CASC3

General Information

Gene Name       : CASC3
Gene ID             : ENSG00000108349.16
Essential Gene : Yes

Functions

Localization(RBPImage: CASC3)

Domains (AlphaFold: CASC3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CASC3ENSG00000108349.1637.6935.6936.69ENCSR000AEF
HepG2CASC3ENSG00000108349.1633.0743.8838.48ENCSR985KAT
K562CASC3ENSG00000108349.1640.8143.7842.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
CASC3HepG2shRNABGHLV31-19,BGHLV31-20BGHLV31-1,BGHLV31-2need discuss the position of band,need discuss the position of bandNotSatisfiedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    CASC3: Click to RBP Image Database
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








    RNA Targets

    • eCLIP assay for CASC3 is not avaliable on ENCORE database.



    Proteins bound to RNA
    • CASC3 RNA is bound by 37 proteins.  







    eCLIP assay for CASC3 is not avaliable on ENCORE database.





    37 proteins are bound to CASC3 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr173832715838327228+3'-UTR3.2077811.05823K562TIA1
    chr173832709738327154+3'-UTR3.127335.01244HepG2TIAL1
    chr173832831138328373+3'-UTR3.039503.97864K562NOLC1
    chr173832805438328119+3'-UTR4.002404.09643HepG2YBX3
    chr173832709438327232+3'-UTR4.5371111.31667HepG2UPF1
    chr173832710338327163+3'-UTR5.7932512.92450HepG2TIA1
    chr173832729138327352+3'-UTR3.295914.21828HepG2TIAL1
    chr173832833038328399+3'-UTR5.183246.79172K562ZC3H11A
    chr173832373838323801+3'-UTR,CDS,intron-Proximal3.7371910.60120K562U2AF1
    chr173832664738326726+3'-UTR,intron-Proximal3.021534.98322HepG2AQR
    chr173832787438327896+3'-UTR3.207157.86167K562YBX3
    chr173832805238328089+3'-UTR3.725677.13820K562UPF1
    chr173832831038328402+3'-UTR4.3510915.61943K562UPF1
    chr173832304538323096+3'-UTR,CDS,intron-Proximal3.663254.70460K562DDX24
    chr173832710738327158+3'-UTR5.0221434.83647K562TIA1
    chr173832727438327356+3'-UTR3.125183.39468K562DDX6
    chr173832444038324519+3'-UTR,CDS,intron-Proximal3.0619710.83230K562U2AF1
    chr173832444338324522+3'-UTR,CDS,intron-Proximal3.2739517.07386HepG2U2AF2
    chr173832818538328283+3'-UTR3.6776510.16051K562UPF1
    chr173832374138323802+3'-UTR,CDS,intron-Proximal3.1372010.62055K562U2AF2
    chr173832447338324567+3'-UTR,CDS4.211537.20098K562IGF2BP2
    chr173832817738328280+3'-UTR5.009527.65023K562NOLC1
    chr173832385838323934+3'-UTR,CDS,intron-Proximal3.763825.73990HepG2PRPF8
    chr173832772638327763+3'-UTR4.141393.19904K562TIA1
    chr173832373938323793+3'-UTR,CDS,intron-Proximal3.9165818.74630HepG2U2AF2
    chr173832443938324520+3'-UTR,CDS,intron-Proximal4.0996118.51946K562U2AF2
    chr173832785438327872+3'-UTR3.109037.44878K562YBX3
    chr173829665138296732+5'-UTR5.7467148.05307K562HNRNPL
    chr173832019338320269+5'-UTR,CDS3.039114.82854HepG2BCLAF1
    chr173832029238320353+5'-UTR,CDS4.5596210.01989K562UCHL5
    chr173832036738320420+5'-UTR,CDS,intron-Proximal3.7878413.88951K562ZNF622
    chr173829743538297510+5'-UTR,CDS,intron-Proximal6.076129.06724K562EFTUD2
    chr173829721638297262+5'-UTR,intron-Distal3.927897.79506K562AQR
    chr173829707538297103+5'-UTR,intron-Proximal4.544294.28193HepG2AQR
    chr173829679838296843+5'-UTR,CDS3.415378.38044K562ZNF622
    chr173829679038296905+5'-UTR,CDS3.009234.79299HepG2PRPF4
    chr173829714038297192+5'-UTR,intron-Distal3.358829.68935K562AQR
    chr173829672538296784+5'-UTR5.7919636.39542K562AGGF1
    chr173829667038296727+5'-UTR6.5525415.77135HepG2HNRNPL
    chr173832027538320367+5'-UTR,CDS3.0772114.40433K562ZNF622
    chr173829661238296663+5'-UTR5.1602056.47295HepG2HNRNPL
    chr173829742038297517+5'-UTR,CDS,intron-Proximal3.0675210.00177HepG2BUD13
    chr173829657538296612+5'-UTR5.0151546.98966HepG2HNRNPL
    chr173829679238296845+5'-UTR,CDS3.702928.19044HepG2GRWD1
    chr173829678438296834+5'-UTR,CDS4.4126116.07409K562AGGF1
    chr173829708538297140+5'-UTR,intron-Distal,intron-Proximal4.096406.32052K562AQR
    chr173829665838296775+5'-UTR3.7623215.04549HepG2AGGF1
    chr173829658938296658+5'-UTR3.601363.53376HepG2AGGF1
    chr173829743438297511+5'-UTR,CDS,intron-Proximal3.765838.62617HepG2AQR
    chr173832035338320419+5'-UTR,CDS3.9901612.90299K562UCHL5
    chr173829721438297298+5'-UTR,intron-Distal4.678915.50285K562PRPF8
    chr173829710738297190+5'-UTR,intron-Distal,intron-Proximal4.541086.46853K562EFTUD2
    chr173829665038296725+5'-UTR5.0618476.54887K562AGGF1
    chr173829743338297478+5'-UTR,CDS,intron-Proximal4.2716515.31355K562AQR
    chr173829660538296736+5'-UTR3.191684.99883K562GTF2F1
    chr173832036538320419+5'-UTR,CDS3.250817.40344HepG2PPIG
    chr173829666238296761+5'-UTR4.190456.37789HepG2GTF2F1
    chr173829657838296651+5'-UTR3.7597926.50916K562HNRNPL
    chr173832026438320337+5'-UTR,CDS3.7616010.05825HepG2GRWD1
    chr173832038738320419+5'-UTR,CDS3.204957.26251HepG2GRWD1
    chr173832020938320256+5'-UTR,CDS3.266435.77418K562UCHL5
    chr173831899438319074+CDS4.2540414.27470HepG2GRWD1
    chr173829785038297862+CDS,intron-Proximal3.310788.07998HepG2PPIG
    chr173831834338318402+CDS3.665263.05512HepG2PRPF4
    chr173831825438318290+CDS,intron-Proximal3.352106.50677K562UCHL5
    chr173831835238318410+CDS,intron-Proximal3.532485.61495HepG2ZNF800
    chr173829747838297500+CDS,intron-Proximal4.7348211.83800K562AQR
    chr173829685038296904+CDS3.135446.95218K562UCHL5
    chr173829782538297859+CDS3.438767.86771K562ZNF622
    chr173829781338297865+CDS,intron-Proximal3.021536.99853HepG2AQR
    chr173831808238318164+CDS3.388384.33822HepG2FXR2
    chr173831809538318162+CDS4.090283.93366K562RBFOX2
    chr173831902638319079+CDS3.013445.53494HepG2BCLAF1
    chr173832554638325606+CDS,intron-Proximal4.5386713.60040K562AQR
    chr173831985538319975+CDS,intron-Distal,intron-Proximal3.0383015.23570K562ZNF622
    chr173831991538319997+CDS,intron-Distal,intron-Proximal4.953508.66757K562DDX24
    chr173829684338296903+CDS3.4308113.93026K562ZNF622
    chr173831814138318164+CDS3.948848.61219K562UCHL5
    chr173832555838325608+CDS,intron-Proximal3.004818.99909K562BUD13
    chr173831808038318130+CDS4.741926.03821HepG2GRWD1
    chr173831813038318164+CDS4.3677313.05811K562ZNF622
    chr173831902538319071+CDS3.499727.82075HepG2PPIG
    chr173832362338323678+CDS,intron-Distal,intron-Proximal3.627567.96049HepG2U2AF2
    chr173831900538319079+CDS3.578609.97367K562UCHL5
    chr173831800438318026+CDS,intron-Proximal3.091399.20212HepG2PPIG
    chr173831802638318069+CDS3.2010210.14543HepG2PPIG
    chr173831834238318407+CDS,intron-Proximal3.6027611.25204HepG2GRWD1
    chr173831835538318406+CDS3.267633.77784K562RBM15
    chr173831984238319903+CDS,intron-Proximal3.097047.63960K562UCHL5
    chr173831998938320032+CDS,intron-Distal3.033765.18023HepG2GRWD1
    chr173831825438318285+CDS,intron-Proximal4.7841811.61341K562ZNF622
    chr173831908538319155+CDS,intron-Proximal4.198026.83823K562DDX24
    chr173829703038297040+CDS,intron-Proximal3.493247.38298HepG2AQR
    chr173832018938320235+CDS3.834308.37042K562ZNF622
    chr173832555538325605+CDS,intron-Proximal3.042016.12601HepG2U2AF2
    chr173831983338319886+CDS,intron-Proximal3.067343.96465HepG2BCLAF1
    chr173831825338318292+CDS,intron-Proximal3.753924.31749K562TRA2A
    chr173831990338319985+CDS,intron-Distal,intron-Proximal4.521614.36390K562PUM1
    chr173831800538318079+CDS,intron-Proximal3.689304.14688HepG2TRA2A
    chr173831897638319005+CDS,intron-Proximal3.948827.58784HepG2BCLAF1
    chr173831801438318054+CDS3.256354.70526K562DDX24
    chr173831908538319146+CDS3.313957.91353HepG2GRWD1
    chr173831834938318408+CDS,intron-Proximal3.693888.45049K562UCHL5
    chr173829698538297019+CDS4.033764.28220HepG2GRWD1
    chr173831805038318164+CDS3.8051813.05774HepG2AGGF1
    chr173832460938324664+CDS3.018313.89082K562TIA1
    chr173831834738318407+CDS,intron-Proximal3.3262013.94993K562ZNF622
    chr173831897738319005+CDS,intron-Proximal3.112906.07808K562UCHL5
    chr173829684538296906+CDS3.857008.38773HepG2GRWD1
    chr173831992038319981+CDS,intron-Distal,intron-Proximal3.689095.31703HepG2EIF3H
    chr173829683938296946+CDS3.9275811.27084HepG2PPIG
    chr173831800538318050+CDS,intron-Proximal3.105654.48744HepG2BCLAF1
    chr173832004638320105+CDS,intron-Proximal3.325095.39278K562ZNF622
    chr173832014838320209+CDS3.409846.29223K562UCHL5
    chr173832554038325613+CDS,intron-Proximal3.597213.05149K562SMNDC1
    chr173831825238318285+CDS,intron-Proximal3.718394.85988HepG2AGGF1
    chr173831834138318407+CDS,intron-Proximal3.5176111.12843K562PUM1
    chr173831908438319155+CDS,intron-Proximal3.6738116.67568K562ZNF622
    chr173832552438325612+CDS,intron-Proximal4.0543515.56018K562SF3B4
    chr173831807338318130+CDS3.184768.73187K562ZNF622
    chr173829744738297536+CDS,intron-Proximal4.732678.11807HepG2PRPF8
    chr173829782238297825+CDS,intron-Proximal4.351884.43680K562ZNF622
    chr173829780138297872+CDS,intron-Proximal3.713916.13643K562AQR
    chr173829746338297505+CDS,intron-Proximal4.664136.69251HepG2AGGF1
    chr173829686238296935+CDS4.589564.48994K562RBM15
    chr173831813638318164+CDS4.000197.65975HepG2BCLAF1
    chr173831825438318316+CDS,intron-Proximal3.078803.96055K562ZNF800
    chr173831988538319967+CDS,intron-Distal,intron-Proximal3.431969.77937HepG2GRWD1
    chr173831993038319958+CDS,intron-Distal,intron-Proximal3.919603.34848HepG2PPIG
    chr173831834738318407+CDS,intron-Proximal3.9804712.01397HepG2BCLAF1
    chr173831825338318279+CDS,intron-Proximal4.326267.97334HepG2BCLAF1
    chr173831973338319760+CDS,intron-Proximal3.188636.72164K562UCHL5
    chr173831807938318165+CDS,intron-Proximal3.214225.20722K562TRA2A
    chr173831800438318048+CDS,intron-Proximal3.9913713.59989K562ZNF622
    chr173831800338318054+CDS,intron-Proximal3.822875.34040K562TRA2A
    chr173831984338319965+CDS,intron-Distal,intron-Proximal3.076734.98497K562LIN28B
    chr173829782338297860+CDS4.554645.10317K562TRA2A
    chr173831897638318994+CDS,intron-Proximal3.588858.39843HepG2GRWD1
    chr173831807438318127+CDS3.020195.27152HepG2BCLAF1
    chr173831984038319885+CDS,intron-Proximal3.453934.02291HepG2GRWD1
    chr173831998638320028+CDS,intron-Distal3.847074.76274K562UCHL5
    chr173831800438318050+CDS,intron-Proximal3.596497.11351HepG2AGGF1
    chr173832429738324338+intron-Distal,intron-Proximal4.009705.16342K562SF3B4
    chr173832322438323330+intron-Distal4.632026.57443HepG2HNRNPC
    chr173832323838323297+intron-Distal3.308435.83656K562PRPF8
    chr173830666838306735+intron-Distal4.223264.85626K562TARDBP
    chr173832486838324913+intron-Distal4.300997.29386HepG2U2AF2
    chr173832391838323969+intron-Distal,intron-Proximal3.608848.59767K562TIA1
    chr173832322638323238+intron-Distal4.905176.45599K562PRPF8
    chr173832428638324327+intron-Distal,intron-Proximal3.182694.11767K562U2AF2
    chr173829750038297532+intron-Proximal4.326129.29543K562AQR
    chr173829704438297075+intron-Proximal4.7936910.73647HepG2AQR
    chr173832467938324742+intron-Proximal4.371335.97994K562AQR
    chr173832438438324426+intron-Proximal4.158853.28488HepG2RBM5
    chr173832388438323918+intron-Proximal4.2762214.44664K562TIA1
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for CASC3 is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for CASC3 is not available on ENCORE database.

    • 88 RBPs can affect the levels of CASC3.  








    The Knockdown/knockout RNA-Seq assay for CASC3 is not available on ENCORE database.





    88 RBPs can affect the gene expression of CASC3 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    CASC3ENSG00000108349.102732.709102312.527900.240803.502602.83240HepG2ACO1
    CASC3ENSG00000108349.101200.258001720.95930-0.519904.640903.50120HepG2BCLAF1
    CASC3ENSG00000108349.102365.819802782.20310-0.233902.239701.54090HepG2CALR
    CASC3ENSG00000108349.101909.114003878.50950-1.0226010.294408.84830HepG2CNOT7
    CASC3ENSG00000108349.10852.466501223.35420-0.521105.130103.72660HepG2CSTF2
    CASC3ENSG00000108349.102607.551402987.83050-0.196402.915802.15750HepG2DAZAP1
    CASC3ENSG00000108349.102192.333502941.04430-0.423903.639002.93210HepG2DDX3X
    CASC3ENSG00000108349.101456.368601947.37760-0.419203.063002.25590HepG2DDX55
    CASC3ENSG00000108349.101645.904602526.62430-0.618306.160505.26730HepG2DDX6
    CASC3ENSG00000108349.101724.788602126.19810-0.301905.210004.36090HepG2DNAJC2
    CASC3ENSG00000108349.101778.004902259.66210-0.345803.484702.54440HepG2EWSR1
    CASC3ENSG00000108349.101259.485401620.87560-0.363902.587301.35520HepG2FKBP4
    CASC3ENSG00000108349.102656.429402010.466400.401904.247003.28390HepG2FUBP3
    CASC3ENSG00000108349.101726.269402512.13450-0.541305.164404.26740HepG2G3BP1
    CASC3ENSG00000108349.101375.808201886.89140-0.455704.130902.88430HepG2GNB2L1
    CASC3ENSG00000108349.102442.170703590.73010-0.556103.649502.36920HepG2GRSF1
    CASC3ENSG00000108349.102248.997602745.91180-0.288003.947302.86260HepG2HNRNPA2B1
    CASC3ENSG00000108349.102018.836602408.80860-0.254801.940101.34760HepG2HNRNPC
    CASC3ENSG00000108349.103295.629102544.132200.373303.559102.77260HepG2HNRNPK
    CASC3ENSG00000108349.103156.777502721.678700.213903.444002.69970HepG2HNRNPL
    CASC3ENSG00000108349.102515.079403293.43700-0.389003.541002.83910HepG2HNRNPLL
    CASC3ENSG00000108349.101936.891302392.87920-0.305003.224202.57330HepG2HNRNPU
    CASC3ENSG00000108349.101824.591202444.23810-0.4218010.315608.99150HepG2ILF2
    CASC3ENSG00000108349.101935.155002709.18960-0.485404.563703.72710HepG2MAGOH
    CASC3ENSG00000108349.101911.249302724.30380-0.511404.494903.70820HepG2MATR3
    CASC3ENSG00000108349.102469.304503094.53280-0.325603.612402.68930HepG2MSI2
    CASC3ENSG00000108349.102507.860202962.72770-0.240502.452501.73750HepG2NOL12
    CASC3ENSG00000108349.103786.842102920.246700.374803.650502.79180HepG2NSUN2
    CASC3ENSG00000108349.101971.808602483.10260-0.332602.373001.70010HepG2PABPC4
    CASC3ENSG00000108349.102140.865802533.42070-0.242903.172902.53070HepG2PCBP1
    CASC3ENSG00000108349.103415.301702860.188200.255803.535702.67060HepG2PRPF4
    CASC3ENSG00000108349.102080.746802577.86180-0.309104.442003.78430HepG2PTBP1
    CASC3ENSG00000108349.102035.460102828.18850-0.474506.093805.25400HepG2PUF60
    CASC3ENSG00000108349.102400.736903002.25350-0.322607.051906.19410HepG2PUM1
    CASC3ENSG00000108349.102050.220503000.05650-0.549209.657108.44340HepG2PUM2
    CASC3ENSG00000108349.101974.611302355.44470-0.254403.645602.95900HepG2PUS1
    CASC3ENSG00000108349.103202.891402294.353400.481202.427101.76380HepG2RAVER1
    CASC3ENSG00000108349.105194.549403936.034300.400206.276105.05090HepG2RBM15
    CASC3ENSG00000108349.103196.563502533.804800.335103.619502.85550HepG2RBM25
    CASC3ENSG00000108349.101634.330502229.16460-0.447804.201602.96230HepG2RBM27
    CASC3ENSG00000108349.102392.346902868.90310-0.262103.588702.98890HepG2NELFE
    CASC3ENSG00000108349.101953.306703896.45820-0.9962012.3757010.74070HepG2RPS3A
    CASC3ENSG00000108349.101420.919801808.50950-0.348002.565801.65880HepG2SERBP1
    CASC3ENSG00000108349.102349.092102683.86630-0.192202.123501.59530HepG2SF3B4
    CASC3ENSG00000108349.105004.497203627.166000.464302.837402.04710HepG2SNRNP70
    CASC3ENSG00000108349.104460.146903432.255200.377809.066108.30290HepG2SRFBP1
    CASC3ENSG00000108349.103139.024802801.383700.164101.855901.44630HepG2SRSF1
    CASC3ENSG00000108349.101899.608902792.43200-0.5558013.6827012.43620HepG2SRSF5
    CASC3ENSG00000108349.103557.251602518.016200.4984010.035609.07440HepG2TAF15
    CASC3ENSG00000108349.102755.903502313.689200.252202.342401.57090HepG2TIA1
    CASC3ENSG00000108349.101909.121802324.93550-0.284301.822001.39850HepG2TIAL1
    CASC3ENSG00000108349.101834.266202345.92670-0.355005.909205.14020HepG2TRIM56
    CASC3ENSG00000108349.104069.693203271.096200.315002.416301.82580HepG2U2AF1
    CASC3ENSG00000108349.105257.495603079.723200.771502.185101.32070HepG2U2AF2
    CASC3ENSG00000108349.101938.709302924.63190-0.593206.127904.85500HepG2UBE2L3
    CASC3ENSG00000108349.102355.321503184.03160-0.4349010.256809.06150HepG2UPF1
    CASC3ENSG00000108349.102780.805503272.74040-0.235002.973201.89220HepG2UTP18
    CASC3ENSG00000108349.103498.553903074.057700.186502.520401.94370HepG2UTP3
    CASC3ENSG00000108349.101487.732001908.29310-0.359202.733002.01210HepG2XRN2
    CASC3ENSG00000108349.106181.069804077.702200.6000015.7531014.51330K562AGGF1
    CASC3ENSG00000108349.105816.243604480.930700.376202.799201.80880K562AKAP8
    CASC3ENSG00000108349.105772.257504243.071400.443904.147403.34440K562AKAP8L
    CASC3ENSG00000108349.103995.024103208.207800.316302.486201.92360K562AQR
    CASC3ENSG00000108349.105498.442004452.074200.304402.652701.75870K562ATP5C1
    CASC3ENSG00000108349.104488.365403676.354000.287802.243801.46320K562BOP1
    CASC3ENSG00000108349.104703.617203908.852600.266902.737301.95920K562CPSF6
    CASC3ENSG00000108349.106252.067905445.589400.199102.269701.38600K562CELF1
    CASC3ENSG00000108349.107040.498204513.923300.6412022.4454020.77110K562DDX47
    CASC3ENSG00000108349.102649.683502062.348600.361403.113102.14140K562EFTUD2
    CASC3ENSG00000108349.102843.230801859.538000.612504.027002.78940K562EIF3A
    CASC3ENSG00000108349.102385.717101973.365800.273703.115001.87020K562EIF4B
    CASC3ENSG00000108349.104995.831304429.445300.173502.171801.33440K562EIF4G2
    CASC3ENSG00000108349.102665.797902067.222400.366804.963902.40830K562FUBP3
    CASC3ENSG00000108349.103154.248303746.23330-0.248102.200901.52290K562GRSF1
    CASC3ENSG00000108349.103056.202702556.518200.257502.395901.39950K562HNRNPA1
    CASC3ENSG00000108349.106026.845904502.827900.420505.787504.49190K562KIF1C
    CASC3ENSG00000108349.103226.694202471.152000.384804.154602.39820K562LARP7
    CASC3ENSG00000108349.105328.738204310.420900.305902.293301.34410K562MAK16
    CASC3ENSG00000108349.101936.892502538.08950-0.390004.542903.33390K562MATR3
    CASC3ENSG00000108349.105359.197403535.716600.599905.643204.22510K562NAA15
    CASC3ENSG00000108349.104606.999403591.088900.3593011.7521010.36120K562NSUN2
    CASC3ENSG00000108349.102466.006303009.29870-0.287302.777701.97370K562POLR2G
    CASC3ENSG00000108349.108533.773004207.694801.0201025.3727023.73420K562PUS1
    CASC3ENSG00000108349.106419.903004099.986600.646809.199708.14160K562RBM15
    CASC3ENSG00000108349.102835.374602144.255600.403004.634202.84080K562RBM25
    CASC3ENSG00000108349.102627.570902044.240400.362102.532001.75250K562RPS19
    CASC3ENSG00000108349.103058.438303863.76240-0.337202.878701.85530K562RPS3
    CASC3ENSG00000108349.103419.091502681.693200.350403.781402.51040K562SAFB
    CASC3ENSG00000108349.101131.368501717.32310-0.602104.135802.19970K562SERBP1
    CASC3ENSG00000108349.107665.375603913.302900.969905.902303.88840K562SNRNP200
    CASC3ENSG00000108349.103112.837402422.280100.361804.282803.40840K562SRSF1
    CASC3ENSG00000108349.104186.252903177.328300.397707.114805.23030K562SRSF7
    CASC3ENSG00000108349.103780.124103018.552700.324502.754301.93620K562SYNCRIP
    CASC3ENSG00000108349.101916.716002451.54270-0.355102.985102.25020K562TARDBP
    CASC3ENSG00000108349.102831.486402337.902100.276202.352001.49140K562TRIM56
    CASC3ENSG00000108349.102701.195302263.457400.255002.431201.67850K562U2AF2
    CASC3ENSG00000108349.104410.286903807.697400.211902.938902.19870K562UPF1
    CASC3ENSG00000108349.103887.135403258.143200.254602.350301.54260K562WDR3
    CASC3ENSG00000108349.104137.084203387.975500.288105.572504.41510K562WDR43
    CASC3ENSG00000108349.104293.202903614.031800.248302.059801.32700K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for CASC3 is not available on ENCORE database.





    17 RBPs can affect the splicing of CASC3 :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SECASC3ENSG00000108349.10chr17+383241023832420138323731383238653832445538324670-0.054000.000000.00009excludedK562AKAP8L
    SECASC3ENSG00000108349.10chr17+383241023832420138323731383238653832445538324596-0.059000.000000.00000excludedK562PUS1
    SECASC3ENSG00000108349.10chr17+3829782238297860382970943829748738318005383181170.076000.000070.00254includedK562U2AF1
    SECASC3ENSG00000108349.10chr17+383241023832420138323750383238653832445538324670-0.108000.004030.06897excludedK562U2AF1
    SECASC3ENSG00000108349.10chr17+382978223829786038297094382974873831800538318117-0.105000.000000.00002excludedHepG2SF3A3
    SECASC3ENSG00000108349.10chr17+3829782238297860382970943829748738318005383181170.054000.000010.00364includedK562EIF4G2
    SECASC3ENSG00000108349.10chr17+383241023832420138323623383238653832445538324508-0.073000.000000.00000excludedK562UTP18
    SECASC3ENSG00000108349.10chr17+3829782238297860382970943829748738318005383181170.071000.000690.01468includedK562U2AF2
    SECASC3ENSG00000108349.10chr17+383241023832420138323750383238653832445538324670-0.128000.001390.02624excludedK562U2AF2
    SECASC3ENSG00000108349.10chr17+383241023832420138323731383238653832445538324670-0.061000.000000.00000excludedK562RBM15
    SECASC3ENSG00000108349.10chr17+383241023832420138323759383238653832445538324596-0.088000.000000.00000excludedK562AGGF1
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538323049383231140.093000.000080.01260longerK562EFTUD2
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538323049383231140.068000.000040.04302longerK562NSUN2
    A3SSCASC3ENSG00000108349.10chr17+3832302438323114383230493832311438319733383204190.066000.000010.00014longerK562AQR
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538322901383231140.151000.000000.00000longerK562AQR
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538323049383231140.081000.000010.00955longerK562ZC3H8
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538323049383231140.083000.000380.05542longerK562PRPF8
    A3SSCASC3ENSG00000108349.10chr17+3832362338323865383237503832386538323049383231140.081000.000190.09371longerK562FTO
    RICASC3ENSG00000108349.10chr17+383197333832041938319733383198553832013838320419-0.086000.005800.08009excludedHepG2TIAL1
    MXECASC3ENSG00000108349.10chr17+38323623383236883832373138323865383229873832311438324102383242010.146000.000000.000011includedK562AQR
    MXECASC3ENSG00000108349.10chr17+38323623383236883832375038323865383230493832311438324102383242010.102000.000000.000001includedK562AQR
    MXECASC3ENSG00000108349.10chr17+38323623383238653832410238324201383230493832311438324455383245080.157000.000990.015581includedK562U2AF2
    MXECASC3ENSG00000108349.10chr17+38323049383231143832411338324201383197333832041938324455383246700.072000.000480.042071includedK562CPSF6

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for CASC3 is not avaliable on ENCORE database.