TCEB1

General Information

Gene Name       : TCEB1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TCEB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TCEB1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TCEB1 RNA is bound by 19 proteins.  







eCLIP assay for TCEB1 is not avaliable on ENCORE database.





19 proteins are bound to TCEB1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr87486822474868289-3'-UTR,CDS,intron-Distal4.857096.59793K562UCHL5
chr87485873974858826-3'-UTR,intron-Distal,intron-Proximal3.908243.31904K562IGF2BP1
chr87486823174868291-3'-UTR,CDS,intron-Distal,intron-Proximal3.033956.51488K562DDX3X
chr87486826074868348-3'-UTR,CDS,intron-Distal,intron-Proximal4.230166.11702K562SF3B4
chr87485877574858830-3'-UTR,intron-Distal3.223773.27682HepG2LARP4
chr87488431174884376-5'-UTR,intron-Distal,intron-Proximal3.374045.46884K562GEMIN5
chr87488431074884407-5'-UTR,intron-Distal,intron-Proximal4.2664410.17595K562FTO
chr87488431074884388-5'-UTR,intron-Distal,intron-Proximal4.3574855.16717K562DDX3X
chr87487680674876861-5'-UTR,intron-Distal,intron-Proximal3.397758.78299K562DDX3X
chr87487201674872053-5'-UTR,intron-Distal4.0298719.68984K562DDX3X
chr87488404674884139-5'-UTR,intron-Distal4.567424.06667K562GTF2F1
chr87488420774884300-5'-UTR,intron-Distal,intron-Proximal3.224573.25653K562CSTF2T
chr87488431274884374-5'-UTR,intron-Distal,intron-Proximal3.866603.30705HepG2GTF2F1
chr87488430974884374-5'-UTR,intron-Distal,intron-Proximal4.4259210.09550K562DROSHA
chr87488426774884326-5'-UTR,intron-Distal4.641265.27173HepG2PRPF8
chr87488430974884390-5'-UTR,intron-Distal,intron-Proximal3.699906.12231HepG2GRSF1
chr87488430974884384-5'-UTR,intron-Distal,intron-Proximal4.251438.94209HepG2DDX3X
chr87488425574884394-5'-UTR,intron-Distal,intron-Proximal5.084118.82769HepG2PRPF4
chr87488430274884387-5'-UTR,intron-Distal,intron-Proximal3.9889010.02412K562NCBP2
chr87487672174876806-5'-UTR,intron-Distal,intron-Proximal4.029497.63469K562DDX3X
chr87485894974858975-CDS,intron-Distal4.439766.51752K562PABPC4
chr87486814574868200-CDS,intron-Distal,intron-Proximal4.249868.29571K562PUM2
chr87487807074878181-intron-Distal3.820743.33944K562MATR3
chr87486801874868108-intron-Distal,intron-Proximal3.499055.35459K562KHSRP
chr87487853574878635-intron-Distal4.297873.74583HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TCEB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TCEB1 is not available on ENCORE database.

  • 64 RBPs can affect the levels of TCEB1.  








The Knockdown/knockout RNA-Seq assay for TCEB1 is not available on ENCORE database.





64 RBPs can affect the gene expression of TCEB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TCEB1ENSG00000154582.12795.37660658.074800.273302.340801.77390HepG2ACO1
TCEB1ENSG00000154582.121560.472101028.088900.601905.117004.42120HepG2AKAP1
TCEB1ENSG00000154582.12844.54470661.218200.352903.414302.57400HepG2AKAP8L
TCEB1ENSG00000154582.12850.57900543.010500.647406.081305.23320HepG2BOP1
TCEB1ENSG00000154582.12799.12200657.993800.280202.536001.89400HepG2CKAP4
TCEB1ENSG00000154582.12899.55810574.613800.646503.669502.78300HepG2CNOT7
TCEB1ENSG00000154582.12702.49070898.91240-0.355701.853701.32640HepG2EIF4A3
TCEB1ENSG00000154582.12996.107101286.11610-0.368604.481703.75040HepG2ETF1
TCEB1ENSG00000154582.12394.56150563.95020-0.515303.812802.89830HepG2FUBP3
TCEB1ENSG00000154582.12739.46970921.78490-0.317903.065702.31350HepG2HNRNPF
TCEB1ENSG00000154582.12690.72570539.356800.356802.050201.49980HepG2HNRNPLL
TCEB1ENSG00000154582.12698.04230907.69200-0.378903.388302.59360HepG2IGF2BP1
TCEB1ENSG00000154582.12414.43870571.76530-0.464303.319001.98300HepG2NAA15
TCEB1ENSG00000154582.12866.486201125.55720-0.377404.093003.16550HepG2NOL12
TCEB1ENSG00000154582.121563.257201074.955000.540208.639107.84200HepG2RBM22
TCEB1ENSG00000154582.12810.16640955.21410-0.237601.809401.35180HepG2NELFE
TCEB1ENSG00000154582.12587.98180889.64960-0.597508.163107.18800HepG2RECQL
TCEB1ENSG00000154582.121150.18440639.584600.846602.233801.62710HepG2SF3A3
TCEB1ENSG00000154582.12689.176601030.04120-0.5798010.364109.14540HepG2SLBP
TCEB1ENSG00000154582.121652.119001214.122000.444308.107707.37430HepG2SRFBP1
TCEB1ENSG00000154582.121612.33000932.735000.7895019.6828018.66300HepG2SRSF1
TCEB1ENSG00000154582.12756.09220905.63350-0.260402.235301.60260HepG2SRSF7
TCEB1ENSG00000154582.12446.47560678.75960-0.604303.080101.80710HepG2SUB1
TCEB1ENSG00000154582.12515.11710838.37530-0.702709.568908.62810HepG2TAF15
TCEB1ENSG00000154582.12730.61660442.250700.724206.585905.40320HepG2UCHL5
TCEB1ENSG00000154582.12782.53800547.622800.514905.991005.16610HepG2UTP3
TCEB1ENSG00000154582.12900.29900623.826700.529208.203907.39160HepG2ZNF622
TCEB1ENSG00000154582.122200.347101314.075500.7436020.5290019.09830K562AGGF1
TCEB1ENSG00000154582.121819.248201443.916800.333302.805201.81360K562AKAP8
TCEB1ENSG00000154582.122356.838501367.342000.7854013.4282011.82600K562AKAP8L
TCEB1ENSG00000154582.122858.233402188.451600.385103.995403.31540K562AQR
TCEB1ENSG00000154582.121714.023001434.646000.256602.384701.54150K562ATP5C1
TCEB1ENSG00000154582.121021.458501343.96970-0.395905.384504.02700K562BCLAF1
TCEB1ENSG00000154582.12519.82620709.55250-0.448902.510401.51560K562CCAR1
TCEB1ENSG00000154582.12673.91390921.00190-0.450604.033603.08650K562CPSF6
TCEB1ENSG00000154582.12789.298401019.60120-0.369403.353702.17300K562CSTF2
TCEB1ENSG00000154582.121013.473301236.36130-0.286802.780001.56540K562DDX21
TCEB1ENSG00000154582.12558.33230794.27290-0.508503.216901.77200K562DHX30
TCEB1ENSG00000154582.121874.118801471.440600.348904.376703.23880K562DKC1
TCEB1ENSG00000154582.12552.57820763.03750-0.465603.241901.78270K562DNAJC21
TCEB1ENSG00000154582.121367.189001643.19110-0.265302.701301.98890K562EIF2S2
TCEB1ENSG00000154582.12464.29280721.76600-0.636503.352402.23710K562EIF3A
TCEB1ENSG00000154582.12690.06320991.96400-0.523604.891303.79640K562EIF4A3
TCEB1ENSG00000154582.122180.260402568.86690-0.236602.427901.54450K562EIF4G2
TCEB1ENSG00000154582.121837.746101468.694600.323302.612901.78940K562FIP1L1
TCEB1ENSG00000154582.121464.733401031.608000.505607.479206.54910K562FXR1
TCEB1ENSG00000154582.12889.074801113.66300-0.324902.414501.85180K562HNRNPC
TCEB1ENSG00000154582.122131.802101208.046000.8193010.621208.51510K562HNRNPM
TCEB1ENSG00000154582.121321.364501627.41680-0.300603.087002.14630K562HNRNPU
TCEB1ENSG00000154582.12470.60610716.53080-0.606504.661002.73600K562KHDRBS1
TCEB1ENSG00000154582.121908.355001451.137800.395004.050103.02670K562KIF1C
TCEB1ENSG00000154582.12660.68780858.31980-0.377502.775601.89750K562METAP2
TCEB1ENSG00000154582.121079.098001361.50060-0.335404.950403.99190K562NSUN2
TCEB1ENSG00000154582.12793.934701042.83120-0.393403.473002.56990K562POLR2G
TCEB1ENSG00000154582.122103.442001667.293100.335102.735201.91890K562PPIG
TCEB1ENSG00000154582.121826.274601067.085200.7751011.279709.75810K562PRPF8
TCEB1ENSG00000154582.121642.587901331.754900.302502.734102.07340K562PTBP1
TCEB1ENSG00000154582.122362.756701356.122500.8009012.2755011.17980K562PUS1
TCEB1ENSG00000154582.121961.774001321.258800.570109.750208.66280K562RBM15
TCEB1ENSG00000154582.12696.61080960.58110-0.463603.698902.01630K562SDAD1
TCEB1ENSG00000154582.12472.82560781.62840-0.725205.609003.79270K562SLBP
TCEB1ENSG00000154582.12874.380301187.05210-0.441104.316902.39440K562SRSF9
TCEB1ENSG00000154582.12656.652101033.53910-0.654403.561702.39420K562SUPV3L1
TCEB1ENSG00000154582.12694.93000988.37080-0.508203.860501.73780K562TRNAU1AP
TCEB1ENSG00000154582.121004.140801443.63100-0.523709.199907.98390K562UPF1
TCEB1ENSG00000154582.12929.451901235.26460-0.410403.966902.91280K562WDR3
TCEB1ENSG00000154582.121945.103302465.44810-0.342003.258802.31330K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TCEB1 is not available on ENCORE database.





22 RBPs can affect the splicing of TCEB1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.197000.000000.00543includedK562SMNDC1
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.235000.000010.00208excludedHepG2PRPF8
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.145000.000720.02420includedK562AKAP8L
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.166000.000090.00173excludedHepG2U2AF2
SETCEB1ENSG00000154582.12chr8-748719997487219774868145748682897488447974884522-0.053000.000000.00000excludedK562AQR
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.161000.000050.00123includedK562PUS1
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.145000.000070.02089includedK562LARP4
SETCEB1ENSG00000154582.12chr8-748719997487205374868145748682897488431174884482-0.057000.000010.00171excludedHepG2DDX6
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.135000.000630.04737includedK562HNRNPUL1
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.163000.000810.07152excludedHepG2SUPV3L1
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.182000.000090.04354excludedHepG2BCCIP
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.132000.000820.02946includedK562UTP18
SETCEB1ENSG00000154582.12chr8-748719997487205374868145748682897488431174884482-0.055000.000000.00002excludedK562U2AF2
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.187000.000030.00251excludedK562HNRNPU
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.150000.000230.00864includedK562RBM15
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.144000.000190.00759includedK562AGGF1
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.214000.000000.00051excludedHepG2DDX55
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.222000.000000.00112excludedHepG2XRN2
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.162000.000550.02856excludedK562HNRNPK
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.143000.002600.08768excludedHepG2HNRNPU
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.708000.000000.00000includedHepG2HNRNPC
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.149000.000030.01312excludedHepG2FUS
SETCEB1ENSG00000154582.12chr8-748767217487686074871999748720537488431174884487-0.250000.000200.05006excludedK562SERBP1
SETCEB1ENSG00000154582.12chr8-7487672174876860748719997487205374884311748844870.609000.000000.00000includedK562HNRNPC
A3SSTCEB1ENSG00000154582.12chr8-7486814574868341748681457486828974884311748844050.558000.000000.00000longerK562AQR
MXETCEB1ENSG00000154582.12chr8-7486814574868289748719997487205374858934748590557487672174876860-0.128000.005670.059722includedK562DROSHA
MXETCEB1ENSG00000154582.12chr8-74868145748682897487199974872053748589347485905574876721748768600.292000.000000.000001includedHepG2HNRNPC
MXETCEB1ENSG00000154582.12chr8-74868145748682897487199974872053748587687485905574876721748768600.331000.000000.000001includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TCEB1 is not avaliable on ENCORE database.