C5orf24

General Information

Gene Name       : C5orf24
Gene ID             : ENSG00000181904.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C5orf24)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C5orf24ENSG00000181904.813.6611.2612.46ENCSR000AEF
HepG2C5orf24ENSG00000181904.821.1335.7828.45ENCSR985KAT
K562C5orf24ENSG00000181904.816.3119.2817.80ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C5orf24 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C5orf24 RNA is bound by 20 proteins.  







eCLIP assay for C5orf24 is not avaliable on ENCORE database.





20 proteins are bound to C5orf24 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5134195297134195391+3'-UTR4.003167.17455K562CPSF6
chr5134195252134195348+3'-UTR4.3314913.74051K562KHSRP
chr5134192879134192931+3'-UTR,intron-Distal3.774565.40624K562KHSRP
chr5134195174134195274+3'-UTR4.8066613.76607HepG2U2AF2
chr5134195229134195373+3'-UTR3.313945.82388HepG2DDX55
chr5134191726134191759+3'-UTR,intron-Distal3.844606.12308K562PUM2
chr5134194252134194319+3'-UTR4.307223.97692K562IGF2BP1
chr5134193663134193708+3'-UTR3.941306.42586K562TIA1
chr5134193634134193703+3'-UTR4.9758214.32541HepG2PCBP2
chr5134194099134194154+3'-UTR3.176795.90950K562KHSRP
chr5134193946134193994+3'-UTR3.402826.36450HepG2U2AF2
chr5134193730134193847+3'-UTR4.0847412.97341K562KHSRP
chr5134192388134192481+3'-UTR,intron-Distal3.137393.49353HepG2CSTF2
chr5134194045134194099+3'-UTR3.660158.90469K562KHSRP
chr5134191319134191388+3'-UTR,intron-Distal4.4736925.00201K562PUM2
chr5134193314134193359+3'-UTR3.175175.07515K562KHSRP
chr5134194145134194190+3'-UTR3.873563.47043HepG2KHSRP
chr5134195062134195136+3'-UTR3.449238.32045K562KHSRP
chr5134193880134193987+3'-UTR4.9698816.79818K562LIN28B
chr5134193639134193705+3'-UTR3.088428.62498HepG2U2AF2
chr5134195239134195397+3'-UTR4.7145046.52780K562PUM2
chr5134193632134193663+3'-UTR3.850486.68363K562TIA1
chr5134195253134195354+3'-UTR3.191335.65605HepG2FUBP3
chr5134193359134193442+3'-UTR3.0830310.37175K562KHSRP
chr5134193583134193634+3'-UTR4.5207818.53009HepG2PCBP2
chr5134181762134181884+5'-UTR,intron-Distal4.3985525.04443HepG2DDX3X
chr5134181908134182001+5'-UTR,intron-Distal,intron-Proximal4.205394.55101HepG2PRPF4
chr5134181767134181875+5'-UTR,intron-Distal5.417313.69821K562DDX3X
chr5134181685134181762+5'-UTR,intron-Distal5.8787229.02593HepG2DDX3X
chr5134181781134181880+5'-UTR,intron-Distal4.790276.68186HepG2NCBP2
chr5134181931134182039+5'-UTR,intron-Distal,intron-Proximal3.7578810.46731HepG2EFTUD2
chr5134190833134190951+CDS,intron-Proximal4.136288.66820K562GRWD1
chr5134190814134190940+3'-UTR,CDS,intron-Proximal4.276477.06029HepG2GRWD1
chr5134190812134190944+3'-UTR,CDS,intron-Proximal3.647678.80349K562PUM1
chr5134190802134190936+3'-UTR,CDS,intron-Proximal3.4718310.63268K562UCHL5
chr5134190990134191054+CDS,intron-Distal,intron-Proximal3.261775.06115HepG2PRPF8
chr5134190936134191010+CDS,intron-Distal,intron-Proximal3.174036.02234K562UCHL5
chr5134183558134183615+intron-Distal4.660606.59893HepG2ILF3
chr5134190356134190489+intron-Distal,intron-Proximal3.439885.83938K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C5orf24 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C5orf24 is not available on ENCORE database.

  • 87 RBPs can affect the levels of C5orf24.  








The Knockdown/knockout RNA-Seq assay for C5orf24 is not available on ENCORE database.





87 RBPs can affect the gene expression of C5orf24 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C5orf24ENSG00000181904.81901.808501435.958700.405307.402406.50580HepG2ACO1
C5orf24ENSG00000181904.81688.555401442.761500.226902.352801.63970HepG2AKAP8L
C5orf24ENSG00000181904.81320.344701915.51930-0.536805.215604.15450HepG2ASCC1
C5orf24ENSG00000181904.8804.093301621.46850-1.0119012.5458010.47300HepG2BCCIP
C5orf24ENSG00000181904.81718.755002240.19810-0.382302.048501.52790HepG2BOP1
C5orf24ENSG00000181904.81339.233901778.52930-0.409304.788903.80800HepG2CALR
C5orf24ENSG00000181904.81694.843202762.61820-0.704905.952004.49250HepG2CCAR1
C5orf24ENSG00000181904.81316.547601819.86460-0.467104.217603.27430HepG2CIRBP
C5orf24ENSG00000181904.81128.354801435.71430-0.347505.240604.37770HepG2CKAP4
C5orf24ENSG00000181904.81256.656902056.68390-0.710706.610205.58100HepG2CPSF6
C5orf24ENSG00000181904.81297.228801609.35390-0.311003.435202.30210HepG2YBX3
C5orf24ENSG00000181904.82717.084502067.310800.394205.436104.59020HepG2CELF1
C5orf24ENSG00000181904.81210.988102223.25930-0.8765020.6324018.95710HepG2DAZAP1
C5orf24ENSG00000181904.82868.585802217.686500.371202.908602.26930HepG2DDX3X
C5orf24ENSG00000181904.81256.565401904.87300-0.600205.475004.63200HepG2DDX6
C5orf24ENSG00000181904.81101.889901580.29140-0.520208.409107.23590HepG2DNAJC21
C5orf24ENSG00000181904.81040.425101566.29840-0.5902014.4487013.07440HepG2DNAJC2
C5orf24ENSG00000181904.81292.071801831.36500-0.503204.545903.79640HepG2EIF2S1
C5orf24ENSG00000181904.81441.337101104.087600.384502.908501.98520HepG2EIF3D
C5orf24ENSG00000181904.81286.745402023.95310-0.653406.300605.34080HepG2EIF4A3
C5orf24ENSG00000181904.83346.757202603.866100.362007.098706.21070HepG2ETF1
C5orf24ENSG00000181904.81979.526401403.248300.496306.343505.07910HepG2EWSR1
C5orf24ENSG00000181904.81318.597301774.60880-0.428504.248803.40260HepG2HNRNPC
C5orf24ENSG00000181904.81341.468501675.58790-0.320904.102803.24710HepG2HNRNPF
C5orf24ENSG00000181904.81737.662002025.33820-0.221002.386101.75450HepG2HNRNPL
C5orf24ENSG00000181904.81396.297101762.87710-0.336304.813804.03220HepG2HNRNPU
C5orf24ENSG00000181904.81131.693701649.97720-0.544007.700506.54800HepG2IGF2BP1
C5orf24ENSG00000181904.81405.002601925.49410-0.454704.001003.20270HepG2IGF2BP2
C5orf24ENSG00000181904.81569.842502042.55500-0.379802.820102.15940HepG2MAGOH
C5orf24ENSG00000181904.81272.197202054.02610-0.691107.201206.21900HepG2MATR3
C5orf24ENSG00000181904.81305.972402204.55830-0.7554013.0870011.48430HepG2NOL12
C5orf24ENSG00000181904.81323.278001572.34780-0.248802.355101.67000HepG2PPIL4
C5orf24ENSG00000181904.82195.199801767.135400.312804.529403.86700HepG2PTBP1
C5orf24ENSG00000181904.81485.689002104.33490-0.502206.659405.78820HepG2PUF60
C5orf24ENSG00000181904.81759.602502233.71670-0.344205.442304.66830HepG2PUM1
C5orf24ENSG00000181904.81125.016202232.16450-0.9885015.4153013.91460HepG2PUM2
C5orf24ENSG00000181904.81920.742601462.627000.393006.982806.08180HepG2PUS1
C5orf24ENSG00000181904.81496.776901913.87740-0.354604.194903.44880HepG2QKI
C5orf24ENSG00000181904.83789.471401605.107801.2392012.7531011.33570HepG2RAVER1
C5orf24ENSG00000181904.81428.482302176.37620-0.6074011.8835010.96450HepG2RBM22
C5orf24ENSG00000181904.81801.618301216.725100.566205.293604.23890HepG2RRP9
C5orf24ENSG00000181904.81258.441601569.92760-0.319104.485503.69830HepG2SAFB2
C5orf24ENSG00000181904.81207.056902005.77720-0.732706.322905.28000HepG2SF3A3
C5orf24ENSG00000181904.81649.741802017.46700-0.290303.522402.74660HepG2SLBP
C5orf24ENSG00000181904.8914.810601634.96140-0.837706.555305.02720HepG2SMNDC1
C5orf24ENSG00000181904.83283.576402458.182700.417607.780807.05820HepG2SRFBP1
C5orf24ENSG00000181904.81367.012801646.20460-0.268102.971202.25410HepG2SRSF7
C5orf24ENSG00000181904.81947.951601562.326600.318204.677403.99510HepG2SRSF9
C5orf24ENSG00000181904.82051.174701499.928400.451502.572401.41570HepG2SUB1
C5orf24ENSG00000181904.82067.023601726.090800.259902.590002.04580HepG2TAF15
C5orf24ENSG00000181904.8977.661501713.01250-0.8091016.2715015.24110HepG2TIAL1
C5orf24ENSG00000181904.8897.194801728.27410-0.9458029.7687028.16020HepG2TRIM56
C5orf24ENSG00000181904.8964.566601778.81310-0.8830027.3619025.63230HepG2UPF1
C5orf24ENSG00000181904.8957.893001453.40000-0.601503.073902.01690HepG2UPF2
C5orf24ENSG00000181904.81288.751001828.40540-0.504609.068807.30250HepG2UTP18
C5orf24ENSG00000181904.81290.055501717.38120-0.412806.829905.96010HepG2UTP3
C5orf24ENSG00000181904.8676.451501562.28620-1.2076020.2318018.35300HepG2XRN2
C5orf24ENSG00000181904.81456.147101145.358900.346305.127404.26120HepG2ZC3H8
C5orf24ENSG00000181904.81845.678101544.890300.256502.917502.33650K562AGGF1
C5orf24ENSG00000181904.82707.953001999.814800.437204.194703.50140K562AQR
C5orf24ENSG00000181904.81167.772401613.86860-0.466803.630402.15040K562CIRBP
C5orf24ENSG00000181904.81764.819702236.84220-0.341904.424003.00430K562CPEB4
C5orf24ENSG00000181904.84827.183903241.517400.5744012.3230010.35010K562CELF1
C5orf24ENSG00000181904.81941.247702314.60930-0.253803.220202.52550K562DDX47
C5orf24ENSG00000181904.8826.256201210.39230-0.550804.540602.40320K562DDX51
C5orf24ENSG00000181904.81219.236001555.00930-0.350904.225803.36540K562EIF2S2
C5orf24ENSG00000181904.8883.012501277.64100-0.533005.595104.43190K562EIF4A3
C5orf24ENSG00000181904.83311.211202636.648100.328605.470504.16960K562EIF4G2
C5orf24ENSG00000181904.81051.474901792.54220-0.7696010.645108.85960K562FIP1L1
C5orf24ENSG00000181904.81547.816901099.339900.493504.306902.85180K562FKBP4
C5orf24ENSG00000181904.82113.657001362.215000.633704.299203.37480K562G3BP2
C5orf24ENSG00000181904.81881.050001364.357100.463205.565703.97390K562GLRX3
C5orf24ENSG00000181904.81503.570602072.26050-0.462805.501504.43310K562GRSF1
C5orf24ENSG00000181904.8948.974601266.43160-0.416303.879303.18740K562HNRNPC
C5orf24ENSG00000181904.8732.427701130.88150-0.626707.309905.38560K562HNRNPF
C5orf24ENSG00000181904.8953.105401474.31630-0.629306.115104.65690K562HNRNPM
C5orf24ENSG00000181904.81787.519502430.41230-0.443204.711203.67960K562HSPD1
C5orf24ENSG00000181904.81144.809601505.03120-0.394702.511701.54970K562IGF2BP2
C5orf24ENSG00000181904.81025.152901531.14050-0.578805.677903.86060K562IGF2BP3
C5orf24ENSG00000181904.83309.047802260.355200.549802.926401.46340K562ILF2
C5orf24ENSG00000181904.81180.445401712.09420-0.536405.121503.90920K562METAP2
C5orf24ENSG00000181904.81682.010301434.433800.229602.404701.64990K562MTPAP
C5orf24ENSG00000181904.81873.563001593.839600.233203.315802.50550K562NSUN2
C5orf24ENSG00000181904.81343.073702034.78140-0.599307.490705.99850K562PPIG
C5orf24ENSG00000181904.8844.253301090.63620-0.369402.454701.74720K562PRPF8
C5orf24ENSG00000181904.82628.633701594.286300.7213010.204809.20740K562PUS1
C5orf24ENSG00000181904.81873.301201553.334900.270101.826801.32720K562RBM15
C5orf24ENSG00000181904.81095.379501437.19210-0.391802.656301.32120K562RBM34
C5orf24ENSG00000181904.81063.058201383.79780-0.380403.162201.34530K562RECQL
C5orf24ENSG00000181904.8704.110301110.98570-0.658005.738704.55780K562RPS19
C5orf24ENSG00000181904.8817.659501321.73290-0.692907.418305.67000K562RPS3
C5orf24ENSG00000181904.8898.868801276.04900-0.505505.431603.86740K562SRSF4
C5orf24ENSG00000181904.81112.685101471.47450-0.403202.757401.94170K562TIA1
C5orf24ENSG00000181904.81159.504901443.50100-0.316102.288301.31600K562TRA2A
C5orf24ENSG00000181904.8780.010401160.19840-0.572805.805004.31900K562TRIM56
C5orf24ENSG00000181904.81657.553101282.877300.369602.622901.45530K562UTP3
C5orf24ENSG00000181904.8796.408101138.02570-0.515004.387202.73550K562XRN2
C5orf24ENSG00000181904.82941.588502252.916900.384703.999202.92870K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C5orf24 is not available on ENCORE database.





1 RBPs can affect the splicing of C5orf24 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC5orf24ENSG00000181904.8chr5+1341823521341825531341818431341819021341905871341911780.122000.002490.02635includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C5orf24 is not avaliable on ENCORE database.