STAT1

General Information

Gene Name       : STAT1
Gene ID             : ENSG00000115415.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: STAT1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878STAT1ENSG00000115415.18258.77229.39244.08ENCSR000AEF
HepG2STAT1ENSG00000115415.1833.0951.0442.06ENCSR985KAT
K562STAT1ENSG00000115415.1819.0220.8819.95ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for STAT1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • STAT1 RNA is bound by 13 proteins.  







eCLIP assay for STAT1 is not avaliable on ENCORE database.





13 proteins are bound to STAT1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2191878250191878329-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.351923.06445HepG2EIF3D
chr2191834695191834766-3'-UTR,intron-Distal4.224107.45604K562PUM2
chr2191847093191847161-3'-UTR,CDS,intron-Distal,intron-Proximal5.989807.36776HepG2PRPF8
chr2191839516191839572-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9883013.83580HepG2PRPF8
chr2191834544191834664-3'-UTR,intron-Distal5.2045910.66212K562IGF2BP1
chr2191834598191834618-3'-UTR,intron-Distal3.721244.60014HepG2IGF2BP1
chr2191834618191834647-3'-UTR,intron-Distal3.721244.60014HepG2IGF2BP1
chr2191839595191839675-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.9346615.25522HepG2U2AF2
chr2191878350191878457-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.309095.58362HepG2U2AF2
chr2191856012191856044-3'-UTR,CDS,intron-Distal3.567343.68471HepG2BCLAF1
chr2191850351191850382-3'-UTR,CDS,intron-Distal3.406383.68471HepG2BCLAF1
chr2191848389191848452-3'-UTR,CDS,intron-Distal,intron-Proximal4.611725.64683K562YBX3
chr2191859857191859946-5'-UTR,CDS,intron-Distal,intron-Proximal4.206113.68241HepG2G3BP1
chr2191862582191862670-5'-UTR,CDS,intron-Distal3.320694.44431HepG2G3BP1
chr2191878788191878893-5'-UTR,intron-Distal4.5670012.22508K562DDX3X
chr2191878736191878773-5'-UTR,intron-Distal,intron-Proximal4.908424.11950K562DDX3X
chr2191878743191878793-5'-UTR,intron-Distal,intron-Proximal4.479746.15796HepG2DDX3X
chr2191878793191878892-5'-UTR,intron-Distal6.3561916.92762HepG2DDX3X
chr2191878675191878732-5'-UTR,intron-Distal,intron-Proximal4.658404.40230HepG2RBM22
chr2191872306191872359-CDS,intron-Distal3.980334.51739HepG2BCLAF1
chr2191865812191865890-CDS,intron-Distal,intron-Proximal3.982175.94293HepG2BCLAF1
chr2191864356191864424-CDS,intron-Distal4.241305.79432HepG2BCLAF1
chr2191874616191874677-CDS,intron-Distal3.902243.56019HepG2GRWD1
chr2191862714191862734-CDS,intron-Distal,intron-Proximal4.457783.45943HepG2BCLAF1
chr2191837530191837608-intron-Distal3.408597.63423HepG2HNRNPL
chr2191838139191838196-intron-Distal4.342755.04227HepG2HNRNPL
chr2191836890191837002-intron-Distal3.900188.15069HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for STAT1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for STAT1 is not available on ENCORE database.

  • 93 RBPs can affect the levels of STAT1.  








The Knockdown/knockout RNA-Seq assay for STAT1 is not available on ENCORE database.





93 RBPs can affect the gene expression of STAT1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
STAT1ENSG00000115415.141838.514001373.013400.421104.052702.77990HepG2AATF
STAT1ENSG00000115415.142280.638901681.541400.439603.802902.70780HepG2ABCF1
STAT1ENSG00000115415.142717.986801635.145500.7330019.5583018.26150HepG2ACO1
STAT1ENSG00000115415.144947.906901907.682401.3749027.8005026.32530HepG2AKAP1
STAT1ENSG00000115415.141618.212001165.367000.473503.699202.50420HepG2AKAP8
STAT1ENSG00000115415.142303.067001642.929600.487206.719705.57940HepG2AKAP8L
STAT1ENSG00000115415.142847.699901578.485000.8512012.9486011.35630HepG2ASCC1
STAT1ENSG00000115415.141259.448401887.19190-0.583405.137703.85750HepG2BCCIP
STAT1ENSG00000115415.141431.379401766.16510-0.303202.918702.12880HepG2CALR
STAT1ENSG00000115415.144481.024802600.439300.785004.388003.14510HepG2CCAR1
STAT1ENSG00000115415.141974.066501499.657100.396403.326102.48320HepG2CIRBP
STAT1ENSG00000115415.142338.369501140.273401.036009.956808.53940HepG2CNOT7
STAT1ENSG00000115415.141266.411501768.63720-0.481904.714503.83760HepG2CPSF6
STAT1ENSG00000115415.14973.430501385.01900-0.508805.358603.85750HepG2CPSF7
STAT1ENSG00000115415.143684.175402213.605800.7348017.3821016.04740HepG2CELF1
STAT1ENSG00000115415.141889.904102380.05600-0.332706.184505.13750HepG2DAZAP1
STAT1ENSG00000115415.144312.366101855.511401.216609.357508.03170HepG2DDX55
STAT1ENSG00000115415.141247.547801569.66590-0.331401.873801.35540HepG2DDX6
STAT1ENSG00000115415.141171.658701564.42280-0.417106.196305.26000HepG2DKC1
STAT1ENSG00000115415.14889.485201590.65360-0.8386019.4334017.75190HepG2DNAJC21
STAT1ENSG00000115415.141078.288701576.63920-0.5481012.5848011.30210HepG2DNAJC2
STAT1ENSG00000115415.142085.148601454.001100.520005.461204.20270HepG2EEF2
STAT1ENSG00000115415.141580.525501212.253000.382603.106201.93390HepG2EFTUD2
STAT1ENSG00000115415.141162.573901509.14820-0.376402.629602.05130HepG2EIF2S1
STAT1ENSG00000115415.141603.899901275.765800.330103.121601.87550HepG2EIF2S2
STAT1ENSG00000115415.143123.290701623.737800.9436010.684909.37530HepG2EIF4B
STAT1ENSG00000115415.142366.528901682.540700.492004.747603.85740HepG2FXR1
STAT1ENSG00000115415.142058.610601560.949700.399102.178601.58550HepG2G3BP1
STAT1ENSG00000115415.142062.866501580.588900.384103.180402.08690HepG2GNB2L1
STAT1ENSG00000115415.14680.540602004.98620-1.5588031.9495030.05790HepG2GPKOW
STAT1ENSG00000115415.142930.169202187.394500.421708.122606.67530HepG2HNRNPA2B1
STAT1ENSG00000115415.141859.473302318.09320-0.318004.288903.41690HepG2HNRNPF
STAT1ENSG00000115415.142152.498001580.261000.445704.442303.57370HepG2HNRNPK
STAT1ENSG00000115415.141595.456202168.01440-0.442409.808008.61530HepG2HNRNPL
STAT1ENSG00000115415.141353.532801913.38640-0.499404.778503.97410HepG2HNRNPLL
STAT1ENSG00000115415.141332.301201774.45890-0.413506.822405.90840HepG2HNRNPU
STAT1ENSG00000115415.141872.938602282.67550-0.285402.598001.89640HepG2IGF2BP1
STAT1ENSG00000115415.142573.868101586.723400.697806.909805.88930HepG2IGF2BP2
STAT1ENSG00000115415.141306.976601812.54920-0.4718011.111309.74750HepG2ILF2
STAT1ENSG00000115415.144025.754902744.474600.552604.727103.63370HepG2LARP4
STAT1ENSG00000115415.142295.176901683.126800.447403.891903.11510HepG2MAGOH
STAT1ENSG00000115415.143228.209401692.592400.9314011.107709.90440HepG2MATR3
STAT1ENSG00000115415.142235.127501374.459400.7014012.1600010.58600HepG2MSI2
STAT1ENSG00000115415.141425.388701951.19090-0.453002.421901.52050HepG2MTPAP
STAT1ENSG00000115415.14911.290101154.08880-0.340802.460801.31810HepG2NAA15
STAT1ENSG00000115415.142180.288501732.499200.331602.305901.72530HepG2NCBP2
STAT1ENSG00000115415.141181.739601696.51170-0.521705.317604.29590HepG2NSUN2
STAT1ENSG00000115415.141856.442601508.930400.298903.797603.11000HepG2PCBP1
STAT1ENSG00000115415.141057.780201582.67370-0.5813010.041008.68610HepG2PPIL4
STAT1ENSG00000115415.142739.381601901.776200.526403.303401.97890HepG2PRPF6
STAT1ENSG00000115415.142800.071901535.371300.866809.485608.59270HepG2PTBP1
STAT1ENSG00000115415.141702.376402252.91980-0.404204.307603.58350HepG2PUF60
STAT1ENSG00000115415.143573.228902391.610600.5791022.5687021.20980HepG2PUM1
STAT1ENSG00000115415.142082.619101665.519700.322305.206804.41020HepG2PUS1
STAT1ENSG00000115415.142097.257101662.891600.334703.773803.06080HepG2QKI
STAT1ENSG00000115415.142938.393101708.739000.7820024.4515023.16280HepG2NELFE
STAT1ENSG00000115415.142070.380101591.425200.379505.959605.10190HepG2RECQL
STAT1ENSG00000115415.142273.763301722.111700.400803.574802.66750HepG2RPS2
STAT1ENSG00000115415.141466.277401152.821100.346902.718101.78820HepG2SERBP1
STAT1ENSG00000115415.142183.784301598.558900.450008.105507.17640HepG2SF3B4
STAT1ENSG00000115415.141683.606902160.27430-0.359706.625905.61370HepG2SLBP
STAT1ENSG00000115415.143715.432802107.310300.818004.770603.73220HepG2SNRNP70
STAT1ENSG00000115415.142414.101302743.05200-0.184302.268701.80050HepG2SRFBP1
STAT1ENSG00000115415.144589.821701668.533401.45980101.4665099.58920HepG2SRSF1
STAT1ENSG00000115415.142620.100402037.715400.362602.277201.37910HepG2SRSF3
STAT1ENSG00000115415.141929.672902277.39660-0.239002.633901.95410HepG2SRSF7
STAT1ENSG00000115415.141792.844201357.427000.401306.760805.96670HepG2SRSF9
STAT1ENSG00000115415.143116.907102381.575300.388107.890407.11020HepG2SSB
STAT1ENSG00000115415.142920.907202529.802200.207302.025301.47700HepG2SUCLG1
STAT1ENSG00000115415.142346.625401847.118700.345202.251501.63280HepG2SUPV3L1
STAT1ENSG00000115415.142081.814101499.698400.473107.618406.76370HepG2TAF15
STAT1ENSG00000115415.141473.110001724.17910-0.227001.874901.44600HepG2TIAL1
STAT1ENSG00000115415.141274.833701739.63420-0.448507.906607.03100HepG2TRIM56
STAT1ENSG00000115415.14986.173901452.64810-0.558805.592604.71570HepG2U2AF1
STAT1ENSG00000115415.141038.345802097.10390-1.014103.272002.19800HepG2U2AF2
STAT1ENSG00000115415.14859.472101091.14010-0.344302.223601.54310HepG2UCHL5
STAT1ENSG00000115415.142128.950001644.968700.372006.656205.64840HepG2UPF1
STAT1ENSG00000115415.142239.978301588.149400.4960010.732409.67630HepG2UTP3
STAT1ENSG00000115415.141435.222301818.28630-0.341302.423101.74120HepG2XRN2
STAT1ENSG00000115415.141660.090801457.003200.188201.929701.35360HepG2ZC3H8
STAT1ENSG00000115415.142733.919202180.657300.326102.718101.50870K562ABCF1
STAT1ENSG00000115415.141899.433801568.857600.275802.095301.52420K562AKAP8L
STAT1ENSG00000115415.141728.805502531.20320-0.550007.288106.40850K562AQR
STAT1ENSG00000115415.141181.540601580.55000-0.419805.791603.76270K562BCCIP
STAT1ENSG00000115415.141528.574001100.259300.474204.259103.16800K562BOP1
STAT1ENSG00000115415.14514.76090703.07410-0.449803.099801.97070K562CCAR1
STAT1ENSG00000115415.144500.530203889.678200.210302.226201.35210K562CELF1
STAT1ENSG00000115415.143072.457202303.931000.415208.405107.35020K562DDX47
STAT1ENSG00000115415.142037.975201688.262100.271502.973302.05960K562DKC1
STAT1ENSG00000115415.14757.231801116.95270-0.560805.872704.72000K562GPKOW
STAT1ENSG00000115415.141945.442602519.28880-0.372904.039703.12860K562GRSF1
STAT1ENSG00000115415.141610.077502082.15350-0.370903.841902.56890K562HNRNPL
STAT1ENSG00000115415.14889.891401381.51710-0.634606.675404.22060K562LIN28B
STAT1ENSG00000115415.141447.471601681.95250-0.216602.278101.54230K562MTPAP
STAT1ENSG00000115415.142144.503701868.772100.198502.777102.02970K562NSUN2
STAT1ENSG00000115415.14971.283901341.18330-0.465503.700201.96110K562NUSAP1
STAT1ENSG00000115415.141035.382601329.93920-0.361203.100101.57930K562PHF6
STAT1ENSG00000115415.14736.375901221.38690-0.730009.796507.86410K562PSIP1
STAT1ENSG00000115415.142001.553101570.035600.350203.672802.91910K562PTBP1
STAT1ENSG00000115415.142423.673703451.92870-0.510206.371605.13430K562PUF60
STAT1ENSG00000115415.142932.745903597.52180-0.294803.705802.59230K562PUM2
STAT1ENSG00000115415.142954.308601555.943600.9249017.0957015.78760K562PUS1
STAT1ENSG00000115415.141209.221501505.81950-0.316502.411301.63050K562RBM22
STAT1ENSG00000115415.141767.082901386.469000.349902.271801.53490K562RPS19
STAT1ENSG00000115415.141145.577101392.58610-0.281702.487901.67820K562SF3B4
STAT1ENSG00000115415.14703.418801056.31850-0.586605.902304.24480K562SRFBP1
STAT1ENSG00000115415.141271.638501557.80910-0.292801.982701.37620K562TARDBP
STAT1ENSG00000115415.141132.385501502.64300-0.408104.274403.22380K562TIA1
STAT1ENSG00000115415.14810.599301298.08790-0.679306.637704.79330K562U2AF1
STAT1ENSG00000115415.14985.435201340.79940-0.444305.163504.07120K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for STAT1 is not available on ENCORE database.





4 RBPs can affect the splicing of STAT1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESTAT1ENSG00000115415.14chr2-1918750921918751751918746011918747301918782501918784040.054000.000730.00935includedK562AQR
SESTAT1ENSG00000115415.14chr2-191862942191863034191862581191862733191864351191864423-0.060000.000150.00249excludedK562AQR
SESTAT1ENSG00000115415.14chr2-1918400351918401601918395551918396581918405371918406130.071000.000420.06580includedHepG2TIA1
SESTAT1ENSG00000115415.14chr2-1918750921918751751918746011918747301918782501918784040.097000.000520.03140includedK562EFTUD2
SESTAT1ENSG00000115415.14chr2-1918400351918401141918395551918396581918405371918406130.118000.000960.06332includedHepG2IGF2BP3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for STAT1 is not avaliable on ENCORE database.