910HepG2ZNF622
CRCPENSG00000241258.21020.566701256.77740-0.300403.187402.58560K562AGGF1
CRCPENSG00000241258.21014.861601274.24960-0.328403.426701.93090K562BCCIP
CRCPENSG00000241258.21042.281301231.40470-0.240602.333801.45430K562BCLAF1
CRCPENSG00000241258.22464.198701732.266200.508408.103907.06620K562DDX47
CRCPENSG00000241258.21447.620901081.225100.420902.799701.75690K562EIF3D
CRCPENSG00000241258.21337.59290912.468200.551707.535006.23060K562EIF3G
CRCPENSG00000241258.21208.40800856.363800.496704.806503.72370K562EIF4A3
CRCPENSG00000241258.21795.812802172.95570-0.275002.675501.75040K562EIF4G2
CRCPENSG00000241258.21358.04370890.576000.6086010.096309.02430K562FXR1
CRCPENSG00000241258.2839.398801058.77030-0.335002.463301.35670K562IGF2BP3
CRCPENSG00000241258.21411.682701093.911900.367803.462902.51660K562MAGOH
CRCPENSG00000241258.21283.845701521.10600-0.244603.215302.41600K562NSUN2
CRCPENSG00000241258.21349.31860973.289300.471204.687503.40650K562PCBP2
CRCPENSG00000241258.21043.334101767.13380-0.760209.186307.67570K562PCBP3
CRCPENSG00000241258.2823.192701355.45160-0.7195011.432909.86060K562POLR2G
CRCPENSG00000241258.21207.74160982.521400.297702.007001.36240K562PRPF8
CRCPENSG00000241258.21691.498801062.812700.6703010.852809.59950K562PTBP1
CRCPENSG00000241258.23187.786002370.889200.427004.436803.41030K562PUF60
CRCPENSG00000241258.22041.473002521.59590-0.304702.963201.85480K562PUM1
CRCPENSG00000241258.21946.407401296.995000.585506.435505.64680K562PUS1
CRCPENSG00000241258.21572.758801263.647500.315603.178802.55040K562RBM15
CRCPENSG00000241258.21370.149001019.046400.427003.908202.89680K562RBM22
CRCPENSG00000241258.21674.427401000.934600.742208.336006.90500K562RPS19
CRCPENSG00000241258.21309.630201001.774100.386502.706001.71430K562RPS3
CRCPENSG00000241258.21523.92610834.364300.868903.818502.33960K562SF1
CRCPENSG00000241258.21794.333501500.945300.257502.567501.78030K562SF3A3
CRCPENSG00000241258.21549.115801041.923900.572107.611406.44620K562SRSF1
CRCPENSG00000241258.21646.227801359.553600.275902.485301.70900K562SYNCRIP
CRCPENSG00000241258.21315.119301054.466600.318602.222301.58430K562TARDBP
CRCPENSG00000241258.21391.701701612.86100-0.212802.293201.63520K562UPF1
CRCPENSG00000241258.21882.638301072.757000.811304.853502.60430K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CRCP is not available on ENCORE database.





5 RBPs can affect the splicing of CRCP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECRCPENSG00000241258.2chr7+656104296561048765579827655799576561719465618276-0.208000.002630.05764excludedK562AGGF1
SECRCPENSG00000241258.2chr7+655957306559582965579590655799576559926665599361-0.094000.002270.07497excludedK562SF3B1
MXECRCPENSG00000241258.2chr7+6559269065592727655957306559582965579591655799576559926665599361-0.150000.003110.049792includedK562HNRNPC
MXECRCPENSG00000241258.2chr7+6559269065592727655992666559936165579836655799576561042965610487-0.169000.000010.001042includedK562PPIL4
MXECRCPENSG00000241258.2chr7+65592690655927276559926665599361655798366557995765610429656104870.173000.001180.091441includedK562EWSR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CRCP is not avaliable on ENCORE database.