SLC25A19

General Information

Gene Name       : SLC25A19
Gene ID             : ENSG00000125454.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A19)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A19ENSG00000125454.1115.2030.9623.08ENCSR000AEF
HepG2SLC25A19ENSG00000125454.1134.8625.6930.27ENCSR985KAT
K562SLC25A19ENSG00000125454.1144.0138.4041.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A19 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A19 RNA is bound by 4 proteins.  







eCLIP assay for SLC25A19 is not avaliable on ENCORE database.





4 proteins are bound to SLC25A19 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177328524873285352-5'-UTR,intron-Distal,intron-Proximal4.064159.56233HepG2EFTUD2
chr177328541273285480-5'-UTR,intron-Distal,intron-Proximal4.244424.10386HepG2NCBP2
chr177328231073282413-5'-UTR,CDS,intron-Distal,intron-Proximal3.533407.02084HepG2PRPF8
chr177328464773284705-5'-UTR,intron-Distal,intron-Proximal3.942173.12843K562PRPF8
chr177328538873285449-5'-UTR,intron-Distal,intron-Proximal5.130256.01989HepG2PRPF8
chr177328535273285422-5'-UTR,intron-Distal,intron-Proximal4.862086.40957HepG2EFTUD2
chr177328267273282729-CDS,intron-Distal,intron-Proximal3.708194.50321HepG2PRPF8
chr177327343873273543-CDS,intron-Distal3.556564.11795K562YBX3
chr177328264973282731-CDS,intron-Distal,intron-Proximal5.378398.45448K562PRPF8
chr177327439673274408-CDS,intron-Distal3.927103.46958K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A19 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A19 is not available on ENCORE database.

  • 82 RBPs can affect the levels of SLC25A19.  








The Knockdown/knockout RNA-Seq assay for SLC25A19 is not available on ENCORE database.





82 RBPs can affect the gene expression of SLC25A19 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A19ENSG00000125454.7158.61910239.19610-0.592602.755101.68520HepG2AATF
SLC25A19ENSG00000125454.7344.40820463.34740-0.428003.141802.41670HepG2AUH
SLC25A19ENSG00000125454.7135.53720238.63010-0.816104.776003.79670HepG2CALR
SLC25A19ENSG00000125454.7123.79550227.66850-0.879004.600703.73390HepG2CPSF6
SLC25A19ENSG00000125454.7150.01030244.84200-0.706803.109001.63860HepG2CSTF2T
SLC25A19ENSG00000125454.7173.26030264.06310-0.607903.122602.40520HepG2DDX21
SLC25A19ENSG00000125454.7186.27370329.41450-0.822504.539003.57420HepG2DDX55
SLC25A19ENSG00000125454.7158.51120258.53710-0.705802.532501.59840HepG2DDX59
SLC25A19ENSG00000125454.7179.39320293.30810-0.709303.381502.70620HepG2DDX6
SLC25A19ENSG00000125454.7193.57200275.02120-0.506702.687902.01920HepG2DKC1
SLC25A19ENSG00000125454.7144.45140206.30300-0.514202.269301.62750HepG2DNAJC21
SLC25A19ENSG00000125454.7118.56960243.05340-1.035505.919804.30980HepG2AGO1
SLC25A19ENSG00000125454.7176.97740281.92170-0.671703.252502.61240HepG2EIF2S1
SLC25A19ENSG00000125454.7367.15980532.00360-0.535004.862904.10580HepG2ETF1
SLC25A19ENSG00000125454.7142.42400251.57430-0.820805.035503.56220HepG2FASTKD2
SLC25A19ENSG00000125454.7113.01900228.07670-1.013003.079902.00730HepG2FTO
SLC25A19ENSG00000125454.7464.58520314.499100.562803.278202.56440HepG2MAGOH
SLC25A19ENSG00000125454.7443.80910316.249200.488802.355701.77070HepG2MATR3
SLC25A19ENSG00000125454.7186.53130302.50290-0.697502.715601.63320HepG2NONO
SLC25A19ENSG00000125454.7134.16580218.38260-0.702802.815302.06010HepG2NSUN2
SLC25A19ENSG00000125454.7151.34740246.86040-0.705803.041201.95280HepG2PCBP2
SLC25A19ENSG00000125454.7110.59110254.10150-1.200207.635906.37360HepG2PRPF8
SLC25A19ENSG00000125454.7234.46470384.30310-0.712904.958104.18790HepG2PUF60
SLC25A19ENSG00000125454.7209.64270342.39720-0.707704.962204.16170HepG2QKI
SLC25A19ENSG00000125454.7141.26900238.17440-0.753602.617701.93130HepG2RAVER1
SLC25A19ENSG00000125454.7205.62610329.52630-0.680404.421303.36660HepG2RBM15
SLC25A19ENSG00000125454.7298.11170444.65260-0.576804.668904.04100HepG2RBM22
SLC25A19ENSG00000125454.7210.36650310.74550-0.562803.129802.41760HepG2RBM25
SLC25A19ENSG00000125454.7119.05420181.94340-0.611902.382801.80790HepG2RPS19
SLC25A19ENSG00000125454.7120.61230251.35750-1.059405.842604.74320HepG2RRP9
SLC25A19ENSG00000125454.7238.49490329.15130-0.464802.588302.01230HepG2SF3B4
SLC25A19ENSG00000125454.7144.31010271.21390-0.910304.172003.20440HepG2SNRNP70
SLC25A19ENSG00000125454.7242.17090502.21190-1.0523014.6502013.73850HepG2SRFBP1
SLC25A19ENSG00000125454.7264.51470343.56100-0.377201.985601.56660HepG2SRSF1
SLC25A19ENSG00000125454.7198.63040279.50370-0.492802.844502.28680HepG2SRSF9
SLC25A19ENSG00000125454.7150.80200327.92260-1.120707.321406.30530HepG2SUPV3L1
SLC25A19ENSG00000125454.7131.99920240.09980-0.863104.685203.77550HepG2TARDBP
SLC25A19ENSG00000125454.7138.34660219.79230-0.667902.883301.86810HepG2TFIP11
SLC25A19ENSG00000125454.7678.89110318.603401.0913019.3661018.00050HepG2UTP3
SLC25A19ENSG00000125454.7262.71100362.93850-0.466203.338102.75370HepG2ZNF622
SLC25A19ENSG00000125454.7321.39580432.94510-0.429802.497301.57240K562AKAP8
SLC25A19ENSG00000125454.7554.37520939.52170-0.761105.015104.26700K562AQR
SLC25A19ENSG00000125454.7243.65870364.84720-0.582403.197602.25910K562BOP1
SLC25A19ENSG00000125454.7275.28920387.92920-0.494802.963502.15190K562CPSF6
SLC25A19ENSG00000125454.7947.57330771.744200.296002.568601.93780K562DDX47
SLC25A19ENSG00000125454.7375.19410507.71420-0.436402.466301.60620K562EFTUD2
SLC25A19ENSG00000125454.7520.83240840.11250-0.689809.940608.70640K562EIF2S2
SLC25A19ENSG00000125454.7405.74750262.060700.630604.834503.79770K562EIF3G
SLC25A19ENSG00000125454.7491.33240342.339700.521203.497702.57890K562EIF4A3
SLC25A19ENSG00000125454.7939.724101168.58910-0.314502.587801.67600K562EIF4G2
SLC25A19ENSG00000125454.7167.67490280.36020-0.741604.583102.47360K562FASTKD2
SLC25A19ENSG00000125454.7324.75390473.43740-0.543803.252902.01460K562FKBP4
SLC25A19ENSG00000125454.7250.12970394.72440-0.658204.354803.28140K562FMR1
SLC25A19ENSG00000125454.7202.90080334.57140-0.721504.240903.08840K562FTO
SLC25A19ENSG00000125454.7731.79910356.015501.0394010.256909.17700K562FXR1
SLC25A19ENSG00000125454.795.21900203.02560-1.092305.583004.49810K562G3BP2
SLC25A19ENSG00000125454.7207.41000370.37040-0.836506.306505.11040K562GPKOW
SLC25A19ENSG00000125454.7566.65570721.62460-0.348802.512901.48790K562HNRNPA1
SLC25A19ENSG00000125454.7236.51820432.90960-0.872103.648202.18250K562HNRNPA2B1
SLC25A19ENSG00000125454.7355.40570545.24660-0.617404.919404.14600K562HNRNPC
SLC25A19ENSG00000125454.7914.79460697.381200.391403.173602.03310K562HNRNPL
SLC25A19ENSG00000125454.7697.05350468.886100.571904.096802.94970K562HNRNPM
SLC25A19ENSG00000125454.7550.65610799.15700-0.537305.845004.53380K562HNRNPU
SLC25A19ENSG00000125454.7319.59830435.11120-0.445102.750701.92700K562KIF1C
SLC25A19ENSG00000125454.7189.35480316.26710-0.740103.619902.53560K562KRR1
SLC25A19ENSG00000125454.7632.33430373.145200.760908.424206.92120K562MAGOH
SLC25A19ENSG00000125454.7925.377201245.64040-0.428803.193701.97610K562MSI2
SLC25A19ENSG00000125454.7465.74320704.64120-0.597403.178601.84150K562PABPC1
SLC25A19ENSG00000125454.7211.32710378.80840-0.842003.224902.13320K562PABPN1
SLC25A19ENSG00000125454.7390.76040657.79720-0.751406.450005.17920K562PCBP3
SLC25A19ENSG00000125454.7352.86150504.53290-0.515803.916702.95650K562POLR2G
SLC25A19ENSG00000125454.7740.14310362.533701.0296016.0440014.51250K562PTBP1
SLC25A19ENSG00000125454.7879.133401275.05170-0.536404.620903.56990K562PUF60
SLC25A19ENSG00000125454.71090.089501355.98470-0.314902.289901.32670K562PUM1
SLC25A19ENSG00000125454.71043.791601328.83420-0.348303.206202.17370K562PUM2
SLC25A19ENSG00000125454.7463.60530347.628200.415302.456201.66770K562RBM22
SLC25A19ENSG00000125454.7549.20150712.81550-0.376202.446201.67630K562SF3A3
SLC25A19ENSG00000125454.7208.69850352.25900-0.755204.338903.10350K562SF3B1
SLC25A19ENSG00000125454.7533.54000355.403600.586004.702703.78610K562SRSF1
SLC25A19ENSG00000125454.7431.24760574.25680-0.413203.022301.43100K562SRSF9
SLC25A19ENSG00000125454.7169.71070270.31950-0.671604.014102.43190K562SSB
SLC25A19ENSG00000125454.7509.39420747.83950-0.553904.368802.62690K562SSRP1
SLC25A19ENSG00000125454.7222.83110488.17070-1.131404.198001.72640K562SUGP2
SLC25A19ENSG00000125454.7213.61930475.94010-1.155705.570303.33760K562SUPT6H
SLC25A19ENSG00000125454.7271.43070359.69240-0.406201.961501.35890K562TARDBP
SLC25A19ENSG00000125454.7324.80540470.21380-0.533703.120002.12080K562TIAL1
SLC25A19ENSG00000125454.7374.98560499.56870-0.413802.389601.52020K562TRIM56
SLC25A19ENSG00000125454.7293.83250506.29950-0.785006.356404.74160K562UCHL5
SLC25A19ENSG00000125454.7611.89020766.07810-0.324202.275001.61960K562UPF1
SLC25A19ENSG00000125454.7402.15660655.51830-0.704907.412905.93930K562WDR3
SLC25A19ENSG00000125454.7597.221401058.56110-0.825806.254304.87020K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A19 is not available on ENCORE database.





13 RBPs can affect the splicing of SLC25A19 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A19ENSG00000125454.7chr17-7328458273284672732827137328288373285434732854710.251000.006990.09850includedK562SRSF1
SESLC25A19ENSG00000125454.7chr17-7328299573283114732827277328288373284582732846720.292000.000580.05103includedK562XRCC6
SESLC25A19ENSG00000125454.7chr17-7328458273284672732827137328288373285434732854710.234000.000260.06585includedK562PUM1
SESLC25A19ENSG00000125454.7chr17-732844687328454273282713732828837328543473285467-0.437000.000540.00841excludedHepG2U2AF2
SESLC25A19ENSG00000125454.7chr17-732734337327356473269073732697207327950373279674-0.097000.000690.00896excludedK562AQR
SESLC25A19ENSG00000125454.7chr17-732844687328454273282713732828837328543473285492-0.262000.000390.06889excludedK562MTPAP
SESLC25A19ENSG00000125454.7chr17-732844687328467273282713732828837328543473285487-0.181000.001000.06349excludedK562HNRNPL
SESLC25A19ENSG00000125454.7chr17-732844687328454273282713732828837328543473285492-0.376000.002810.04591excludedK562U2AF2
SESLC25A19ENSG00000125454.7chr17-732827137328288373282415732825407328543473285471-0.145000.000210.01089excludedK562HNRNPU
SESLC25A19ENSG00000125454.7chr17-7328458273284672732827137328288373285434732854710.239000.004710.06628includedK562HNRNPC
A3SSSLC25A19ENSG00000125454.7chr17-7327343373273611732734337327356473274232732744160.151000.000000.00000longerK562AQR
A5SSSLC25A19ENSG00000125454.7chr17-732844687328467273284582732846727328271373282883-0.451000.000000.00394shorterHepG2DDX59
A5SSSLC25A19ENSG00000125454.7chr17-732844687328467273284582732846727328271373282883-0.355000.001360.07658shorterHepG2SRSF1
A5SSSLC25A19ENSG00000125454.7chr17-732844687328467273284582732846727328271373282883-0.398000.000830.08177shorterK562PTBP1
A5SSSLC25A19ENSG00000125454.7chr17-732844687328467273284582732846727328271373282883-0.222000.000180.07284shorterK562EIF4G2
A5SSSLC25A19ENSG00000125454.7chr17-732844687328467273284582732846727328271373282883-0.598000.000000.00000shorterK562SRSF1
MXESLC25A19ENSG00000125454.7chr17-73282384732825407328271373282883732795037327967473284582732846720.310000.000000.000201includedK562SRSF1
MXESLC25A19ENSG00000125454.7chr17-73282713732828837328458273284672732823847328254073285434732854710.225000.000070.002011includedK562SRSF1
MXESLC25A19ENSG00000125454.7chr17-73282713732828837328458273284672732823847328254073285434732854710.247000.000560.012611includedK562HNRNPC
MXESLC25A19ENSG00000125454.7chr17-73282713732828837328458273284672732823847328254073285434732854710.288000.000250.011801includedK562DHX30

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A19 is not avaliable on ENCORE database.