CCT6P3

General Information

Gene Name       : CCT6P3
Gene ID             : ENSG00000234585.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CCT6P3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CCT6P3ENSG00000234585.63.152.322.73ENCSR000AEF
HepG2CCT6P3ENSG00000234585.62.744.943.84ENCSR985KAT
K562CCT6P3ENSG00000234585.63.073.273.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CCT6P3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CCT6P3 RNA is bound by 25 proteins.  







eCLIP assay for CCT6P3 is not avaliable on ENCORE database.





25 proteins are bound to CCT6P3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr76449921864499386+intron-Distal3.6819713.05391K562AKAP8L
chr76449921064499274+intron-Distal4.9847918.34101HepG2CSTF2T
chr76449931264499373+intron-Distal3.7312811.59191HepG2GTF2F1
chr76449922264499257+intron-Distal4.775174.97583HepG2GTF2F1
chr76449919364499279+intron-Distal4.1588413.05353HepG2PRPF4
chr76449920864499319+intron-Distal4.4928017.77261K562DROSHA
chr76452646064526471+intron-Distal5.31485400.00000HepG2DKC1
chr76450626164506394+intron-Distal3.257983.32889K562MATR3
chr76449917764499308+intron-Distal7.7930050.05368HepG2FAM120A
chr76449947464499516+intron-Distal3.958616.64517HepG2FAM120A
chr76449929864499385+intron-Distal3.861245.36345K562EWSR1
chr76451364364513729+intron-Distal3.338824.08064K562KHSRP
chr76449932064499403+intron-Distal5.228788.84364HepG2DROSHA
chr76452257764522704+intron-Distal3.497575.53392K562SAFB2
chr76449931864499375+intron-Distal3.204714.08069HepG2XRN2
chr76449932564499378+intron-Distal4.315698.59703HepG2PRPF4
chr76449980964499924+intron-Distal4.117518.55611K562KHSRP
chr76449931764499409+intron-Distal6.0888939.58846K562CSTF2T
chr76452642764526444+intron-Distal5.37547400.00000HepG2DKC1
chr76450624664506303+intron-Distal4.7383819.70659HepG2PTBP1
chr76449931964499375+intron-Distal4.2179310.55421K562DROSHA
chr76449924664499317+intron-Distal4.187936.90140HepG2DROSHA
chr76449944364499546+intron-Distal3.495256.51221K562EWSR1
chr76449945264499533+intron-Distal4.9001614.01912HepG2GTF2F1
chr76449920564499383+intron-Distal5.8662642.57317K562GTF2F1
chr76449931064499381+intron-Distal4.4731027.83141HepG2FAM120A
chr76449936964499450+intron-Distal4.604975.02084HepG2HNRNPM
chr76450612764506225+intron-Distal3.139453.66058HepG2QKI
chr76452644664526460+intron-Distal5.22711400.00000HepG2DKC1
chr76449919364499286+intron-Distal4.038398.89133K562FASTKD2
chr76452641064526416+intron-Distal5.10867400.00000HepG2DKC1
chr76449924664499317+intron-Distal5.1032528.73958K562CSTF2T
chr76449927464499301+intron-Distal5.3476616.84592HepG2CSTF2T
chr76449926764499312+intron-Distal4.0994410.18977HepG2GTF2F1
chr76449992464500006+intron-Distal3.044973.51696K562KHSRP
chr76452648264526491+intron-Distal3.94688400.00000HepG2DKC1
chr76452639364526410+intron-Distal5.22823400.00000HepG2DKC1
chr76449919464499292+intron-Distal4.086435.14745HepG2XRN2
chr76449930164499386+intron-Distal5.2699229.97245HepG2CSTF2T
chr76449921964499291+intron-Distal3.636053.43567HepG2SLTM
chr76449947364499548+intron-Distal3.949007.87052K562GTF2F1
chr76450630364506365+intron-Distal3.8919519.79634HepG2PTBP1
chr76449930764499375+intron-Distal4.308433.85435K562PRPF8
chr76449922664499298+intron-Distal4.077726.09610K562EWSR1
chr76449945364499524+intron-Distal4.0919111.90884HepG2CSTF2T
chr76449924764499372+intron-Distal3.4599212.32496HepG2EFTUD2
chr76450624464506309+intron-Distal4.174805.02233K562PTBP1
chr76449923564499300+intron-Distal4.838573.77881HepG2PCBP2
chr76449908264499127+intron-Distal4.025243.25786HepG2FAM120A
chr76449945064499562+intron-Distal3.9547218.88127K562CSTF2T
chr76449926764499373+intron-Distal4.903508.21878K562FAM120A
chr76449940264499453+intron-Distal4.2987110.29749HepG2CSTF2T
chr76450630964506376+intron-Distal5.5246014.54239K562PTBP1
chr76449931964499376+intron-Distal3.951144.35255HepG2PCBP2
chr76449925364499390+intron-Distal3.218097.28380HepG2FASTKD2
chr76449927964499325+intron-Distal6.1306014.38130HepG2PRPF4
chr76449951264499586+intron-Distal4.317784.84226K562NONO
chr76449896164498988+intron-Proximal4.158836.26465HepG2CSTF2T
chr76452738464527442+intron-Proximal3.250265.91405HepG2BCLAF1
chr76453080764530864+intron-Proximal4.261503.16051HepG2PPIG
chr76449890764498994+intron-Proximal4.184883.31283K562PRPF8
chr76453081164530863+intron-Proximal3.630116.67313HepG2BCLAF1
chr76452743664527474+intron-Proximal5.001074.13847K562AQR
chr76453128364531338+intron-Proximal3.903394.96634HepG2PPIG
chr76453126864531339+intron-Proximal3.643893.76090HepG2U2AF2
chr76449890364498995+intron-Proximal4.257909.39957HepG2PRPF8
chr76453126864531339+intron-Proximal3.384594.68978K562U2AF2
chr76449895264499013+intron-Proximal3.249474.88776HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CCT6P3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CCT6P3 is not available on ENCORE database.

  • 67 RBPs can affect the levels of CCT6P3.  








The Knockdown/knockout RNA-Seq assay for CCT6P3 is not available on ENCORE database.





67 RBPs can affect the gene expression of CCT6P3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CCT6P3ENSG00000234585.2171.02060242.75320-0.505302.704702.10320HepG2ACO1
CCT6P3ENSG00000234585.299.52220378.55060-1.9274018.9779017.71370HepG2AKAP1
CCT6P3ENSG00000234585.2167.59570243.92260-0.541402.943902.15400HepG2AKAP8L
CCT6P3ENSG00000234585.2212.80560313.21700-0.557602.673501.90190HepG2ASCC1
CCT6P3ENSG00000234585.2181.71030109.861400.725903.064202.43780HepG2BOP1
CCT6P3ENSG00000234585.2152.65650297.57830-0.963006.188505.05990HepG2CIRBP
CCT6P3ENSG00000234585.2159.31460224.52790-0.495002.649401.83130HepG2DDX19B
CCT6P3ENSG00000234585.2128.74020190.33390-0.564102.203201.59070HepG2DDX21
CCT6P3ENSG00000234585.2222.86760362.61890-0.702304.130503.37870HepG2DDX3X
CCT6P3ENSG00000234585.2224.60100311.50650-0.471901.911401.38880HepG2DDX6
CCT6P3ENSG00000234585.2230.53530156.980000.554302.524501.58720HepG2DHX30
CCT6P3ENSG00000234585.2138.59730232.25800-0.744804.301403.49260HepG2DKC1
CCT6P3ENSG00000234585.2206.74440330.92230-0.678603.487002.77130HepG2EIF4A3
CCT6P3ENSG00000234585.2669.49470404.178100.728009.245607.88770HepG2EIF4G1
CCT6P3ENSG00000234585.2237.02740333.90040-0.494402.293901.66120HepG2FXR1
CCT6P3ENSG00000234585.2224.79030328.83210-0.548802.706301.82660HepG2G3BP2
CCT6P3ENSG00000234585.2284.89270426.49010-0.582102.781001.66620HepG2GRSF1
CCT6P3ENSG00000234585.2453.94640316.675700.519402.445401.51390HepG2KHSRP
CCT6P3ENSG00000234585.2144.74150335.88420-1.214508.800407.72700HepG2MATR3
CCT6P3ENSG00000234585.2226.03770343.79440-0.605003.097402.42980HepG2NCBP2
CCT6P3ENSG00000234585.2227.14990387.80060-0.771705.892705.06720HepG2PUF60
CCT6P3ENSG00000234585.2305.50760411.66250-0.430303.206802.57940HepG2PUM1
CCT6P3ENSG00000234585.2448.13240310.275300.530303.785403.07110HepG2QKI
CCT6P3ENSG00000234585.2400.62630281.624400.508403.319902.58700HepG2RBM25
CCT6P3ENSG00000234585.2178.99500318.88540-0.833103.196002.62310HepG2NELFE
CCT6P3ENSG00000234585.265.52760123.40010-0.913203.259802.59950HepG2RPS19
CCT6P3ENSG00000234585.284.18880186.96580-1.151102.729401.39030HepG2SF1
CCT6P3ENSG00000234585.2180.03030311.36880-0.790404.001003.45840HepG2SRSF1
CCT6P3ENSG00000234585.2273.86500382.89070-0.483503.285302.61310HepG2SRSF5
CCT6P3ENSG00000234585.2190.09090133.898200.505502.133401.51280HepG2SRSF7
CCT6P3ENSG00000234585.2291.57320183.180600.670502.593601.43230HepG2SUB1
CCT6P3ENSG00000234585.2294.25430435.45730-0.565504.913204.12550HepG2SUCLG1
CCT6P3ENSG00000234585.2455.89890257.152200.826008.548407.09120HepG2TIA1
CCT6P3ENSG00000234585.2291.63430163.104300.838305.047604.21360HepG2U2AF1
CCT6P3ENSG00000234585.2236.7388096.916001.288409.199307.81590HepG2UCHL5
CCT6P3ENSG00000234585.2143.14400235.86950-0.720504.510003.65410HepG2UPF1
CCT6P3ENSG00000234585.2254.86450150.221600.762502.934901.90150HepG2UPF2
CCT6P3ENSG00000234585.2140.62320227.72340-0.695403.676303.00240HepG2UTP3
CCT6P3ENSG00000234585.2125.60160215.53240-0.779103.302902.14200HepG2XRCC6
CCT6P3ENSG00000234585.2560.72070282.586700.9885013.7018012.54130K562AGGF1
CCT6P3ENSG00000234585.2461.94930310.513600.573003.602102.44400K562AKAP8
CCT6P3ENSG00000234585.2557.39100294.042700.922609.871308.53950K562AKAP8L
CCT6P3ENSG00000234585.2960.94730333.076501.5285026.6846025.06000K562AQR
CCT6P3ENSG00000234585.2442.05050308.518600.518803.963802.85260K562ATP5C1
CCT6P3ENSG00000234585.2455.16880337.711800.430502.574901.44830K562CCDC124
CCT6P3ENSG00000234585.2241.17140155.594700.632202.637201.39140K562EEF2
CCT6P3ENSG00000234585.2239.84760150.339700.673803.260602.26380K562EFTUD2
CCT6P3ENSG00000234585.2149.76380215.99700-0.528302.156101.44700K562EIF3G
CCT6P3ENSG00000234585.2179.98260255.35380-0.504602.706201.57180K562EIF4B
CCT6P3ENSG00000234585.2193.69050294.87470-0.606303.680302.99800K562FXR1
CCT6P3ENSG00000234585.2417.40320219.999300.923803.890202.36300K562HNRNPA2B1
CCT6P3ENSG00000234585.2249.60230152.925400.706703.609202.93890K562HNRNPC
CCT6P3ENSG00000234585.2606.05900312.058400.9575010.733608.79810K562KIF1C
CCT6P3ENSG00000234585.2423.36090298.712100.503002.675501.62170K562MAK16
CCT6P3ENSG00000234585.2592.85420245.032201.274604.974303.67900K562NAA15
CCT6P3ENSG00000234585.2244.11600177.203100.462102.178101.50830K562NSUN2
CCT6P3ENSG00000234585.2329.97570192.419100.778002.679801.70840K562PABPN1
CCT6P3ENSG00000234585.2352.48950254.672800.468802.406001.49600K562PCBP2
CCT6P3ENSG00000234585.2237.26470146.297600.697503.134502.33570K562PRPF8
CCT6P3ENSG00000234585.2161.09390278.05520-0.787505.547504.63480K562PTBP1
CCT6P3ENSG00000234585.2575.81360422.762100.445703.105101.97330K562PUM1
CCT6P3ENSG00000234585.2870.75490291.621101.5781027.5729025.84740K562PUS1
CCT6P3ENSG00000234585.2538.58090284.131400.9225011.037809.87510K562RBM15
CCT6P3ENSG00000234585.2128.36740227.62370-0.826402.254001.36050K562RPS3
CCT6P3ENSG00000234585.2312.58230175.961800.828902.613601.45940K562SF1
CCT6P3ENSG00000234585.2276.75710174.822900.662604.216803.22470K562SF3A3
CCT6P3ENSG00000234585.2430.41710202.097501.090604.880303.10270K562SNRNP200
CCT6P3ENSG00000234585.2117.46270219.82020-0.904102.436901.45870K562SRSF4
CCT6P3ENSG00000234585.2370.97190272.980500.442402.525601.75820K562U2AF2
CCT6P3ENSG00000234585.2274.19310187.890500.545203.135502.37290K562UPF1
CCT6P3ENSG00000234585.2601.99380295.661801.025704.232502.51410K562UTP18
CCT6P3ENSG00000234585.2236.62950160.774700.557502.089801.33060K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CCT6P3 is not available on ENCORE database.





2 RBPs can affect the splicing of CCT6P3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECCT6P3ENSG00000234585.2chr7+6453252264532625645312866453142064533818645338920.161000.000590.03986includedHepG2RBM22
A3SSCCT6P3ENSG00000234585.2chr7+6452658564526804645266306452680464525351645255110.113000.011230.05836longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CCT6P3 is not avaliable on ENCORE database.