AP000525.9

General Information

Gene Name       : AP000525.9
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AP000525.9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AP000525.9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AP000525.9 RNA is bound by 9 proteins.  







eCLIP assay for AP000525.9 is not avaliable on ENCORE database.





9 proteins are bound to AP000525.9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr221614993916150049-intron-Distal4.200696.22361HepG2HLTF
chr221615638116156439-intron-Distal4.698963.75440HepG2XRN2
chr221615156216151615-intron-Distal3.391533.88253HepG2HLTF
chr221614919916149245-intron-Distal3.267573.34034HepG2HLTF
chr221618356016183627-intron-Distal3.758635.03335K562UCHL5
chr221616279416162878-intron-Distal3.738603.43228K562SAFB2
chr221615664016156726-intron-Distal3.567773.15856K562FUS
chr221619078716190851-intron-Distal,intron-Proximal3.105614.18806HepG2U2AF2
chr221618355816183636-intron-Distal4.111607.42137HepG2HLTF
chr221618356116183621-intron-Distal3.720393.87469HepG2BCLAF1
chr221615901416159110-intron-Distal4.2029912.89472HepG2HNRNPL
chr221615636516156441-intron-Distal4.833663.51211HepG2SLTM
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AP000525.9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AP000525.9 is not available on ENCORE database.

  • 79 RBPs can affect the levels of AP000525.9.  








The Knockdown/knockout RNA-Seq assay for AP000525.9 is not available on ENCORE database.





79 RBPs can affect the gene expression of AP000525.9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AP000525.9ENSG00000206195.61326.93370872.543800.6047012.2163011.13120HepG2ACO1
AP000525.9ENSG00000206195.61173.70750675.819000.7963010.834709.75290HepG2BOP1
AP000525.9ENSG00000206195.6657.68420872.42570-0.407604.984104.13960HepG2CKAP4
AP000525.9ENSG00000206195.61408.650001162.982200.276402.892602.23800HepG2CELF1
AP000525.9ENSG00000206195.6666.05540863.33570-0.374303.327302.05750HepG2DDX1
AP000525.9ENSG00000206195.6580.87090840.42930-0.532903.584302.88900HepG2DDX6
AP000525.9ENSG00000206195.6623.78900834.80650-0.420404.316403.50650HepG2DKC1
AP000525.9ENSG00000206195.6548.94780846.56050-0.624908.243807.08290HepG2DNAJC21
AP000525.9ENSG00000206195.6697.66970839.03470-0.266202.492301.86730HepG2DNAJC2
AP000525.9ENSG00000206195.6746.76800536.459500.477103.541502.52600HepG2EIF3D
AP000525.9ENSG00000206195.61887.41640869.288401.118409.716008.46580HepG2EIF4B
AP000525.9ENSG00000206195.6929.791501233.67950-0.408005.200204.11050HepG2EIF4G1
AP000525.9ENSG00000206195.62006.260601582.619900.342104.830204.07550HepG2ETF1
AP000525.9ENSG00000206195.61629.21670914.999200.832209.976808.63560HepG2FIP1L1
AP000525.9ENSG00000206195.6373.78620621.47430-0.733502.590601.60980HepG2FTO
AP000525.9ENSG00000206195.6452.10710703.41560-0.637703.302902.60920HepG2GPKOW
AP000525.9ENSG00000206195.6578.36170854.67020-0.563405.104404.26300HepG2HNRNPA1
AP000525.9ENSG00000206195.6603.60880950.64590-0.655306.896905.84180HepG2HNRNPC
AP000525.9ENSG00000206195.6636.85070846.23300-0.410102.797302.09520HepG2HNRNPK
AP000525.9ENSG00000206195.6627.15850875.55940-0.481402.121501.48120HepG2IGF2BP1
AP000525.9ENSG00000206195.61581.75820797.163300.988504.354803.12680HepG2IGF2BP3
AP000525.9ENSG00000206195.6850.93580561.474700.599703.090601.97650HepG2METAP2
AP000525.9ENSG00000206195.6577.60360740.76170-0.358902.107101.39630HepG2MSI2
AP000525.9ENSG00000206195.6724.76000927.52870-0.355902.068501.51680HepG2NCBP2
AP000525.9ENSG00000206195.6354.42060595.16330-0.747804.117803.21020HepG2NSUN2
AP000525.9ENSG00000206195.6439.88710845.59780-0.942803.014502.08490HepG2PABPC1
AP000525.9ENSG00000206195.61293.99420934.777600.469006.940305.69570HepG2PARN
AP000525.9ENSG00000206195.61200.29330763.392100.6528011.6305010.52430HepG2PCBP1
AP000525.9ENSG00000206195.6576.35290842.29840-0.547406.611405.51020HepG2PPIL4
AP000525.9ENSG00000206195.61022.00490776.730400.395804.160603.52010HepG2PTBP1
AP000525.9ENSG00000206195.6659.926101183.63910-0.8429012.5237011.37780HepG2PUF60
AP000525.9ENSG00000206195.61515.056701256.503400.269903.706403.04130HepG2PUM1
AP000525.9ENSG00000206195.6964.030701255.57420-0.381203.075902.36820HepG2PUM2
AP000525.9ENSG00000206195.6685.26490888.75290-0.375104.195703.46440HepG2PUS1
AP000525.9ENSG00000206195.63841.308401322.779901.5379081.2456079.21320HepG2RBM22
AP000525.9ENSG00000206195.6617.23170859.85360-0.478302.821901.75140HepG2RCC2
AP000525.9ENSG00000206195.6780.16350521.971200.579705.618504.77720HepG2RPS19
AP000525.9ENSG00000206195.6944.49710675.445600.483603.779302.87940HepG2RRP9
AP000525.9ENSG00000206195.6702.98440841.00600-0.258602.235201.64530HepG2SAFB2
AP000525.9ENSG00000206195.6491.72220930.34640-0.919908.220507.01100HepG2SF3A3
AP000525.9ENSG00000206195.6967.45910808.765700.258401.941401.43150HepG2SF3B4
AP000525.9ENSG00000206195.62752.538001494.035500.8814035.3399034.08010HepG2SRFBP1
AP000525.9ENSG00000206195.61104.06820844.139900.387203.713303.18590HepG2SRSF1
AP000525.9ENSG00000206195.6817.85340686.721400.252001.938201.46050HepG2SRSF9
AP000525.9ENSG00000206195.6791.488401297.18410-0.7127015.0956014.09080HepG2SSB
AP000525.9ENSG00000206195.6603.53640880.77510-0.545302.427901.78920HepG2SUPV3L1
AP000525.9ENSG00000206195.6424.96020654.09880-0.622203.161402.39130HepG2TARDBP
AP000525.9ENSG00000206195.6778.83350590.410600.399502.775901.77930HepG2TFIP11
AP000525.9ENSG00000206195.6522.51860917.68680-0.8125012.3104011.38720HepG2TIAL1
AP000525.9ENSG00000206195.6744.24190925.82300-0.315003.107102.51750HepG2TRIM56
AP000525.9ENSG00000206195.6558.13340825.07210-0.563907.867306.78750HepG2UPF1
AP000525.9ENSG00000206195.6457.49850806.77070-0.818403.115302.04870HepG2UPF2
AP000525.9ENSG00000206195.6532.13730867.02370-0.704303.648302.82490HepG2XRN2
AP000525.9ENSG00000206195.6490.20940673.59630-0.458504.920804.06840HepG2ZC3H8
AP000525.9ENSG00000206195.6563.87480907.42550-0.6864012.9627011.99990HepG2ZNF622
AP000525.9ENSG00000206195.6307.46680189.529200.697904.208102.71940K562AARS
AP000525.9ENSG00000206195.687.12310237.55140-1.447104.639603.93830K562AGGF1
AP000525.9ENSG00000206195.6113.82700247.16740-1.118602.993202.31330K562AKAP8L
AP000525.9ENSG00000206195.6292.15630462.86130-0.663804.548203.83000K562AQR
AP000525.9ENSG00000206195.6150.29880259.30880-0.786802.237401.42430K562ATP5C1
AP000525.9ENSG00000206195.6522.10270385.704500.436703.173201.98310K562CPEB4
AP000525.9ENSG00000206195.6552.06010399.291700.467302.114701.53260K562DDX47
AP000525.9ENSG00000206195.6178.14840297.04100-0.737603.803402.26880K562EEF2
AP000525.9ENSG00000206195.6181.49150286.98650-0.661103.705102.63630K562EFTUD2
AP000525.9ENSG00000206195.6275.47490185.780000.568203.434902.07360K562EIF2S1
AP000525.9ENSG00000206195.6699.93500553.554500.338402.530501.62730K562EIF4G2
AP000525.9ENSG00000206195.6269.80170383.47540-0.507202.217401.45730K562FIP1L1
AP000525.9ENSG00000206195.6310.34920183.773300.755905.445104.63600K562FXR1
AP000525.9ENSG00000206195.6164.00080256.72970-0.646503.062601.75900K562HNRNPK
AP000525.9ENSG00000206195.6153.57360315.38410-1.038206.822305.26240K562HNRNPM
AP000525.9ENSG00000206195.6162.72530256.91970-0.658902.988001.90930K562IGF2BP2
AP000525.9ENSG00000206195.6142.27310262.36090-0.882902.121401.41000K562KIF1C
AP000525.9ENSG00000206195.6375.25980269.585800.477002.936301.98230K562MATR3
AP000525.9ENSG00000206195.6766.71360590.030700.377802.410301.35940K562MSI2
AP000525.9ENSG00000206195.6394.14680287.450200.455303.099302.24570K562MTPAP
AP000525.9ENSG00000206195.690.64450205.99990-1.184403.379002.38540K562NAA15
AP000525.9ENSG00000206195.6321.09060435.27730-0.439002.052901.35020K562PPIG
AP000525.9ENSG00000206195.6195.45260279.27150-0.514802.227701.55050K562PRPF8
AP000525.9ENSG00000206195.6350.05420262.428500.415602.299801.68740K562PTBP1
AP000525.9ENSG00000206195.6112.71400245.23350-1.121502.915602.36090K562PUS1
AP000525.9ENSG00000206195.689.77110238.85090-1.411804.515403.77680K562RBM15
AP000525.9ENSG00000206195.6375.42960264.855300.503202.860001.74750K562NELFE
AP000525.9ENSG00000206195.6454.28280322.890000.492404.016002.90910K562SRPK2
AP000525.9ENSG00000206195.6372.81880269.142400.470002.837102.00560K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AP000525.9 is not available on ENCORE database.





5 RBPs can affect the splicing of AP000525.9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSAP000525.9ENSG00000206195.6chr22-161892631618941116189263161893781619068016190791-0.241000.000010.00136shorterHepG2SRSF1
A3SSAP000525.9ENSG00000206195.6chr22-161892631618941116189263161893781619068016190791-0.200000.000450.05909shorterHepG2PCBP1
A5SSAP000525.9ENSG00000206195.6chr22-161906801619079116190726161907911618926316189411-0.248000.000240.03075shorterHepG2SRSF9
A5SSAP000525.9ENSG00000206195.6chr22-161906801619079116190726161907911618926316189411-0.258000.000030.00561shorterHepG2SF3B4
A5SSAP000525.9ENSG00000206195.6chr22-161906801619079116190726161907911618926316189411-0.318000.000050.08032shorterHepG2FUS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AP000525.9 is not avaliable on ENCORE database.