ZMYND19

General Information

Gene Name       : ZMYND19
Gene ID             : ENSG00000165724.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZMYND19)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZMYND19ENSG00000165724.53.9013.418.65ENCSR000AEF
HepG2ZMYND19ENSG00000165724.529.1317.3523.24ENCSR985KAT
K562ZMYND19ENSG00000165724.532.0322.6027.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZMYND19 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZMYND19 RNA is bound by 25 proteins.  







eCLIP assay for ZMYND19 is not avaliable on ENCORE database.





25 proteins are bound to ZMYND19 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9140476572140476727-3'-UTR,intron-Distal3.878726.10933HepG2UPF1
chr9140476673140476728-3'-UTR,intron-Distal3.022955.79185K562TIA1
chr9140476583140476733-3'-UTR,intron-Distal3.5272212.48610K562DDX6
chr9140476586140476735-3'-UTR,intron-Distal5.5310317.53659K562PABPC4
chr9140476648140476752-3'-UTR,intron-Distal5.0770923.81948K562PUM2
chr9140476681140476738-3'-UTR,intron-Distal4.748587.70612K562DDX55
chr9140476626140476735-3'-UTR,intron-Distal3.428503.37451K562APOBEC3C
chr9140476609140476682-3'-UTR,intron-Distal3.551074.50192K562FAM120A
chr9140476682140476733-3'-UTR,intron-Distal6.0860218.38217HepG2TIA1
chr9140476637140476756-3'-UTR,intron-Distal4.603114.46422K562UPF1
chr9140484885140484936-5'-UTR,intron-Distal4.289884.82666HepG2DDX3X
chr9140484664140484756-5'-UTR,CDS,intron-Distal3.361208.50482K562DDX3X
chr9140484708140484861-5'-UTR,CDS,intron-Distal4.2346310.68796HepG2DDX3X
chr9140484756140484854-5'-UTR,intron-Distal3.841134.84938K562DDX3X
chr9140481518140481591-CDS,intron-Distal,intron-Proximal4.176734.00320K562AQR
chr9140483156140483228-CDS,intron-Distal,intron-Proximal4.437686.59856K562SF3B4
chr9140481513140481575-CDS,intron-Distal,intron-Proximal3.729437.55042HepG2PPIG
chr9140481517140481614-CDS,intron-Distal,intron-Proximal3.957046.43894HepG2SF3A3
chr9140482239140482292-CDS,intron-Distal,intron-Proximal5.105188.03975K562BUD13
chr9140482107140482200-CDS,intron-Distal,intron-Proximal4.8918014.79390HepG2PRPF8
chr9140482159140482275-CDS,intron-Distal,intron-Proximal3.059624.88466K562UCHL5
chr9140477434140477515-CDS,intron-Distal,intron-Proximal4.213473.25521K562LIN28B
chr9140483087140483115-CDS,intron-Distal,intron-Proximal4.018348.29266K562AQR
chr9140484627140484667-CDS,intron-Distal4.376004.27476HepG2AQR
chr9140481418140481496-CDS,intron-Distal,intron-Proximal3.778407.91657HepG2PPIG
chr9140483036140483148-CDS,intron-Distal,intron-Proximal4.8729615.45776HepG2PRPF8
chr9140482227140482276-CDS,intron-Distal,intron-Proximal3.091935.41373HepG2PPIG
chr9140482238140482289-CDS,intron-Distal,intron-Proximal3.497273.02321K562U2AF2
chr9140482162140482227-CDS,intron-Distal,intron-Proximal4.443267.79455HepG2PPIG
chr9140481986140482039-intron-Distal3.559684.35635K562PRPF8
chr9140480867140480950-intron-Distal4.365516.85458K562PTBP1
chr9140482125140482133-intron-Distal,intron-Proximal5.284597.28294K562AQR
chr9140482072140482151-intron-Distal,intron-Proximal3.144083.34231K562RBM15
chr9140483044140483087-intron-Distal,intron-Proximal5.6638110.48996K562AQR
chr9140482151140482169-intron-Distal,intron-Proximal4.264275.97994K562AQR
chr9140481814140481895-intron-Distal3.888925.25185K562PRPF8
chr9140482133140482151-intron-Distal,intron-Proximal4.234825.97994K562AQR
chr9140482980140483055-intron-Distal,intron-Proximal4.056136.35873K562PRPF8
chr9140483025140483094-intron-Distal,intron-Proximal3.524574.79829K562EFTUD2
chr9140484474140484582-intron-Distal4.4289511.42156HepG2EFTUD2
chr9140481118140481166-intron-Distal4.082574.17531HepG2RBFOX2
chr9140478098140478157-intron-Distal3.933453.06347K562NONO
chr9140484494140484598-intron-Distal4.540355.19274K562XRN2
chr9140481681140481818-intron-Distal3.230544.95606HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZMYND19 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZMYND19 is not available on ENCORE database.

  • 74 RBPs can affect the levels of ZMYND19.  








The Knockdown/knockout RNA-Seq assay for ZMYND19 is not available on ENCORE database.





74 RBPs can affect the gene expression of ZMYND19 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZMYND19ENSG00000165724.5416.39520318.523700.386501.932201.42470HepG2BOP1
ZMYND19ENSG00000165724.5197.44920292.42130-0.566602.788402.09880HepG2CPSF6
ZMYND19ENSG00000165724.597.44190206.57830-1.084105.644904.07230HepG2AGO1
ZMYND19ENSG00000165724.5210.22230293.25140-0.480202.020201.50430HepG2EIF2S1
ZMYND19ENSG00000165724.5248.04520386.73960-0.640803.087502.21250HepG2EIF4G1
ZMYND19ENSG00000165724.5161.06160292.92410-0.862902.655801.66150HepG2FTO
ZMYND19ENSG00000165724.5224.79730360.23520-0.680304.961603.76910HepG2HNRNPA2B1
ZMYND19ENSG00000165724.5463.41440307.343400.592403.723002.92170HepG2HNRNPK
ZMYND19ENSG00000165724.5189.20980316.33780-0.741504.162003.40520HepG2HNRNPLL
ZMYND19ENSG00000165724.5500.93920388.635300.366102.661401.91400HepG2NOL12
ZMYND19ENSG00000165724.5591.39040393.878400.586307.656406.77250HepG2PUM1
ZMYND19ENSG00000165724.5314.92820435.95940-0.469202.908302.03020HepG2RBM15
ZMYND19ENSG00000165724.5416.04310258.307400.687503.035401.99610HepG2RBM27
ZMYND19ENSG00000165724.5306.67760195.063600.652702.992601.38800HepG2RBM47
ZMYND19ENSG00000165724.5260.14050401.37550-0.625704.197303.38310HepG2RPLP0
ZMYND19ENSG00000165724.5700.23140417.553100.745803.043702.33610HepG2SF3A3
ZMYND19ENSG00000165724.5312.04880227.963500.452902.717102.07730HepG2SMN1
ZMYND19ENSG00000165724.5221.30770348.39100-0.654702.712301.93870HepG2SNRNP70
ZMYND19ENSG00000165724.5359.38350534.57570-0.572905.754405.10520HepG2SRFBP1
ZMYND19ENSG00000165724.5253.70640366.04440-0.528903.844603.04410HepG2SRSF7
ZMYND19ENSG00000165724.5500.39390416.619100.264201.875701.34510HepG2SUCLG1
ZMYND19ENSG00000165724.5290.16190215.209800.431002.408001.87470HepG2TRIM56
ZMYND19ENSG00000165724.5244.50580370.30500-0.598804.842403.95940HepG2UPF1
ZMYND19ENSG00000165724.5485.82750357.516100.442303.213102.57630HepG2UTP3
ZMYND19ENSG00000165724.5122.67000205.17110-0.742004.136603.34020HepG2ZC3H8
ZMYND19ENSG00000165724.5690.00910980.82640-0.507404.450302.87240K562ABCF1
ZMYND19ENSG00000165724.51180.35690615.744100.9387021.5607020.08650K562AGGF1
ZMYND19ENSG00000165724.5921.63430676.598300.445803.750702.56820K562AKAP8
ZMYND19ENSG00000165724.5942.28930640.706900.556405.409704.47920K562AKAP8L
ZMYND19ENSG00000165724.5810.064901022.35730-0.335802.218501.68350K562AQR
ZMYND19ENSG00000165724.5852.39290672.250400.342402.916401.98010K562ATP5C1
ZMYND19ENSG00000165724.5301.23250501.96690-0.736705.641604.38610K562BOP1
ZMYND19ENSG00000165724.5673.530101065.72910-0.662003.848802.55670K562CNOT7
ZMYND19ENSG00000165724.5359.86160533.74820-0.568704.402903.41630K562CPSF6
ZMYND19ENSG00000165724.51317.233901596.65960-0.277502.284401.39830K562CELF1
ZMYND19ENSG00000165724.51184.94430967.630200.292203.045602.36560K562DDX47
ZMYND19ENSG00000165724.5963.55340689.464100.482805.797304.46880K562DKC1
ZMYND19ENSG00000165724.5748.45280945.88830-0.337803.182602.41940K562EIF2S2
ZMYND19ENSG00000165724.5403.92500284.447900.505803.653802.74820K562EIF3G
ZMYND19ENSG00000165724.5313.45290543.05030-0.792807.178105.76810K562FMR1
ZMYND19ENSG00000165724.5284.73470460.27290-0.692904.767903.53570K562FTO
ZMYND19ENSG00000165724.5930.61220502.727000.8883015.9493014.60480K562FXR1
ZMYND19ENSG00000165724.5118.34560221.78360-0.906104.452103.51110K562G3BP2
ZMYND19ENSG00000165724.5357.02730509.60890-0.513403.411202.53230K562GPKOW
ZMYND19ENSG00000165724.5327.54420777.97570-1.2480019.9452018.42280K562HNRNPC
ZMYND19ENSG00000165724.5529.93340694.75250-0.390702.611701.50510K562HNRNPF
ZMYND19ENSG00000165724.5872.93210579.826600.590104.575303.35410K562HNRNPM
ZMYND19ENSG00000165724.5755.63230955.86220-0.339102.295201.56570K562HSPD1
ZMYND19ENSG00000165724.5620.48060405.341900.614103.357102.18650K562IGF2BP2
ZMYND19ENSG00000165724.5922.47640679.959900.440003.440002.50800K562KIF1C
ZMYND19ENSG00000165724.5215.56010435.11440-1.013307.146605.57050K562KRR1
ZMYND19ENSG00000165724.5521.26810753.42660-0.531404.489602.66260K562LARP7
ZMYND19ENSG00000165724.5573.74520425.780400.430203.025602.14630K562MAGOH
ZMYND19ENSG00000165724.51048.61510761.725500.461004.301603.12270K562MBNL1
ZMYND19ENSG00000165724.51018.270901384.16790-0.442903.898202.56170K562MSI2
ZMYND19ENSG00000165724.5772.45950533.913600.532803.117202.17250K562NAA15
ZMYND19ENSG00000165724.5467.44160675.30360-0.530803.616702.66480K562PCBP3
ZMYND19ENSG00000165724.5407.95010517.96610-0.344502.093401.39670K562POLR2G
ZMYND19ENSG00000165724.5637.75200413.688600.624406.321505.35180K562PTBP1
ZMYND19ENSG00000165724.51103.68580635.425500.796409.678108.71190K562PUS1
ZMYND19ENSG00000165724.51033.63180619.109800.7394011.4626010.27130K562RBM15
ZMYND19ENSG00000165724.5565.44990396.558900.511803.780002.78550K562RBM22
ZMYND19ENSG00000165724.5477.85360636.44250-0.413503.072202.02100K562RCC2
ZMYND19ENSG00000165724.5335.86470477.18580-0.506703.203101.63860K562SDAD1
ZMYND19ENSG00000165724.5312.92570484.61720-0.631003.879502.71490K562SF3B1
ZMYND19ENSG00000165724.5356.21700230.530900.627704.537903.43320K562SF3B4
ZMYND19ENSG00000165724.5558.56110405.577200.461603.318102.54820K562SRSF1
ZMYND19ENSG00000165724.5714.34250925.03960-0.372902.613101.30230K562SSRP1
ZMYND19ENSG00000165724.5571.98350846.10170-0.564904.609702.92050K562STAU1
ZMYND19ENSG00000165724.5125.83860217.69970-0.790802.871401.37500K562TAF15
ZMYND19ENSG00000165724.5609.28910410.417900.569904.362903.46740K562TARDBP
ZMYND19ENSG00000165724.5536.06230395.908200.437103.001102.14300K562TIA1
ZMYND19ENSG00000165724.5387.62810670.91570-0.791503.091602.09840K562TIAL1
ZMYND19ENSG00000165724.5533.84470388.628600.457902.979401.83720K562TRA2A
ZMYND19ENSG00000165724.5625.35370824.88490-0.399502.839401.43390K562TRIP6
ZMYND19ENSG00000165724.5924.578501168.42720-0.337703.661202.18870K562TROVE2
ZMYND19ENSG00000165724.5332.38670483.76260-0.541403.559202.39380K562UCHL5
ZMYND19ENSG00000165724.5752.851801006.80300-0.419302.444601.76790K562UPF1
ZMYND19ENSG00000165724.5604.45920861.50530-0.511203.010102.09920K562WDR3
ZMYND19ENSG00000165724.5739.399501151.86050-0.639504.662903.49860K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZMYND19 is not available on ENCORE database.





2 RBPs can affect the splicing of ZMYND19 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZMYND19ENSG00000165724.5chr9-1404838551404840241404831101404831701404846641404849420.206000.002470.02610includedK562AQR
A3SSZMYND19ENSG00000165724.5chr9-1404831101404833551404831101404831701404846641404849420.321000.000000.00038longerK562AGGF1
A3SSZMYND19ENSG00000165724.5chr9-1404814181404815851404814181404815591404821681404822750.071000.014850.07413longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZMYND19 is not avaliable on ENCORE database.