TNFRSF10A

General Information

Gene Name       : TNFRSF10A
Gene ID             : ENSG00000104689.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TNFRSF10A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TNFRSF10AENSG00000104689.99.759.619.68ENCSR000AEF
HepG2TNFRSF10AENSG00000104689.95.975.025.49ENCSR985KAT
K562TNFRSF10AENSG00000104689.918.1916.5617.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TNFRSF10A is not avaliable on ENCORE database.



Proteins bound to RNA
  • TNFRSF10A RNA is bound by 12 proteins.  







eCLIP assay for TNFRSF10A is not avaliable on ENCORE database.





12 proteins are bound to TNFRSF10A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr82304900823049048-3'-UTR,intron-Distal4.141693.54010K562UPF1
chr82304814923048239-3'-UTR,intron-Distal4.413693.97054K562IGF2BP1
chr82305819823058256-CDS,intron-Distal,intron-Proximal3.570804.06757K562UCHL5
chr82308223223082291-CDS,intron-Distal4.909044.02817HepG2PRPF8
chr82305457323054646-CDS,intron-Distal,intron-Proximal4.153076.39176K562AQR
chr82305927623059322-CDS,intron-Distal,intron-Proximal4.860594.65563K562AQR
chr82305677723056838-CDS,intron-Distal,intron-Proximal3.652154.12428HepG2SND1
chr82304942223049505-CDS,intron-Distal3.903974.08796K562SND1
chr82305741723057490-CDS,intron-Distal,intron-Proximal4.092856.86590K562SF3B4
chr82305804023058080-CDS,intron-Distal4.274684.24959K562SND1
chr82305467923054719-CDS,intron-Distal,intron-Proximal4.806095.54337HepG2SND1
chr82305814423058265-CDS,intron-Distal,intron-Proximal3.398693.86355HepG2PPIG
chr82306043223060509-intron-Distal4.546346.58261K562KHSRP
chr82305902123059261-intron-Distal,intron-Proximal3.271893.72310K562HNRNPK
chr82305729423057399-intron-Distal,intron-Proximal4.805338.52787K562AQR
chr82307841623078578-intron-Distal4.926126.93487K562ILF3
chr82306454523064612-intron-Distal4.684415.83754K562HNRNPM
chr82307914823079262-intron-Distal3.042583.75642K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TNFRSF10A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TNFRSF10A is not available on ENCORE database.

  • 86 RBPs can affect the levels of TNFRSF10A.  








The Knockdown/knockout RNA-Seq assay for TNFRSF10A is not available on ENCORE database.





86 RBPs can affect the gene expression of TNFRSF10A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TNFRSF10AENSG00000104689.5330.47460203.015900.702805.776204.96060HepG2ACO1
TNFRSF10AENSG00000104689.5521.91320225.541501.2103010.690909.71210HepG2AKAP1
TNFRSF10AENSG00000104689.5270.11430203.997800.404901.995601.33000HepG2AKAP8L
TNFRSF10AENSG00000104689.5720.00100251.571401.5169025.2161023.70480HepG2BOP1
TNFRSF10AENSG00000104689.5305.46860139.155701.134209.790008.47190HepG2CALR
TNFRSF10AENSG00000104689.5295.86770203.005500.543303.547702.81010HepG2CKAP4
TNFRSF10AENSG00000104689.5317.05000169.818400.900604.460903.48590HepG2CNOT7
TNFRSF10AENSG00000104689.5170.1672097.071100.809703.634802.41490HepG2CSTF2
TNFRSF10AENSG00000104689.5462.60260207.561701.1561015.8949014.60330HepG2CELF1
TNFRSF10AENSG00000104689.5222.35170128.436700.791703.552302.79130HepG2DDX21
TNFRSF10AENSG00000104689.5366.48710216.061500.762204.691603.89470HepG2DDX3X
TNFRSF10AENSG00000104689.5280.39500154.484300.859904.457603.49930HepG2DDX55
TNFRSF10AENSG00000104689.5247.58170173.185200.515502.247801.33540HepG2DDX5
TNFRSF10AENSG00000104689.5273.93790185.578100.561702.349901.77670HepG2DDX6
TNFRSF10AENSG00000104689.5190.18540118.247000.685502.619101.54620HepG2AGO1
TNFRSF10AENSG00000104689.5194.38600113.307400.778603.329702.34330HepG2EIF3D
TNFRSF10AENSG00000104689.5123.83800191.97120-0.632401.997201.40650HepG2EIF4B
TNFRSF10AENSG00000104689.5504.08260342.166400.558905.257404.47570HepG2ETF1
TNFRSF10AENSG00000104689.5391.26590222.658000.813204.814503.82200HepG2FIP1L1
TNFRSF10AENSG00000104689.5379.93000187.595401.018008.099607.00650HepG2IGF2BP2
TNFRSF10AENSG00000104689.5358.83050176.024801.027403.233002.16770HepG2IGF2BP3
TNFRSF10AENSG00000104689.5359.41100242.676100.566502.592701.79030HepG2LARP4
TNFRSF10AENSG00000104689.5361.90380198.992400.862805.875004.92990HepG2MAGOH
TNFRSF10AENSG00000104689.5292.35990204.829800.513202.186101.62110HepG2NCBP2
TNFRSF10AENSG00000104689.5364.45150155.203101.231507.679606.14850HepG2PABPC1
TNFRSF10AENSG00000104689.5264.93990182.434700.538202.362101.69060HepG2PABPC4
TNFRSF10AENSG00000104689.5282.06410204.874900.461202.387101.81450HepG2PCBP1
TNFRSF10AENSG00000104689.5260.80860152.281900.776103.384201.69540HepG2PNPT1
TNFRSF10AENSG00000104689.5248.83170119.200301.061706.270105.10720HepG2PRPF8
TNFRSF10AENSG00000104689.5306.07880224.252600.448702.776102.18230HepG2PUM1
TNFRSF10AENSG00000104689.5296.41700224.086700.403501.891001.33060HepG2PUM2
TNFRSF10AENSG00000104689.5123.94210206.78980-0.738504.300103.56300HepG2PUS1
TNFRSF10AENSG00000104689.5727.13020285.991901.3461026.0658024.80010HepG2RBM22
TNFRSF10AENSG00000104689.5163.36360232.00160-0.506002.304601.80140HepG2NELFE
TNFRSF10AENSG00000104689.5535.76050303.370100.820404.195003.38120HepG2RPLP0
TNFRSF10AENSG00000104689.5283.88250110.248601.3644011.5708010.41880HepG2RPS19
TNFRSF10AENSG00000104689.5278.87770134.252801.054606.791405.57320HepG2RPS2
TNFRSF10AENSG00000104689.5228.57350137.043200.737903.398702.20580HepG2RPS5
TNFRSF10AENSG00000104689.5236.26950117.916501.002605.263404.21110HepG2RRP9
TNFRSF10AENSG00000104689.5392.05090240.500500.704903.867103.06360HepG2SF3A3
TNFRSF10AENSG00000104689.5247.46080171.114600.532101.853301.30930HepG2SMN1
TNFRSF10AENSG00000104689.5615.25830275.182701.160702.747601.96940HepG2SNRNP70
TNFRSF10AENSG00000104689.5622.36090323.024500.9460014.6776013.76540HepG2SRFBP1
TNFRSF10AENSG00000104689.5337.40320226.545500.574603.242702.74170HepG2SRSF1
TNFRSF10AENSG00000104689.5529.39070208.580801.3436022.9350021.37660HepG2SRSF5
TNFRSF10AENSG00000104689.5315.12210184.299700.773806.386305.60940HepG2SRSF9
TNFRSF10AENSG00000104689.5241.65690147.924000.708002.656001.47870HepG2SUB1
TNFRSF10AENSG00000104689.5458.83790237.210400.951707.931406.96820HepG2SUCLG1
TNFRSF10AENSG00000104689.5239.67380150.372300.672403.958902.84550HepG2SUPT6H
TNFRSF10AENSG00000104689.5299.90320153.794900.963405.507004.60470HepG2SUPV3L1
TNFRSF10AENSG00000104689.5158.22830261.71010-0.726002.267801.30220HepG2TBRG4
TNFRSF10AENSG00000104689.5187.70770103.088300.864503.907602.74490HepG2TFIP11
TNFRSF10AENSG00000104689.5394.83670160.079901.3024015.4632014.45200HepG2TIAL1
TNFRSF10AENSG00000104689.5294.19390206.386000.511302.603401.75760HepG2TUFM
TNFRSF10AENSG00000104689.5341.19310190.484700.840805.318704.46330HepG2U2AF1
TNFRSF10AENSG00000104689.5338.13790218.460000.630102.474801.68660HepG2UBE2L3
TNFRSF10AENSG00000104689.5284.66850213.288100.416402.221701.58500HepG2UPF1
TNFRSF10AENSG00000104689.5307.56550205.919900.578703.584002.91770HepG2UTP3
TNFRSF10AENSG00000104689.5283.42020180.341700.652104.481403.65840HepG2ZC3H8
TNFRSF10AENSG00000104689.5373.30990234.574800.670206.157405.42490HepG2ZNF622
TNFRSF10AENSG00000104689.5531.21230694.45910-0.386603.213102.60950K562AGGF1
TNFRSF10AENSG00000104689.5589.35070763.11420-0.372802.517001.58780K562AKAP8
TNFRSF10AENSG00000104689.5590.266001013.74130-0.780309.200908.23160K562AQR
TNFRSF10AENSG00000104689.5373.68620521.01440-0.479502.845401.96010K562BOP1
TNFRSF10AENSG00000104689.5825.37400988.61750-0.260402.294601.69230K562DDX47
TNFRSF10AENSG00000104689.5360.38750591.32090-0.714405.934904.56260K562EFTUD2
TNFRSF10AENSG00000104689.5665.85680870.92040-0.387303.798302.97800K562EIF2S2
TNFRSF10AENSG00000104689.5993.131801260.00270-0.343403.285102.26460K562EIF4G2
TNFRSF10AENSG00000104689.5342.50050477.79470-0.480302.719101.81190K562FTO
TNFRSF10AENSG00000104689.5694.86480528.191400.395602.711702.11180K562FXR1
TNFRSF10AENSG00000104689.5287.41540528.88520-0.879808.579107.17380K562GPKOW
TNFRSF10AENSG00000104689.5775.302801160.55410-0.582006.683205.50310K562GRSF1
TNFRSF10AENSG00000104689.5230.67830537.93320-1.2215015.0341013.72810K562HNRNPC
TNFRSF10AENSG00000104689.5466.67230628.48320-0.429502.379701.51920K562HNRNPM
TNFRSF10AENSG00000104689.5754.149401035.87810-0.457903.709902.79340K562HSPD1
TNFRSF10AENSG00000104689.5313.06440516.25810-0.721606.238804.89570K562METAP2
TNFRSF10AENSG00000104689.5501.48100872.21150-0.7985013.7777012.14520K562MTPAP
TNFRSF10AENSG00000104689.5784.73380969.07130-0.304403.390602.57230K562NSUN2
TNFRSF10AENSG00000104689.5300.37660803.67640-1.419802.419801.50710K562PABPN1
TNFRSF10AENSG00000104689.5434.44740617.53890-0.507304.310002.59570K562PCBP1
TNFRSF10AENSG00000104689.5429.59990562.11120-0.387902.321201.42980K562PCBP2
TNFRSF10AENSG00000104689.5537.47240753.69290-0.487803.254002.35110K562PCBP3
TNFRSF10AENSG00000104689.5440.77740578.13510-0.391402.545401.78000K562POLR2G
TNFRSF10AENSG00000104689.5684.15720867.40630-0.342402.167701.44580K562PPIG
TNFRSF10AENSG00000104689.5360.18160575.42230-0.675905.103104.08610K562PRPF8
TNFRSF10AENSG00000104689.5980.727401374.76860-0.487305.132304.02400K562PUF60
TNFRSF10AENSG00000104689.51171.495301432.75000-0.290402.653501.71310K562PUM2
TNFRSF10AENSG00000104689.5459.29390716.62380-0.641805.668504.92440K562PUS1
TNFRSF10AENSG00000104689.5321.89790586.16060-0.864706.895405.59310K562RPS19
TNFRSF10AENSG00000104689.5700.16770956.27660-0.449705.154704.06830K562SF3A3
TNFRSF10AENSG00000104689.5687.776701027.52960-0.579209.013307.80800K562UPF1
TNFRSF10AENSG00000104689.5570.77210777.06840-0.445103.813501.83280K562UPF2
TNFRSF10AENSG00000104689.5618.20120879.22020-0.508104.957603.76960K562WDR3
TNFRSF10AENSG00000104689.5732.54310914.31720-0.319803.259702.34850K562WDR43
TNFRSF10AENSG00000104689.5910.684801141.94110-0.326502.423601.62420K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TNFRSF10A is not available on ENCORE database.





2 RBPs can affect the splicing of TNFRSF10A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETNFRSF10AENSG00000104689.5chr8-230581992305827323058017230581132305932023059432-0.102000.003580.09580excludedK562PRPF8
SETNFRSF10AENSG00000104689.5chr8-230581992305827323058017230581132305932023059432-0.131000.000130.02664excludedK562RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TNFRSF10A is not avaliable on ENCORE database.