TMEM201

General Information

Gene Name       : TMEM201
Gene ID             : ENSG00000188807.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM201)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM201ENSG00000188807.120.992.521.75ENCSR000AEF
HepG2TMEM201ENSG00000188807.1211.632.637.13ENCSR985KAT
K562TMEM201ENSG00000188807.1217.396.9012.14ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM201 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM201 RNA is bound by 15 proteins.  







eCLIP assay for TMEM201 is not avaliable on ENCORE database.





15 proteins are bound to TMEM201 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr196747039674760+3'-UTR4.841455.45170HepG2AKAP1
chr196736529673704+3'-UTR4.928495.94150HepG2UPF1
chr196740289674126+3'-UTR4.8800011.61205HepG2AKAP1
chr196740489674139+3'-UTR3.7890711.30933K562UPF1
chr196744569674472+3'-UTR3.566184.95643K562AKAP1
chr196736279673687+3'-UTR4.013519.71169K562UPF1
chr196744539674467+3'-UTR4.5867417.66749K562UPF1
chr196739129673940+3'-UTR4.172053.34655HepG2AKAP1
chr196735569673620+3'-UTR5.525538.34384HepG2AKAP1
chr196737939673883+3'-UTR4.2993915.01187K562UPF1
chr196734949673524+3'-UTR4.430363.87385HepG2AKAP1
chr196733909673470+3'-UTR3.970123.15006K562RBM15
chr196737979673879+3'-UTR4.248068.02439K562AKAP1
chr196746999674785+3'-UTR4.8644112.07264HepG2UPF1
chr196744569674524+3'-UTR4.9565711.06991HepG2AKAP1
chr196732619673299+3'-UTR4.524754.40113HepG2AKAP1
chr196738089673882+3'-UTR5.9111514.37128HepG2UPF1
chr196735809673619+3'-UTR3.768383.66583K562AKAP1
chr196743489674401+3'-UTR5.413859.12015K562UPF1
chr196747079674789+3'-UTR4.672574.92659K562FAM120A
chr196737169673779+3'-UTR4.201165.63973HepG2AKAP1
chr196740429674140+3'-UTR6.0509315.92060HepG2UPF1
chr196735569673619+3'-UTR5.7464211.97438K562UPF1
chr196736439673712+3'-UTR5.587519.71345HepG2AKAP1
chr196733059673357+3'-UTR5.186507.92903HepG2UPF1
chr196739539674048+3'-UTR4.3802612.76076K562UPF1
chr196740199674108+3'-UTR4.668755.13929K562PCBP1
chr196735599673624+3'-UTR5.8511512.06927HepG2UPF1
chr196624329662517+3'-UTR,intron-Distal3.748563.17235HepG2HNRNPK
chr196744729674528+3'-UTR4.183427.82744K562AKAP1
chr196744759674513+3'-UTR4.1658412.42188HepG2UPF1
chr196747159674792+3'-UTR3.792686.89681K562PABPC4
chr196744679674545+3'-UTR4.3196321.10592K562UPF1
chr196744569674475+3'-UTR4.339019.87725HepG2UPF1
chr196734839673530+3'-UTR4.992866.45671HepG2UPF1
chr196737799673876+3'-UTR6.1950212.91326HepG2AKAP1
chr196489869649081+5'-UTR,CDS4.4554917.33964HepG2DDX3X
chr196568259656956+CDS,intron-Proximal4.539794.97857HepG2AQR
chr196570179657062+CDS3.297083.63681K562RBM15
chr196560579656177+CDS,intron-Distal,intron-Proximal5.461417.23718K562AQR
chr196699419670006+CDS,intron-Distal,intron-Proximal3.235874.22621HepG2PRPF8
chr196676499667798+CDS3.734197.47988HepG2PCBP2
chr196650599665107+intron-Distal4.198703.98553K562NONO
chr196679179667992+intron-Distal,intron-Proximal3.759135.32169K562EFTUD2
chr196510169651158+intron-Distal3.939023.06140HepG2NKRF
chr196652259665294+intron-Distal3.836053.69311HepG2CSTF2
chr196668389666909+intron-Distal4.094414.08332K562NONO
chr196561159656167+intron-Proximal4.401373.81597K562RBM15
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM201 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM201 is not available on ENCORE database.

  • 100 RBPs can affect the levels of TMEM201.  








The Knockdown/knockout RNA-Seq assay for TMEM201 is not available on ENCORE database.





100 RBPs can affect the gene expression of TMEM201 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM201ENSG00000188807.8721.60170435.956500.726905.557504.27160HepG2ABCF1
TMEM201ENSG00000188807.8266.22780107.530001.307803.550202.43680HepG2ADAR
TMEM201ENSG00000188807.8119.60760237.11860-0.987304.381503.43740HepG2CALR
TMEM201ENSG00000188807.8609.82410394.033800.630007.979106.96200HepG2CKAP4
TMEM201ENSG00000188807.8216.33820310.80550-0.522702.188601.56790HepG2CPSF6
TMEM201ENSG00000188807.8169.14930110.420800.615202.420101.33930HepG2DDX1
TMEM201ENSG00000188807.8196.86100108.270500.862403.843503.02560HepG2DNAJC21
TMEM201ENSG00000188807.8297.99200107.330301.4731018.4156016.87770HepG2DNAJC2
TMEM201ENSG00000188807.8152.96010230.41460-0.591102.685101.85730HepG2EIF4G1
TMEM201ENSG00000188807.8315.04780440.18990-0.482602.036801.37060HepG2FIP1L1
TMEM201ENSG00000188807.8109.35590257.56200-1.235909.680708.25970HepG2FUBP3
TMEM201ENSG00000188807.8541.83150280.479800.949808.547307.38730HepG2FXR1
TMEM201ENSG00000188807.8392.79460276.245500.507702.596601.73600HepG2G3BP2
TMEM201ENSG00000188807.8257.74670119.224501.112206.696004.50890HepG2HNRNPA0
TMEM201ENSG00000188807.8182.22550109.307900.737201.954001.39950HepG2HNRNPA1
TMEM201ENSG00000188807.8218.08670116.408800.905604.583302.76320HepG2HNRNPAB
TMEM201ENSG00000188807.8361.73060275.994400.390202.258601.60600HepG2HNRNPF
TMEM201ENSG00000188807.8275.01960212.703100.370602.013001.42620HepG2HNRNPL
TMEM201ENSG00000188807.8238.97410336.26090-0.492702.005901.46110HepG2HNRNPLL
TMEM201ENSG00000188807.8325.60450120.785901.4306017.4669016.04670HepG2HNRNPU
TMEM201ENSG00000188807.8355.32010271.775000.386602.044801.41620HepG2IGF2BP1
TMEM201ENSG00000188807.8311.04860134.329101.211308.952406.65970HepG2KHDRBS1
TMEM201ENSG00000188807.8482.14800280.578600.781003.355202.63300HepG2MAGOH
TMEM201ENSG00000188807.8601.51280282.118001.0922010.180409.02990HepG2MATR3
TMEM201ENSG00000188807.8590.05900288.738201.031009.720308.57460HepG2NCBP2
TMEM201ENSG00000188807.8320.75230231.556900.470002.084901.42080HepG2NOL12
TMEM201ENSG00000188807.8321.56210151.868201.082206.376804.20420HepG2NOLC1
TMEM201ENSG00000188807.8182.02680119.550700.606402.716801.87570HepG2PARN
TMEM201ENSG00000188807.8456.36810297.110600.619105.932705.09760HepG2PCBP1
TMEM201ENSG00000188807.8229.80880107.730401.092906.165005.09790HepG2PPIL4
TMEM201ENSG00000188807.8220.82630335.01310-0.601302.657801.89810HepG2PRPF4
TMEM201ENSG00000188807.8444.06630302.353100.554404.569603.90540HepG2PTBP1
TMEM201ENSG00000188807.8432.62740221.052900.968604.635703.88710HepG2PUF60
TMEM201ENSG00000188807.8496.60910234.671001.0814010.128509.14300HepG2PUM1
TMEM201ENSG00000188807.8378.83860234.491100.691902.327701.71080HepG2PUM2
TMEM201ENSG00000188807.8412.97150185.778201.152408.872607.08720HepG2RBM27
TMEM201ENSG00000188807.8241.15500136.054400.825703.853602.05100HepG2RBM47
TMEM201ENSG00000188807.8308.58200150.861601.032305.697604.17210HepG2RCC2
TMEM201ENSG00000188807.8529.22430336.463500.653306.526305.75450HepG2NELFE
TMEM201ENSG00000188807.8494.12340313.418100.656703.749503.04690HepG2RECQL
TMEM201ENSG00000188807.8373.50120171.309701.124408.217006.88410HepG2RPS2
TMEM201ENSG00000188807.8264.78020141.546000.903404.733503.68790HepG2RPS3A
TMEM201ENSG00000188807.8312.79050174.899100.838603.728302.47030HepG2RPS5
TMEM201ENSG00000188807.8231.68670107.562101.106908.786107.73550HepG2SAFB2
TMEM201ENSG00000188807.8231.95400133.286200.799203.811602.28210HepG2SART3
TMEM201ENSG00000188807.8351.18620124.148401.500104.982103.05560HepG2SF1
TMEM201ENSG00000188807.8768.75520525.316800.549203.344302.60110HepG2SF3A3
TMEM201ENSG00000188807.8443.70310314.731400.495403.796603.12180HepG2SF3B4
TMEM201ENSG00000188807.8316.28490120.690601.389803.994902.19440HepG2SFPQ
TMEM201ENSG00000188807.8313.88700211.983200.566204.105203.27420HepG2SLBP
TMEM201ENSG00000188807.8181.55090125.430300.533402.280101.68690HepG2SMN1
TMEM201ENSG00000188807.8317.05930569.37850-0.8446011.7288010.88800HepG2SRFBP1
TMEM201ENSG00000188807.8251.57210328.53480-0.385101.768501.36660HepG2SRSF1
TMEM201ENSG00000188807.8395.32380218.273800.856809.023007.97950HepG2SRSF5
TMEM201ENSG00000188807.8191.49000267.30070-0.481202.349401.83270HepG2SRSF9
TMEM201ENSG00000188807.8225.30130123.178700.871003.817202.50570HepG2STIP1
TMEM201ENSG00000188807.8525.69410248.223501.0825017.1480015.81120HepG2SUCLG1
TMEM201ENSG00000188807.8127.38660217.09260-0.769102.838502.15420HepG2SUPV3L1
TMEM201ENSG00000188807.8182.54460295.36470-0.694202.483101.94850HepG2TAF15
TMEM201ENSG00000188807.8224.28060117.346200.934405.836105.16080HepG2TIAL1
TMEM201ENSG00000188807.8261.53030118.416501.143005.301004.57200HepG2TRIM56
TMEM201ENSG00000188807.8512.97870215.981501.2479012.9189010.84730HepG2TUFM
TMEM201ENSG00000188807.8376.85370129.024501.546305.200403.81920HepG2U2AF2
TMEM201ENSG00000188807.8417.82210228.627600.869802.850202.00240HepG2UBE2L3
TMEM201ENSG00000188807.8230.24280128.216200.844503.924203.02030HepG2UCHL5
TMEM201ENSG00000188807.8611.60900449.784500.443304.008003.30640HepG2UTP3
TMEM201ENSG00000188807.8356.86220213.705000.739603.338002.54660HepG2XRN2
TMEM201ENSG00000188807.8400.49240512.37400-0.355402.807802.25820HepG2ZNF622
TMEM201ENSG00000188807.8413.37690177.686601.218004.404002.73010HepG2ZRANB2
TMEM201ENSG00000188807.8854.50930562.698600.602608.060107.16210K562AGGF1
TMEM201ENSG00000188807.81394.646101039.698200.423603.483102.08150K562APOBEC3C
TMEM201ENSG00000188807.8632.03350457.175300.467203.874602.26650K562BCCIP
TMEM201ENSG00000188807.8664.51730441.854600.588602.708201.75750K562BCLAF1
TMEM201ENSG00000188807.8747.81960488.757300.613505.757904.09430K562CCAR1
TMEM201ENSG00000188807.8484.36790335.212800.530903.890202.60880K562CSTF2
TMEM201ENSG00000188807.81093.613801449.12670-0.406102.180401.31630K562CELF1
TMEM201ENSG00000188807.8581.07660416.222800.481303.643002.42660K562DDX3X
TMEM201ENSG00000188807.81397.095901078.700200.373004.739203.91910K562DDX47
TMEM201ENSG00000188807.8794.38200497.131700.676103.787402.58840K562EIF3A
TMEM201ENSG00000188807.8685.73270446.118600.620103.451002.28410K562EIF3D
TMEM201ENSG00000188807.8360.40080171.016601.0754010.701509.13140K562EIF3G
TMEM201ENSG00000188807.8559.41760391.553900.514604.597703.04170K562EIF4B
TMEM201ENSG00000188807.81024.68260452.191701.1801026.8635025.10140K562FXR1
TMEM201ENSG00000188807.843.23690100.27820-1.213704.103203.20130K562G3BP2
TMEM201ENSG00000188807.8578.90020419.482400.464602.413901.36100K562HNRNPF
TMEM201ENSG00000188807.8641.45860952.69900-0.570705.081804.01610K562HSPD1
TMEM201ENSG00000188807.8474.55000218.448301.119202.881301.82870K562IGF2BP2
TMEM201ENSG00000188807.8182.61590329.00150-0.849304.664203.41440K562KRR1
TMEM201ENSG00000188807.8574.83310229.364801.325406.737505.39940K562MAGOH
TMEM201ENSG00000188807.8458.72230228.866701.003007.194105.61430K562MATR3
TMEM201ENSG00000188807.8914.34220696.103100.393303.505802.46450K562MBNL1
TMEM201ENSG00000188807.8887.658101103.26220-0.313703.934903.06360K562NSUN2
TMEM201ENSG00000188807.8290.09230204.038500.507602.197201.32970K562PCBP2
TMEM201ENSG00000188807.8754.15290222.858401.7586039.3648036.96840K562PTBP1
TMEM201ENSG00000188807.81109.578901367.71090-0.301802.886301.79640K562PUM1
TMEM201ENSG00000188807.8967.01490580.682300.735708.243707.35520K562PUS1
TMEM201ENSG00000188807.8747.34050565.774200.401402.720502.13160K562RBM15
TMEM201ENSG00000188807.8448.06010213.576701.068807.148705.72050K562RBM22
TMEM201ENSG00000188807.8363.70210208.286700.804105.740003.54880K562RBM34
TMEM201ENSG00000188807.8525.75010384.396900.451702.201701.32030K562RCC2
TMEM201ENSG00000188807.8359.80500224.782900.678604.493103.06280K562NELFE
TMEM201ENSG00000188807.81025.37790626.942900.709603.112101.96290K562SAFB
TMEM201ENSG00000188807.8292.40430104.210401.4884015.9063013.71410K562SF3B4
TMEM201ENSG00000188807.8659.62160376.618200.808403.417201.91230K562SFPQ
TMEM201ENSG00000188807.8462.28730218.499701.0811011.8098010.35560K562SRSF1
TMEM201ENSG00000188807.8379.58900233.917000.698304.549503.14250K562SRSF4
TMEM201ENSG00000188807.8371.12560206.416500.846202.793701.73930K562SRSF5
TMEM201ENSG00000188807.8612.32360921.97110-0.590405.396303.45420K562SSRP1
TMEM201ENSG00000188807.8491.99240221.083801.1539011.537709.93360K562TARDBP
TMEM201ENSG00000188807.8439.99860213.274001.0447011.202409.43450K562TIA1
TMEM201ENSG00000188807.8435.48460209.408801.0562010.347207.82410K562TRA2A
TMEM201ENSG00000188807.8662.353901000.97310-0.595706.919805.49600K562WDR3
TMEM201ENSG00000188807.8878.404901040.87200-0.244802.373601.58490K562WDR43
TMEM201ENSG00000188807.8634.15510423.354400.582902.686301.50140K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM201 is not available on ENCORE database.





2 RBPs can affect the splicing of TMEM201 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM201ENSG00000188807.8chr1+967056396708639667614966784796718109671948-0.367000.002170.02346excludedK562AQR
SETMEM201ENSG00000188807.8chr1+966989796699699667785966784796705639670863-0.259000.005250.09665excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM201 is not avaliable on ENCORE database.