AGL

General Information

Gene Name       : AGL
Gene ID             : ENSG00000162688.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AGL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AGLENSG00000162688.1613.6111.3112.46ENCSR000AEF
HepG2AGLENSG00000162688.165.259.567.41ENCSR985KAT
K562AGLENSG00000162688.168.469.198.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AGL is not avaliable on ENCORE database.



Proteins bound to RNA
  • AGL RNA is bound by 15 proteins.  







eCLIP assay for AGL is not avaliable on ENCORE database.





15 proteins are bound to AGL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1100389464100389547+3'-UTR4.535325.62025K562KHSRP
chr1100389452100389546+3'-UTR4.229454.38976HepG2ZC3H11A
chr1100315680100315756+5'-UTR3.981723.53770HepG2DDX3X
chr1100315848100315940+5'-UTR5.3278810.86699HepG2PCBP2
chr1100315778100315944+5'-UTR4.280834.07750HepG2HNRNPK
chr1100315762100315807+5'-UTR3.898813.83925K562YBX3
chr1100315774100315934+5'-UTR4.178305.75237K562PCBP1
chr1100345406100345507+CDS,intron-Proximal3.383485.36861HepG2U2AF2
chr1100330113100330145+CDS3.819364.51739HepG2BCLAF1
chr1100376285100376393+CDS3.679564.49887K562ZNF622
chr1100327927100327977+CDS4.665304.78529HepG2BCLAF1
chr1100343329100343381+CDS3.522244.74886HepG2BCLAF1
chr1100335955100336007+CDS,intron-Proximal4.342127.82199HepG2BCLAF1
chr1100376298100376401+CDS5.538927.49561HepG2BCLAF1
chr1100336074100336159+CDS,intron-Proximal3.037895.69345HepG2BCLAF1
chr1100347214100347247+CDS4.491344.34038HepG2BCLAF1
chr1100342103100342148+CDS3.257164.34695HepG2BCLAF1
chr1100376292100376404+CDS,intron-Proximal5.048267.31591K562UCHL5
chr1100346264100346323+CDS3.930564.93978HepG2BCLAF1
chr1100343221100343273+CDS3.687843.27569HepG2BCLAF1
chr1100342016100342077+CDS3.069463.05068HepG2U2AF2
chr1100340694100340740+CDS,intron-Proximal3.359093.32861HepG2U2AF2
chr1100387089100387164+CDS,intron-Proximal4.073754.32914K562YBX3
chr1100327061100327143+CDS3.391896.74947HepG2BCLAF1
chr1100349675100349734+CDS,intron-Proximal3.176664.61799HepG2BCLAF1
chr1100366195100366247+CDS4.045443.66349K562LIN28B
chr1100342042100342098+CDS3.796395.56491HepG2BCLAF1
chr1100323393100323466+intron-Distal4.263573.77360K562GTF2F1
chr1100336483100336555+intron-Distal,intron-Proximal4.2497411.01904K562KHSRP
chr1100352241100352345+intron-Distal3.517064.72639K562KHSRP
chr1100321925100321991+intron-Distal4.602674.32196HepG2PCBP2
chr1100345377100345454+intron-Distal,intron-Proximal4.374823.91475K562PTBP1
chr1100345251100345332+intron-Distal4.638836.12104HepG2QKI
chr1100353372100353518+intron-Distal,intron-Proximal4.466224.10688K562KHSRP
chr1100336555100336600+intron-Distal3.308123.68839K562KHSRP
chr1100316774100316829+intron-Distal,intron-Proximal3.950013.66668K562KHSRP
chr1100336470100336483+intron-Proximal4.771575.19823K562KHSRP
chr1100336189100336281+intron-Proximal3.791535.35459K562KHSRP
chr1100345393100345478+intron-Proximal4.072923.41738HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AGL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AGL is not available on ENCORE database.

  • 88 RBPs can affect the levels of AGL.  








The Knockdown/knockout RNA-Seq assay for AGL is not available on ENCORE database.





88 RBPs can affect the gene expression of AGL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AGLENSG00000162688.111168.90080964.212800.277602.770802.00380HepG2AKAP8L
AGLENSG00000162688.11529.90410949.53400-0.841507.142305.59530HepG2BCCIP
AGLENSG00000162688.111425.10320934.765000.608306.221105.09050HepG2CIRBP
AGLENSG00000162688.111266.82810959.498000.400806.174005.25280HepG2CKAP4
AGLENSG00000162688.11714.18720934.05540-0.387202.572001.90550HepG2CPSF6
AGLENSG00000162688.111044.01110887.583800.234102.262801.50390HepG2DDX19B
AGLENSG00000162688.11947.10730727.465000.380602.587201.92770HepG2DDX21
AGLENSG00000162688.111140.41410711.310100.680908.844707.23620HepG2DDX24
AGLENSG00000162688.111677.633601139.094300.558405.226604.39040HepG2DDX3X
AGLENSG00000162688.11657.06470978.45730-0.574504.223203.47260HepG2DDX6
AGLENSG00000162688.11546.72720831.01100-0.604007.737106.60890HepG2DNAJC21
AGLENSG00000162688.11598.42980823.67130-0.460906.162905.24650HepG2DNAJC2
AGLENSG00000162688.11919.12880686.592700.420703.429302.24390HepG2EIF3G
AGLENSG00000162688.111323.991601012.119100.387402.001701.41050HepG2EIF4B
AGLENSG00000162688.111581.029001211.905400.383504.705203.65840HepG2EIF4G1
AGLENSG00000162688.11944.359501160.96910-0.297902.166301.43890HepG2EIF4G2
AGLENSG00000162688.11991.86630760.798500.382503.019801.88300HepG2ESF1
AGLENSG00000162688.11725.65050444.515300.706907.027605.81230HepG2FUBP3
AGLENSG00000162688.11751.913401058.90340-0.493902.615901.99090HepG2GPKOW
AGLENSG00000162688.11352.87760933.20110-1.4030024.8605023.02660HepG2HNRNPC
AGLENSG00000162688.11699.13410874.94120-0.323603.003302.25840HepG2HNRNPF
AGLENSG00000162688.11863.795901119.28400-0.373803.286302.55650HepG2HNRNPL
AGLENSG00000162688.11702.28000927.03130-0.400604.542603.78200HepG2HNRNPU
AGLENSG00000162688.11676.69350861.56670-0.348502.772502.04730HepG2IGF2BP1
AGLENSG00000162688.11772.01710946.93190-0.294603.037502.27220HepG2ILF2
AGLENSG00000162688.111052.41180717.868800.551806.337405.16060HepG2MSI2
AGLENSG00000162688.11906.302801218.30920-0.426803.201702.38420HepG2NOL12
AGLENSG00000162688.11754.79780917.60300-0.281802.432101.63370HepG2PARN
AGLENSG00000162688.111271.90180940.812400.434902.254801.31480HepG2PCBP2
AGLENSG00000162688.11619.50890826.83800-0.416504.113203.23190HepG2PPIL4
AGLENSG00000162688.111009.95840846.583800.254502.173201.67730HepG2PTBP1
AGLENSG00000162688.11776.907701162.90870-0.581907.059106.16350HepG2PUF60
AGLENSG00000162688.111260.20690916.871500.458805.305704.48140HepG2QKI
AGLENSG00000162688.111819.062501278.558300.508608.206707.42400HepG2RBM22
AGLENSG00000162688.111261.54450832.119700.600203.291802.56220HepG2RBM25
AGLENSG00000162688.111267.79850942.166700.428205.495004.77480HepG2NELFE
AGLENSG00000162688.11691.48230942.53520-0.446903.810303.02940HepG2RPLP0
AGLENSG00000162688.11511.69210825.56270-0.6901011.1923010.03330HepG2SAFB2
AGLENSG00000162688.111122.86600881.403300.349203.715703.04490HepG2SF3B4
AGLENSG00000162688.111676.030101444.088400.214802.291101.82120HepG2SRFBP1
AGLENSG00000162688.11711.62420859.60290-0.272602.297401.65850HepG2SRSF7
AGLENSG00000162688.11891.27590748.464100.251802.034901.54720HepG2SRSF9
AGLENSG00000162688.111490.647101253.817300.249502.765902.25310HepG2SSB
AGLENSG00000162688.111548.692201305.793800.246001.964101.42320HepG2SUCLG1
AGLENSG00000162688.111146.27720826.926300.471005.718704.96300HepG2TAF15
AGLENSG00000162688.11568.91960900.78620-0.663008.609607.81680HepG2TIAL1
AGLENSG00000162688.11707.37810908.83640-0.361503.879103.23410HepG2TRIM56
AGLENSG00000162688.111213.98220758.644300.678207.633606.59330HepG2U2AF1
AGLENSG00000162688.11352.30280549.06940-0.640203.558402.70100HepG2UCHL5
AGLENSG00000162688.11478.02420851.21900-0.832403.105502.04190HepG2UPF2
AGLENSG00000162688.11842.820701014.25570-0.267102.497901.92330HepG2UTP3
AGLENSG00000162688.111347.22450998.475600.432102.354101.37710HepG2XRCC6
AGLENSG00000162688.11477.06690914.88850-0.939409.834808.48620HepG2XRN2
AGLENSG00000162688.11833.46880651.489300.355303.678902.92250HepG2ZC3H8
AGLENSG00000162688.111203.792301677.23640-0.478508.190807.28530K562AGGF1
AGLENSG00000162688.111374.175001842.96080-0.423504.336203.04490K562AKAP8
AGLENSG00000162688.111442.449101745.22360-0.274902.076801.50830K562AKAP8L
AGLENSG00000162688.111516.272402334.15750-0.622408.573807.63260K562AQR
AGLENSG00000162688.111590.740902064.72410-0.376305.514003.90930K562CPEB4
AGLENSG00000162688.112499.729702136.702500.226302.619401.98320K562DDX47
AGLENSG00000162688.11914.751601208.16260-0.401404.666502.82680K562DDX6
AGLENSG00000162688.111382.536001878.09130-0.442006.852305.37170K562DKC1
AGLENSG00000162688.111314.413501682.49590-0.356204.448603.56400K562EIF2S2
AGLENSG00000162688.11903.567701244.95620-0.462404.529903.48030K562EIF4A3
AGLENSG00000162688.11864.460901121.12210-0.375103.953002.52980K562EIF4B
AGLENSG00000162688.11860.175501086.70100-0.337302.833801.52580K562EWSR1
AGLENSG00000162688.111135.383401617.41860-0.510505.491104.27380K562FIP1L1
AGLENSG00000162688.111028.78930799.299900.364002.323201.30130K562FKBP4
AGLENSG00000162688.111323.840701712.46630-0.371303.560701.89700K562G3BP1
AGLENSG00000162688.111694.509801240.912300.449402.913402.18450K562G3BP2
AGLENSG00000162688.11842.205101075.00850-0.352102.682401.89910K562GPKOW
AGLENSG00000162688.111432.928802242.17700-0.6459010.139308.66790K562GRSF1
AGLENSG00000162688.11417.77430920.76220-1.1401018.8510017.36980K562HNRNPC
AGLENSG00000162688.111386.389901930.93780-0.478005.808904.22120K562HNRNPL
AGLENSG00000162688.111462.768302192.94680-0.584207.428106.14010K562HSPD1
AGLENSG00000162688.111304.924401790.54700-0.456403.316502.15780K562IGF2BP2
AGLENSG00000162688.111409.716801882.48530-0.417204.512003.43130K562MAGOH
AGLENSG00000162688.111285.879901772.94180-0.463404.358202.91730K562MAK16
AGLENSG00000162688.111542.100301878.77130-0.284902.454001.58960K562MATR3
AGLENSG00000162688.111564.277502074.89850-0.407504.450403.24420K562MBNL1
AGLENSG00000162688.11636.41110906.53950-0.510403.643301.92370K562NUSAP1
AGLENSG00000162688.111402.706601839.79800-0.391304.324102.60690K562PCBP1
AGLENSG00000162688.11957.936101836.01750-0.9386016.0938013.57010K562PPIG
AGLENSG00000162688.11487.96910825.55280-0.758607.808006.13580K562PSIP1
AGLENSG00000162688.112030.774102895.10400-0.511605.918004.72980K562PUF60
AGLENSG00000162688.112534.508503017.21610-0.251502.566201.63950K562PUM2
AGLENSG00000162688.111373.430801730.90370-0.333702.775502.23180K562PUS1
AGLENSG00000162688.111291.843901686.40480-0.384504.693603.94160K562RBM15
AGLENSG00000162688.111273.139301754.07470-0.462303.739802.75000K562RBM22
AGLENSG00000162688.111215.409001637.17450-0.429805.824704.67500K562SF3A3
AGLENSG00000162688.11859.684101290.87950-0.586508.102206.59520K562SF3B4
AGLENSG00000162688.11475.93540713.99420-0.585104.798803.33600K562SRFBP1
AGLENSG00000162688.11861.918301792.85490-1.0566019.4953017.62330K562SRSF1
AGLENSG00000162688.111318.066901693.02450-0.361203.071101.95240K562SRSF5
AGLENSG00000162688.111191.462401814.65320-0.607006.465305.34150K562TARDBP
AGLENSG00000162688.111337.577601750.39410-0.388103.632202.67470K562TIA1
AGLENSG00000162688.111277.503201717.26160-0.426804.146002.76410K562TRA2A
AGLENSG00000162688.11586.78290843.53520-0.523604.402703.14770K562TRIM56
AGLENSG00000162688.111435.533801759.18500-0.293303.819102.98750K562UPF1
AGLENSG00000162688.112070.366402629.58950-0.345003.340802.38120K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AGL is not available on ENCORE database.





6 RBPs can affect the splicing of AGL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAGLENSG00000162688.11chr1+100345478100345602100343196100343384100346187100346351-0.303000.000230.00625excludedK562SRSF1
SEAGLENSG00000162688.11chr1+100340709100340812100340242100340366100342013100342153-0.237000.000740.01086excludedHepG2U2AF2
SEAGLENSG00000162688.11chr1+100336313100336425100335955100336137100340242100340366-0.083000.006180.07305excludedK562PUS1
SEAGLENSG00000162688.11chr1+100340709100340812100340242100340366100340913100341011-0.075000.005420.09723excludedK562RBM15
SEAGLENSG00000162688.11chr1+1003181161003182591003165301003166801003270581003272690.351000.000010.00062includedHepG2HNRNPC
SEAGLENSG00000162688.11chr1+100345478100345602100343196100343384100346187100346351-0.371000.003180.09235excludedHepG2HNRNPC
A3SSAGLENSG00000162688.11chr1+1003431771003433841003431961003433841003420131003421530.075000.005820.03304longerK562AQR
A3SSAGLENSG00000162688.11chr1+1003277881003279791003278121003279791003267651003272690.076000.001060.00733longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AGL is not avaliable on ENCORE database.