TIPIN

General Information

Gene Name       : TIPIN
Gene ID             : ENSG00000075131.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIPIN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIPINENSG00000075131.945.3136.1240.72ENCSR000AEF
HepG2TIPINENSG00000075131.914.4126.0820.24ENCSR985KAT
K562TIPINENSG00000075131.944.8441.2943.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIPIN is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIPIN RNA is bound by 8 proteins.  







eCLIP assay for TIPIN is not avaliable on ENCORE database.





8 proteins are bound to TIPIN RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr156664515466645207-5'-UTR,CDS,intron-Distal4.171883.20027K562ZNF622
chr156664515266645203-5'-UTR,CDS,intron-Distal,intron-Proximal3.963303.32022K562UCHL5
chr156663960566639617-intron-Distal3.066337.24160HepG2SMNDC1
chr156663954666639564-intron-Distal7.54751400.00000HepG2DKC1
chr156663953766639546-intron-Distal7.26026156.45914K562SMNDC1
chr156663953966639553-intron-Distal5.15792400.00000HepG2SF3A3
chr156663954666639573-intron-Distal5.63149400.00000K562SMNDC1
chr156663954066639550-intron-Distal4.9551439.96823K562PTBP1
chr156663955466639577-intron-Distal3.99059400.00000HepG2NOLC1
chr156663955066639572-intron-Distal3.3077545.45760K562PTBP1
chr156663955366639572-intron-Distal4.73604400.00000HepG2SF3A3
chr156663957766639619-intron-Distal3.3762378.03284HepG2NOLC1
chr156663961566639620-intron-Distal6.78257400.00000HepG2DKC1
chr156663954166639550-intron-Distal5.9945950.33130K562ZRANB2
chr156663960866639613-intron-Distal6.48422400.00000HepG2DKC1
chr156663956466639575-intron-Distal7.32520400.00000HepG2DKC1
chr156663953966639554-intron-Distal6.9389868.62788HepG2NOLC1
chr156663962966639647-intron-Distal7.01229400.00000HepG2DKC1
chr156663955066639561-intron-Distal5.1971680.92358K562ZRANB2
chr156663953966639546-intron-Distal7.84846400.00000HepG2DKC1
chr156663956166639575-intron-Distal4.02541400.00000K562ZRANB2
chr156663964766639670-intron-Distal7.02583400.00000HepG2DKC1
chr156663953966639553-intron-Distal5.7932527.93625HepG2SMNDC1
chr156663957566639579-intron-Distal6.40459400.00000HepG2DKC1
chr156663954966639555-intron-Distal3.6079220.08396HepG2PTBP1
chr156663955366639581-intron-Distal4.4679726.78333HepG2SMNDC1
chr156663962066639629-intron-Distal6.95907400.00000HepG2DKC1
chr156663957966639606-intron-Distal6.31781400.00000HepG2DKC1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIPIN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIPIN is not available on ENCORE database.

  • 88 RBPs can affect the levels of TIPIN.  








The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.





88 RBPs can affect the gene expression of TIPIN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIPINENSG00000075131.5345.22960105.076401.7160014.4448013.32770HepG2AKAP1
TIPINENSG00000075131.5175.57540246.10150-0.487202.248701.61820HepG2AUH
TIPINENSG00000075131.5100.89170217.33250-1.107102.846101.89400HepG2BCCIP
TIPINENSG00000075131.567.80760188.89210-1.478004.383003.27510HepG2BCLAF1
TIPINENSG00000075131.5126.28670218.63860-0.791803.877503.18130HepG2BOP1
TIPINENSG00000075131.585.23880200.72710-1.235706.758105.71830HepG2CPSF6
TIPINENSG00000075131.5165.65950248.52930-0.585203.238702.44780HepG2DAZAP1
TIPINENSG00000075131.590.24940227.93870-1.336706.496905.02640HepG2DDX59
TIPINENSG00000075131.5155.6617091.903400.760102.762402.12350HepG2EIF4A3
TIPINENSG00000075131.5115.49220234.89160-1.024206.135404.94440HepG2EIF4G2
TIPINENSG00000075131.5207.81040282.55570-0.443302.273001.71940HepG2ETF1
TIPINENSG00000075131.578.49450201.06080-1.357004.539503.24690HepG2FTO
TIPINENSG00000075131.5163.3190092.654100.817703.202002.45900HepG2FXR1
TIPINENSG00000075131.5100.34910227.55350-1.181206.597205.63670HepG2GPKOW
TIPINENSG00000075131.563.25820118.73120-0.908402.783902.13520HepG2HNRNPA1
TIPINENSG00000075131.5112.99900258.52300-1.194005.808904.81900HepG2HNRNPF
TIPINENSG00000075131.565.58820217.15730-1.7272011.8079010.62290HepG2HNRNPLL
TIPINENSG00000075131.5137.7767081.159400.763402.534401.62290HepG2HNRNPM
TIPINENSG00000075131.595.92290254.57770-1.408207.172206.05530HepG2IGF2BP1
TIPINENSG00000075131.531.4606087.41890-1.474403.541202.78700HepG2IGF2BP2
TIPINENSG00000075131.5200.4060092.686101.112405.980605.02700HepG2MAGOH
TIPINENSG00000075131.5155.6275093.216600.739302.451501.85490HepG2MATR3
TIPINENSG00000075131.5101.65870221.44230-1.123204.861003.55290HepG2MTPAP
TIPINENSG00000075131.5161.8206095.422000.761902.797502.16120HepG2NCBP2
TIPINENSG00000075131.5163.38170246.44240-0.593003.066402.26410HepG2NOL12
TIPINENSG00000075131.587.46230192.54150-1.138405.393504.36530HepG2NSUN2
TIPINENSG00000075131.596.78440145.54750-0.588602.151001.46140HepG2PRPF4
TIPINENSG00000075131.5235.57500149.449000.656402.540401.36930HepG2PRPF6
TIPINENSG00000075131.572.16870164.95310-1.192603.186402.32530HepG2PRPF8
TIPINENSG00000075131.5151.2022089.115300.762602.986702.42190HepG2PTBP1
TIPINENSG00000075131.596.36710235.25740-1.287609.096408.10000HepG2PUF60
TIPINENSG00000075131.5175.56390249.55660-0.507402.247801.64040HepG2PUM2
TIPINENSG00000075131.5170.6638099.181300.782903.289502.71010HepG2NELFE
TIPINENSG00000075131.599.47980278.39680-1.484708.406507.31580HepG2RPLP0
TIPINENSG00000075131.582.52590134.76090-0.707502.134101.30370HepG2RPS10
TIPINENSG00000075131.5239.87680161.631900.569502.594501.55600HepG2RPS5
TIPINENSG00000075131.5102.99820214.95070-1.061405.809404.81930HepG2SF3B1
TIPINENSG00000075131.5150.40160225.59080-0.584902.973502.24880HepG2SLBP
TIPINENSG00000075131.5123.19570239.16750-0.957104.198203.22850HepG2SNRNP70
TIPINENSG00000075131.5120.92710266.73990-1.141309.397108.62380HepG2SRFBP1
TIPINENSG00000075131.5294.4736096.849001.6042015.9926015.05500HepG2SRSF1
TIPINENSG00000075131.5102.66650253.96810-1.306706.728705.72160HepG2SRSF7
TIPINENSG00000075131.5131.14940264.17170-1.010308.011607.04510HepG2SUCLG1
TIPINENSG00000075131.591.84930212.73220-1.211703.256002.52930HepG2SUPV3L1
TIPINENSG00000075131.586.02180211.62480-1.298707.921806.77750HepG2TARDBP
TIPINENSG00000075131.558.74010127.46750-1.117704.916804.28950HepG2TIAL1
TIPINENSG00000075131.567.95550128.62300-0.920504.096703.43810HepG2TRIM56
TIPINENSG00000075131.5155.33540229.84900-0.565302.397401.58810HepG2TUFM
TIPINENSG00000075131.579.61590178.52750-1.165002.655001.68750HepG2U2AF2
TIPINENSG00000075131.566.45800111.40670-0.745302.337401.68740HepG2UPF1
TIPINENSG00000075131.5249.53300107.557101.214009.716108.70400HepG2UTP3
TIPINENSG00000075131.5388.30080509.15660-0.390902.752602.18530K562AGGF1
TIPINENSG00000075131.5409.14360559.42770-0.451303.257302.16920K562AKAP8
TIPINENSG00000075131.5303.29830529.78610-0.804707.748206.60540K562AKAP8L
TIPINENSG00000075131.5384.62890555.84600-0.531205.003503.73500K562ATP5C1
TIPINENSG00000075131.5314.05480529.38060-0.753308.281305.93390K562BCCIP
TIPINENSG00000075131.5380.45370511.63610-0.427403.515602.42750K562BCLAF1
TIPINENSG00000075131.5282.29240462.55170-0.712404.438703.32460K562BOP1
TIPINENSG00000075131.5393.73350600.51230-0.609004.289902.46270K562BUD13
TIPINENSG00000075131.5475.07140713.83380-0.587402.790901.72300K562CNOT7
TIPINENSG00000075131.5139.15060254.99590-0.873805.809304.23920K562DDX3X
TIPINENSG00000075131.51139.15830745.121100.6123010.443009.27000K562DDX47
TIPINENSG00000075131.5393.23680570.17790-0.536004.579003.41210K562DKC1
TIPINENSG00000075131.5309.54530184.137600.749302.741301.74360K562EIF3A
TIPINENSG00000075131.5660.88650448.927100.557805.137804.06730K562EIF3G
TIPINENSG00000075131.5438.44060619.71980-0.499203.637402.65470K562FIP1L1
TIPINENSG00000075131.5250.15380500.39290-1.000207.476606.03630K562FMR1
TIPINENSG00000075131.5228.09430424.10290-0.894805.854904.47280K562FTO
TIPINENSG00000075131.5620.78830277.047901.1639018.8008017.33390K562FXR1
TIPINENSG00000075131.5449.86430332.507100.436001.994501.40640K562G3BP2
TIPINENSG00000075131.5229.94550469.62460-1.030207.534206.22120K562GPKOW
TIPINENSG00000075131.5335.43910572.86270-0.772102.995501.71190K562HNRNPA2B1
TIPINENSG00000075131.5219.37370401.12650-0.870704.188103.46900K562HNRNPC
TIPINENSG00000075131.5828.85240509.713200.701306.068204.61690K562HNRNPM
TIPINENSG00000075131.5147.30470385.62480-1.3884012.315009.65270K562IGF2BP2
TIPINENSG00000075131.5398.66740562.28580-0.496103.654202.68870K562KIF1C
TIPINENSG00000075131.5197.76490400.93800-1.019606.778405.24910K562KRR1
TIPINENSG00000075131.5238.51140357.42490-0.583603.001101.39440K562LSM11
TIPINENSG00000075131.5574.20960405.379000.502204.018302.99930K562MAGOH
TIPINENSG00000075131.5400.36730538.20510-0.426802.646601.60210K562MAK16
TIPINENSG00000075131.5547.31980404.572200.435903.131102.14670K562MATR3
TIPINENSG00000075131.5493.31320629.89510-0.352602.279301.46720K562MBNL1
TIPINENSG00000075131.5268.33180458.39590-0.772604.850603.67120K562METAP2
TIPINENSG00000075131.5290.25900441.50640-0.605103.134202.18540K562NAA15
TIPINENSG00000075131.5393.48040568.27790-0.530305.760204.73780K562NSUN2
TIPINENSG00000075131.5267.39280501.36760-0.906903.029901.98390K562PABPN1
TIPINENSG00000075131.5547.43100397.592900.461302.655101.92050K562PRPF8
TIPINENSG00000075131.5251.99050359.62120-0.513102.193601.39620K562PSIP1
TIPINENSG00000075131.5689.44010393.843400.8077010.218808.99880K562PTBP1
TIPINENSG00000075131.5315.95670525.50530-0.734005.997005.23530K562PUS1
TIPINENSG00000075131.5309.23630511.94050-0.727307.286006.35460K562RBM15
TIPINENSG00000075131.5614.76010404.962500.602103.997003.01240K562RPS19
TIPINENSG00000075131.5179.67810458.67170-1.352005.819803.86820K562SF1
TIPINENSG00000075131.5396.37780560.69350-0.500304.572503.54770K562SF3A3
TIPINENSG00000075131.5205.10840446.54230-1.122408.549406.76720K562SF3B1
TIPINENSG00000075131.5188.47950346.11210-0.876804.815203.67470K562SF3B4
TIPINENSG00000075131.5315.21900559.40300-0.827503.102101.68990K562SFPQ
TIPINENSG00000075131.5320.04490526.51020-0.718202.535801.38090K562SNRNP200
TIPINENSG00000075131.5493.82560386.086400.355002.014301.39990K562SRSF1
TIPINENSG00000075131.5596.03410993.05420-0.736507.933205.59380K562SUCLG1
TIPINENSG00000075131.5597.95920354.593300.753808.298006.86850K562SYNCRIP
TIPINENSG00000075131.5202.41960345.91340-0.773103.251902.23100K562TIAL1
TIPINENSG00000075131.5190.05260367.32350-0.950704.961203.60670K562TRIM56
TIPINENSG00000075131.5434.36680602.55440-0.472204.647503.74080K562UPF1
TIPINENSG00000075131.5347.83770532.70360-0.614902.587001.35200K562UTP18
TIPINENSG00000075131.5322.61170515.59120-0.676404.618203.47190K562WDR3
TIPINENSG00000075131.5620.71700981.68880-0.661303.023302.11630K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIPIN is not available on ENCORE database.





5 RBPs can affect the splicing of TIPIN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETIPINENSG00000075131.5chr15-666413976664146166633487666336946664165266641775-0.091000.000000.00002excludedK562AQR
SETIPINENSG00000075131.5chr15-6664386266643938666416526664177566644466666445450.103000.000140.00845includedK562FXR1
SETIPINENSG00000075131.5chr15-666438626664393866641652666417756664515266645293-0.201000.000030.00092excludedK562PUS1
A3SSTIPINENSG00000075131.5chr15-6664165266641869666416526664177566643862666439380.085000.000000.00000longerK562AQR
MXETIPINENSG00000075131.5chr15-6663348766633694666413976664146166629318666295196664165266641775-0.095000.000420.039582includedK562HNRNPL
MXETIPINENSG00000075131.5chr15-6664165266641775666444666664454566633487666336946664515266645293-0.171000.000000.000162includedK562PUS1
MXETIPINENSG00000075131.5chr15-66643862666439386664446666644574666416526664177566645152666452930.081000.003550.027011includedK562AQR
MXETIPINENSG00000075131.5chr15-66641397666414616664165266641822666334876663369466645152666452930.077000.000000.000011includedK562AQR
MXETIPINENSG00000075131.5chr15-66641397666414616664165266641869666334876663369466643862666439380.084000.000000.000001includedK562AQR
MXETIPINENSG00000075131.5chr15-66641397666414616664165266641822666334876663369466643862666439380.073000.000000.000011includedK562AQR
MXETIPINENSG00000075131.5chr15-66641397666414616664165266641797666334876663369466643862666439380.077000.000000.000011includedK562AQR
MXETIPINENSG00000075131.5chr15-6664165266641797666438626664393866633487666336946664446666644545-0.157000.000000.000002includedK562AQR
MXETIPINENSG00000075131.5chr15-6664165266641822666444666664454566633487666336946664515266645293-0.070000.000000.000042includedK562AQR
MXETIPINENSG00000075131.5chr15-6664165266641775666444666664454566633487666336946664515266645293-0.087000.000000.000042includedK562AQR
MXETIPINENSG00000075131.5chr15-6664165266641775666438626664393866633487666336946664446666644545-0.151000.000020.000332includedK562AQR
MXETIPINENSG00000075131.5chr15-6663348766633694666413976664146166629318666295196664165266641775-0.070000.001290.036482includedK562PPIL4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TIPIN is not avaliable on ENCORE database.