ATE1

General Information

Gene Name       : ATE1
Gene ID             : ENSG00000107669.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATE1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATE1ENSG00000107669.179.849.489.66ENCSR000AEF
HepG2ATE1ENSG00000107669.1719.6324.5622.09ENCSR985KAT
K562ATE1ENSG00000107669.175.755.925.83ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATE1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATE1 RNA is bound by 16 proteins.  







eCLIP assay for ATE1 is not avaliable on ENCORE database.





16 proteins are bound to ATE1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10123500395123500444-3'-UTR,intron-Distal3.852304.67754HepG2FUBP3
chr10123500243123500313-3'-UTR,intron-Distal5.7190821.51323HepG2FUBP3
chr10123683780123683833-5'-UTR,CDS,intron-Distal,intron-Proximal3.031787.60977HepG2PPIG
chr10123673304123673341-5'-UTR,CDS,intron-Distal,intron-Proximal4.059105.36555HepG2BCLAF1
chr10123683779123683829-5'-UTR,CDS,intron-Distal,intron-Proximal3.352508.50351HepG2BCLAF1
chr10123681862123681902-5'-UTR,CDS,intron-Distal,intron-Proximal3.497438.16183HepG2BCLAF1
chr10123681902123681918-5'-UTR,CDS,intron-Distal4.6702910.13662HepG2BCLAF1
chr10123670409123670537-5'-UTR,CDS,intron-Distal,intron-Proximal3.8182018.97241HepG2BCLAF1
chr10123670585123670668-5'-UTR,CDS,intron-Distal,intron-Proximal3.615539.83905HepG2BCLAF1
chr10123673395123673410-5'-UTR,CDS,intron-Distal,intron-Proximal4.173684.08604HepG2PPIG
chr10123681862123681928-5'-UTR,CDS,intron-Distal,intron-Proximal3.7496810.41365HepG2PPIG
chr10123681918123681926-5'-UTR,CDS,intron-Distal4.430567.82199HepG2BCLAF1
chr10123673354123673413-5'-UTR,CDS,intron-Distal,intron-Proximal3.263226.50801HepG2BCLAF1
chr10123629484123629547-CDS,intron-Distal,intron-Proximal4.802234.35676HepG2PRPF8
chr10123662098123662136-CDS,intron-Distal,intron-Proximal3.150845.63425HepG2BCLAF1
chr10123658238123658313-intron-Distal,intron-Proximal4.984866.39049HepG2U2AF2
chr10123674446123674514-intron-Distal3.914776.77642HepG2SUGP2
chr10123686008123686059-intron-Distal4.676883.35169HepG2U2AF2
chr10123649858123649938-intron-Distal3.780733.04956HepG2HNRNPL
chr10123639759123639855-intron-Distal3.319453.56114HepG2KHSRP
chr10123586117123586281-intron-Distal3.202993.76460HepG2HNRNPL
chr10123644083123644226-intron-Distal3.309763.59351HepG2MATR3
chr10123674253123674321-intron-Distal3.255024.40773HepG2SUGP2
chr10123674393123674427-intron-Distal3.497304.08528HepG2SUGP2
chr10123685345123685405-intron-Distal4.316445.19287HepG2HNRNPC
chr10123651854123651948-intron-Distal3.627166.91621HepG2PCBP2
chr10123681739123681780-intron-Distal,intron-Proximal4.436384.20763HepG2U2AF2
chr10123614867123614953-intron-Distal4.257803.80778HepG2QKI
chr10123675023123675099-intron-Distal4.426514.51299HepG2SUGP2
chr10123673986123674022-intron-Distal3.439833.10640HepG2SUGP2
chr10123623159123623285-intron-Distal6.4887813.49496HepG2DKC1
chr10123644075123644166-intron-Distal3.001553.99165HepG2PTBP1
chr10123643575123643626-intron-Distal4.420314.65900HepG2HNRNPC
chr10123674333123674393-intron-Distal4.884546.62827HepG2SUGP2
chr10123674161123674221-intron-Distal3.799465.54651HepG2SUGP2
chr10123593101123593163-intron-Distal3.704833.06084HepG2HNRNPK
chr10123687186123687244-intron-Distal3.431176.48305HepG2EFTUD2
chr10123687278123687328-intron-Distal4.939167.37772HepG2EFTUD2
chr10123596665123596826-intron-Distal3.210573.90146K562KHSRP
chr10123686390123686504-intron-Distal3.860353.02234K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATE1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATE1 is not available on ENCORE database.

  • 69 RBPs can affect the levels of ATE1.  








The Knockdown/knockout RNA-Seq assay for ATE1 is not available on ENCORE database.





69 RBPs can affect the gene expression of ATE1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATE1ENSG00000107669.13923.416801159.96640-0.329003.956003.25300HepG2ACO1
ATE1ENSG00000107669.13603.825101076.63010-0.834307.496405.91320HepG2BCCIP
ATE1ENSG00000107669.13728.19600947.73970-0.380202.696102.10480HepG2BOP1
ATE1ENSG00000107669.13625.988201159.78460-0.8896023.3878021.87830HepG2CKAP4
ATE1ENSG00000107669.13836.716801072.83500-0.358604.608403.56840HepG2DDX19B
ATE1ENSG00000107669.13735.017201058.51260-0.526203.298702.46440HepG2DDX55
ATE1ENSG00000107669.13891.267201109.79170-0.316403.191402.47270HepG2DKC1
ATE1ENSG00000107669.13807.430301110.98190-0.460404.008303.25270HepG2DNAJC2
ATE1ENSG00000107669.13630.625801044.99480-0.728607.532606.09360HepG2EEF2
ATE1ENSG00000107669.131093.354001667.88160-0.609306.250805.37860HepG2EIF2S1
ATE1ENSG00000107669.131102.618901843.21000-0.741307.801106.72950HepG2EIF4A3
ATE1ENSG00000107669.13927.876401794.61440-0.951709.801508.54540HepG2EIF4B
ATE1ENSG00000107669.131749.707302090.71180-0.256902.863802.25400HepG2ETF1
ATE1ENSG00000107669.13798.693901133.55680-0.505105.308704.15240HepG2EWSR1
ATE1ENSG00000107669.131336.124401859.70710-0.477004.255903.41110HepG2FXR1
ATE1ENSG00000107669.131280.867901725.15870-0.429603.218302.50370HepG2G3BP1
ATE1ENSG00000107669.131361.840601831.46710-0.427403.611502.58670HepG2G3BP2
ATE1ENSG00000107669.13705.75930986.39210-0.483002.877702.22560HepG2GPKOW
ATE1ENSG00000107669.13409.368301131.72190-1.4670030.5875028.86930HepG2HNRNPA1
ATE1ENSG00000107669.13601.048801258.79710-1.0665018.2274016.61440HepG2HNRNPC
ATE1ENSG00000107669.13892.491301091.27800-0.290103.109202.35180HepG2HNRNPF
ATE1ENSG00000107669.131194.331601746.86160-0.548605.935704.94300HepG2HNRNPK
ATE1ENSG00000107669.131215.237301468.03380-0.272603.585702.82450HepG2HNRNPL
ATE1ENSG00000107669.13596.288601250.47720-1.0684030.3113028.49030HepG2HNRNPU
ATE1ENSG00000107669.131285.367701753.58880-0.448103.867103.08100HepG2IGF2BP2
ATE1ENSG00000107669.13854.152201645.65640-0.946104.842503.55560HepG2IGF2BP3
ATE1ENSG00000107669.13524.376001277.32690-1.2845049.2269046.71390HepG2ILF2
ATE1ENSG00000107669.13767.664101053.22960-0.456302.848701.63510HepG2KHDRBS1
ATE1ENSG00000107669.13898.812201060.39850-0.238502.376201.43020HepG2KIF1C
ATE1ENSG00000107669.13720.101201682.55580-1.2244016.9432014.92290HepG2LARP4
ATE1ENSG00000107669.13820.215001171.56320-0.514404.611203.03350HepG2LIN28B
ATE1ENSG00000107669.131458.929101860.35630-0.350702.432201.81630HepG2MAGOH
ATE1ENSG00000107669.131507.217201870.77080-0.311701.844101.32350HepG2MATR3
ATE1ENSG00000107669.131227.740601914.83990-0.641206.623505.66270HepG2NCBP2
ATE1ENSG00000107669.13934.475701298.32360-0.474402.765601.33720HepG2NKRF
ATE1ENSG00000107669.131180.926501598.03990-0.436405.623504.54320HepG2NOL12
ATE1ENSG00000107669.13897.747401237.80120-0.463406.634905.40840HepG2PARN
ATE1ENSG00000107669.131110.601701681.87210-0.5987012.6639011.51600HepG2PCBP1
ATE1ENSG00000107669.13836.327701330.53040-0.669905.892103.23040HepG2PPIG
ATE1ENSG00000107669.13721.885101115.33170-0.627609.754608.41500HepG2PPIL4
ATE1ENSG00000107669.131211.798601041.268800.218702.006201.34050HepG2PRPF4
ATE1ENSG00000107669.131390.705401711.34930-0.299303.886403.26240HepG2PTBP1
ATE1ENSG00000107669.131012.808701181.51130-0.222302.130401.57270HepG2PUS1
ATE1ENSG00000107669.131353.359201747.46230-0.368704.556203.93470HepG2RBM22
ATE1ENSG00000107669.131133.976101904.58280-0.7481018.5787017.41930HepG2NELFE
ATE1ENSG00000107669.131362.331601773.83220-0.380805.726704.87980HepG2RECQL
ATE1ENSG00000107669.13867.121401175.70860-0.439204.205603.39070HepG2RPLP0
ATE1ENSG00000107669.13637.91710825.43930-0.371802.782002.16550HepG2RPS19
ATE1ENSG00000107669.13552.04410807.97140-0.549503.436802.57410HepG2RRP9
ATE1ENSG00000107669.13751.676101113.62540-0.567109.890008.79000HepG2SAFB2
ATE1ENSG00000107669.131479.077701781.76860-0.268603.148402.52280HepG2SF3B4
ATE1ENSG00000107669.13916.983801298.70950-0.502109.801208.70760HepG2SMN1
ATE1ENSG00000107669.131081.485101713.69970-0.6641015.6213014.60670HepG2SSB
ATE1ENSG00000107669.131174.625201712.93090-0.5443012.0057010.86470HepG2SUCLG1
ATE1ENSG00000107669.13939.954601382.07490-0.556203.848902.26830HepG2SUGP2
ATE1ENSG00000107669.13606.04660917.32830-0.598005.502804.53320HepG2TARDBP
ATE1ENSG00000107669.13542.397001215.20070-1.1638026.5834025.32910HepG2TIAL1
ATE1ENSG00000107669.13711.249701225.92580-0.7854017.6596016.39690HepG2TRIM56
ATE1ENSG00000107669.131459.080401136.232900.360702.672002.05360HepG2U2AF1
ATE1ENSG00000107669.131006.744601577.45350-0.647906.292804.99810HepG2UBE2L3
ATE1ENSG00000107669.131038.704901209.68830-0.219802.027501.41350HepG2UPF1
ATE1ENSG00000107669.13570.08380965.11230-0.759504.852703.50400HepG2UPF2
ATE1ENSG00000107669.13563.537201037.34250-0.880309.397308.08250HepG2XRN2
ATE1ENSG00000107669.13885.747901330.41990-0.5869010.777009.87360HepG2ZNF622
ATE1ENSG00000107669.13304.26070388.40770-0.352301.946101.45450K562AGGF1
ATE1ENSG00000107669.13305.62170404.15200-0.403202.102801.53080K562AKAP8L
ATE1ENSG00000107669.13641.98000462.059500.474304.428603.62980K562DDX47
ATE1ENSG00000107669.13200.89640288.06780-0.520003.199201.88790K562EIF2S1
ATE1ENSG00000107669.13372.92160284.949000.388102.156201.61020K562FXR1
ATE1ENSG00000107669.13146.68080232.97190-0.667502.639402.05440K562HNRNPC
ATE1ENSG00000107669.13265.10110369.99800-0.481002.681301.87680K562PPIG
ATE1ENSG00000107669.13118.29230208.86790-0.820202.627001.74950K562PSIP1
ATE1ENSG00000107669.13937.62380653.516000.520704.687703.62900K562PUF60
ATE1ENSG00000107669.13363.91880243.684700.578502.921902.08070K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATE1 is not available on ENCORE database.





7 RBPs can affect the splicing of ATE1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATE1ENSG00000107669.13chr10-1236859371236860421236837801236838441236873581236875360.299000.000000.00001includedHepG2U2AF1
SEATE1ENSG00000107669.13chr10-123658355123658484123629520123629553123661905123662135-0.159000.002900.02975excludedK562AQR
MXEATE1ENSG00000107669.13chr10-1236583551236584841236593801236595091236295201236295531236619051236621350.261000.000110.003321includedHepG2U2AF1
MXEATE1ENSG00000107669.13chr10-1236619051236621351236704201236706661236583551236584841236733041236734080.176000.006160.083361includedHepG2U2AF1
MXEATE1ENSG00000107669.13chr10-123658355123658484123659380123659509123629520123629553123661905123662135-0.472000.000010.000852includedK562PTBP1
MXEATE1ENSG00000107669.13chr10-1236733041236734081236818631236819261236704201236706661236837801236838440.196000.001470.023671includedK562DROSHA
MXEATE1ENSG00000107669.13chr10-123658355123658484123659380123659509123629520123629553123661905123662135-0.495000.000000.000292includedK562FXR1
MXEATE1ENSG00000107669.13chr10-1236583551236584841236593801236595091236295201236295531236619051236621350.225000.009210.059191includedK562AQR
MXEATE1ENSG00000107669.13chr10-123661905123662135123670420123670666123659380123659509123673304123673408-0.221000.017470.098782includedK562AQR
MXEATE1ENSG00000107669.13chr10-1236583551236584841236593801236595091236295201236295531236619051236621350.303000.000900.007421includedHepG2U2AF2
MXEATE1ENSG00000107669.13chr10-1236733041236734081236818631236819261236704201236706661236837801236838440.134000.000740.006341includedHepG2U2AF2
MXEATE1ENSG00000107669.13chr10-1236733041236734081236818631236819261236704201236706661236837801236838440.118000.006770.077481includedHepG2HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATE1 is not avaliable on ENCORE database.