TMEM144

General Information

Gene Name       : TMEM144
Gene ID             : ENSG00000164124.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM144)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM144ENSG00000164124.101.090.991.04ENCSR000AEF
HepG2TMEM144ENSG00000164124.105.198.496.84ENCSR985KAT
K562TMEM144ENSG00000164124.104.384.074.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM144 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM144 RNA is bound by 8 proteins.  







eCLIP assay for TMEM144 is not avaliable on ENCORE database.





8 proteins are bound to TMEM144 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr4159175619159175687+3'-UTR3.513833.38753K562FAM120A
chr4159136345159136416+CDS4.381363.89826HepG2BCLAF1
chr4159123174159123250+intron-Distal4.633529.55185HepG2HNRNPL
chr4159123283159123347+intron-Distal4.005613.82414HepG2HNRNPK
chr4159148737159148801+intron-Distal4.731794.74221HepG2PTBP1
chr4159123454159123529+intron-Distal3.9333912.57892HepG2HNRNPL
chr4159126150159126214+intron-Distal4.487404.66899HepG2HNRNPM
chr4159123915159123995+intron-Distal3.740344.79983HepG2U2AF2
chr4159123267159123349+intron-Distal3.987678.47057HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM144 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM144 is not available on ENCORE database.

  • 78 RBPs can affect the levels of TMEM144.  








The Knockdown/knockout RNA-Seq assay for TMEM144 is not available on ENCORE database.





78 RBPs can affect the gene expression of TMEM144 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM144ENSG00000164124.6507.20440367.497100.464704.061603.35080HepG2ACO1
TMEM144ENSG00000164124.6219.35970309.64870-0.497302.424901.48990HepG2ADAR
TMEM144ENSG00000164124.61233.80090441.673201.4820022.5321021.17440HepG2AKAP1
TMEM144ENSG00000164124.6548.75120369.172500.571805.751004.68130HepG2AKAP8L
TMEM144ENSG00000164124.6459.42730314.159400.548203.116501.62300HepG2ATP5C1
TMEM144ENSG00000164124.6685.01740506.375300.435803.894203.10500HepG2AUH
TMEM144ENSG00000164124.6433.84930304.902500.508703.008802.06950HepG2BCLAF1
TMEM144ENSG00000164124.6640.50340459.924900.477703.866702.97730HepG2CALR
TMEM144ENSG00000164124.6774.55220569.966900.442402.338101.44920HepG2CCAR1
TMEM144ENSG00000164124.6548.49900347.208700.659604.852103.84400HepG2CIRBP
TMEM144ENSG00000164124.6771.93870239.062001.6910018.0938016.19650HepG2CNOT7
TMEM144ENSG00000164124.6405.51110265.589200.610402.995801.56760HepG2CSTF2T
TMEM144ENSG00000164124.6250.99120339.85380-0.437303.015202.14720HepG2DDX19B
TMEM144ENSG00000164124.6622.37910286.663601.1183013.6235012.25640HepG2DDX21
TMEM144ENSG00000164124.6946.15220423.118201.1609015.3795014.02490HepG2DDX3X
TMEM144ENSG00000164124.6301.09550450.61740-0.581702.290101.40370HepG2DDX59
TMEM144ENSG00000164124.6250.86400377.28650-0.588803.520802.38640HepG2DDX5
TMEM144ENSG00000164124.6216.53550309.04740-0.513203.532702.81170HepG2DNAJC2
TMEM144ENSG00000164124.6335.16290517.62020-0.627004.705203.66090HepG2EIF4G2
TMEM144ENSG00000164124.6624.70420324.302300.945707.310505.56190HepG2FUS
TMEM144ENSG00000164124.6307.07620208.518100.558302.598501.73530HepG2GEMIN5
TMEM144ENSG00000164124.6587.51290449.856400.385101.945801.40280HepG2GPKOW
TMEM144ENSG00000164124.6269.16750350.81720-0.382202.277001.38440HepG2HDGF
TMEM144ENSG00000164124.6659.90030310.714501.086607.536105.17650HepG2HLTF
TMEM144ENSG00000164124.6267.56050369.64410-0.466302.888802.15750HepG2HNRNPF
TMEM144ENSG00000164124.6923.96480429.303801.1057015.2203013.91030HepG2HNRNPLL
TMEM144ENSG00000164124.6398.77070242.575600.717005.233403.97110HepG2HNRNPM
TMEM144ENSG00000164124.6589.07760367.376100.681105.219604.31860HepG2IGF2BP2
TMEM144ENSG00000164124.6482.45220355.296000.441303.813802.96680HepG2ILF2
TMEM144ENSG00000164124.61034.00880284.526301.8615043.6981041.17740HepG2MSI2
TMEM144ENSG00000164124.6631.60010437.773700.528702.544101.61860HepG2MTPAP
TMEM144ENSG00000164124.6340.75260238.936200.512002.753001.53930HepG2NAA15
TMEM144ENSG00000164124.6265.01350380.63990-0.522402.576801.85350HepG2NSUN2
TMEM144ENSG00000164124.6801.70430357.275201.1659014.9401013.30520HepG2PABPC4
TMEM144ENSG00000164124.6435.28950344.291700.338202.064301.32360HepG2PARN
TMEM144ENSG00000164124.6494.55880343.681200.525004.435403.77800HepG2PTBP1
TMEM144ENSG00000164124.6663.15640518.450800.355002.214301.67330HepG2PUF60
TMEM144ENSG00000164124.6458.35660550.35200-0.263901.877601.36900HepG2PUM1
TMEM144ENSG00000164124.6846.06460549.954000.621407.045105.99370HepG2PUM2
TMEM144ENSG00000164124.6555.04350374.310600.568306.072105.22310HepG2PUS1
TMEM144ENSG00000164124.6835.32380372.188801.1662020.9494019.46110HepG2QKI
TMEM144ENSG00000164124.6777.83470485.960800.678508.372207.58430HepG2RBM22
TMEM144ENSG00000164124.6331.81350227.918700.541802.915302.28710HepG2RPS19
TMEM144ENSG00000164124.6493.89030322.290200.615702.973701.39470HepG2RTF1
TMEM144ENSG00000164124.6484.17510309.757400.644306.727405.78870HepG2SAFB2
TMEM144ENSG00000164124.6348.98950497.10040-0.510404.665603.79150HepG2SLBP
TMEM144ENSG00000164124.6704.85540548.857700.360803.204202.67790HepG2SRFBP1
TMEM144ENSG00000164124.6725.62520373.468800.9581015.3808014.45820HepG2SRSF1
TMEM144ENSG00000164124.6384.54810511.88700-0.412703.185302.52130HepG2SRSF5
TMEM144ENSG00000164124.6262.10210363.14980-0.470402.825302.12220HepG2SRSF7
TMEM144ENSG00000164124.6415.63740303.844600.451903.387902.78980HepG2SRSF9
TMEM144ENSG00000164124.6866.55860582.163100.573808.383907.39970HepG2SUCLG1
TMEM144ENSG00000164124.6323.91720237.385500.448302.255301.40280HepG2SUPT6H
TMEM144ENSG00000164124.6429.22210335.713500.354402.022301.52990HepG2TAF15
TMEM144ENSG00000164124.6569.59810418.365000.445102.817402.08740HepG2TARDBP
TMEM144ENSG00000164124.6508.56360306.367000.731102.971901.86590HepG2TBRG4
TMEM144ENSG00000164124.6728.85710337.982301.1086018.3169017.23870HepG2TIAL1
TMEM144ENSG00000164124.6487.20520300.770600.695803.981803.23410HepG2U2AF1
TMEM144ENSG00000164124.6307.28760202.887800.598802.404601.69630HepG2UCHL5
TMEM144ENSG00000164124.6528.54470338.085200.644506.587005.72960HepG2UTP3
TMEM144ENSG00000164124.6525.17760291.317900.850105.308003.54850HepG2XRCC5
TMEM144ENSG00000164124.6616.36980325.822400.919606.995005.37480HepG2XRCC6
TMEM144ENSG00000164124.6951.57350385.130701.3049039.2655037.82820HepG2ZNF622
TMEM144ENSG00000164124.6220.18930400.68220-0.863705.976405.17050K562AQR
TMEM144ENSG00000164124.6455.93010589.63430-0.371002.564801.62640K562CELF1
TMEM144ENSG00000164124.6273.69750375.41060-0.455902.954002.28230K562DDX47
TMEM144ENSG00000164124.657.31190121.09700-1.079302.790901.78200K562EIF3A
TMEM144ENSG00000164124.6142.50760214.55380-0.590302.525701.76490K562EIF3G
TMEM144ENSG00000164124.6255.67290171.880000.572802.500301.43600K562FKBP4
TMEM144ENSG00000164124.6172.24620236.65830-0.458302.008201.47630K562FXR1
TMEM144ENSG00000164124.6224.59330326.94720-0.541702.450201.60870K562HNRNPU
TMEM144ENSG00000164124.6209.26850352.00560-0.750203.764902.67490K562MATR3
TMEM144ENSG00000164124.6216.76110313.84690-0.534002.317101.42610K562PCBP2
TMEM144ENSG00000164124.6244.31520161.870000.593802.350801.44080K562RCC2
TMEM144ENSG00000164124.6206.62970281.89910-0.448102.398701.51900K562SRPK2
TMEM144ENSG00000164124.6358.75980253.029300.503602.993002.08390K562WDR3
TMEM144ENSG00000164124.6194.13620263.10110-0.438502.369701.58190K562WDR43
TMEM144ENSG00000164124.6293.54210474.84910-0.693905.737503.87770K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM144 is not available on ENCORE database.





5 RBPs can affect the splicing of TMEM144 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM144ENSG00000164124.6chr4+159133212159133372159132684159132726159133759159133928-0.155000.004030.08156excludedHepG2HNRNPK
SETMEM144ENSG00000164124.6chr4+1591326101591327261591313451591317381591337591591339280.229000.000730.06012includedHepG2QKI
SETMEM144ENSG00000164124.6chr4+159156589159156657159154052159154134159158676159158795-0.239000.000910.09640excludedK562LARP4
SETMEM144ENSG00000164124.6chr4+1591332121591333721591326041591327261591337591591338500.413000.001420.08701includedHepG2TIAL1
SETMEM144ENSG00000164124.6chr4+1591332121591333721591326841591327261591337591591339280.252000.000250.01256includedK562HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM144 is not avaliable on ENCORE database.