SLC25A12

General Information

Gene Name       : SLC25A12
Gene ID             : ENSG00000115840.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SLC25A12)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SLC25A12ENSG00000115840.1326.2124.7825.50ENCSR000AEF
HepG2SLC25A12ENSG00000115840.139.1612.8811.02ENCSR985KAT
K562SLC25A12ENSG00000115840.1314.6814.5914.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SLC25A12 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SLC25A12 RNA is bound by 5 proteins.  







eCLIP assay for SLC25A12 is not avaliable on ENCORE database.





5 proteins are bound to SLC25A12 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2172641441172641499-3'-UTR,intron-Distal5.6230824.39476K562PUM2
chr2172641381172641429-3'-UTR,intron-Distal4.240316.21733K562PUM2
chr2172669961172670027-3'-UTR,CDS,intron-Distal,intron-Proximal3.566613.32861HepG2U2AF2
chr2172666804172666892-intron-Distal,intron-Proximal3.778043.45805K562KHSRP
chr2172670031172670131-intron-Distal,intron-Proximal3.799513.24603K562KHSRP
chr2172708865172708972-intron-Distal3.396563.68839K562KHSRP
chr2172855144172855237-intron-Distal5.096655.04227HepG2HNRNPL
chr2172693374172693484-intron-Distal4.404905.54597K562TARDBP
chr2172691668172691791-intron-Distal4.412773.42844K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SLC25A12 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SLC25A12 is not available on ENCORE database.

  • 88 RBPs can affect the levels of SLC25A12.  








The Knockdown/knockout RNA-Seq assay for SLC25A12 is not available on ENCORE database.





88 RBPs can affect the gene expression of SLC25A12 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SLC25A12ENSG00000115840.9469.98080304.850800.624404.381303.05910HepG2AATF
SLC25A12ENSG00000115840.9171.33510253.70690-0.566302.164401.32890HepG2ABCF1
SLC25A12ENSG00000115840.9344.48320258.001200.417002.577001.98690HepG2ACO1
SLC25A12ENSG00000115840.9986.75470380.534801.3746018.1100016.87690HepG2AKAP1
SLC25A12ENSG00000115840.9653.46110314.871601.0532011.422409.90900HepG2ASCC1
SLC25A12ENSG00000115840.9657.71670528.887500.314402.367201.72330HepG2AUH
SLC25A12ENSG00000115840.9294.96090190.095800.633703.641602.23990HepG2BUD13
SLC25A12ENSG00000115840.9363.98220257.973200.496503.616602.87380HepG2CKAP4
SLC25A12ENSG00000115840.961.56870227.22570-1.8839012.3547011.01860HepG2CPSF6
SLC25A12ENSG00000115840.9320.67600524.34700-0.709407.266406.31790HepG2CELF1
SLC25A12ENSG00000115840.9380.81120563.73660-0.565905.912004.88610HepG2DAZAP1
SLC25A12ENSG00000115840.9175.88320336.61150-0.936505.814504.87120HepG2DDX21
SLC25A12ENSG00000115840.9599.32660364.547200.717105.541704.68410HepG2DDX3X
SLC25A12ENSG00000115840.9503.22760376.262100.419401.999101.33050HepG2DDX55
SLC25A12ENSG00000115840.9111.92410250.66610-1.163208.234506.58600HepG2DDX5
SLC25A12ENSG00000115840.9544.18710313.098000.797405.911605.03780HepG2DDX6
SLC25A12ENSG00000115840.9200.12000365.07050-0.867307.997906.85230HepG2DNAJC21
SLC25A12ENSG00000115840.9211.23450361.89390-0.776707.790106.76740HepG2DNAJC2
SLC25A12ENSG00000115840.9206.32850301.04380-0.545002.420401.86420HepG2EIF2S1
SLC25A12ENSG00000115840.9283.79770192.470400.560102.793501.61870HepG2EIF2S2
SLC25A12ENSG00000115840.9200.51850317.72670-0.664104.409103.07860HepG2EIF3G
SLC25A12ENSG00000115840.9138.59820332.71550-1.263409.948408.75420HepG2EIF4A3
SLC25A12ENSG00000115840.9221.63630323.89430-0.547302.108001.50370HepG2EIF4B
SLC25A12ENSG00000115840.9819.02900556.216900.558207.201105.96650HepG2EIF4G1
SLC25A12ENSG00000115840.9406.61080532.81010-0.390002.075901.36290HepG2EIF4G2
SLC25A12ENSG00000115840.9131.25480219.78470-0.743703.469002.25230HepG2ESF1
SLC25A12ENSG00000115840.9587.67890256.186301.1977010.901509.51630HepG2FIP1L1
SLC25A12ENSG00000115840.9455.11030335.615200.439302.217201.59520HepG2FXR1
SLC25A12ENSG00000115840.950.25820257.59870-2.3577020.3435018.78190HepG2GPKOW
SLC25A12ENSG00000115840.9165.86850368.56850-1.1519010.149809.02870HepG2HNRNPA1
SLC25A12ENSG00000115840.9756.65120518.121500.546206.658805.31620HepG2HNRNPA2B1
SLC25A12ENSG00000115840.9224.31560409.98000-0.870006.683105.64500HepG2HNRNPC
SLC25A12ENSG00000115840.9346.28050447.66740-0.370502.096901.46600HepG2HNRNPF
SLC25A12ENSG00000115840.9506.53660315.196000.684305.047504.12470HepG2HNRNPK
SLC25A12ENSG00000115840.9106.99390245.82930-1.200107.464306.48880HepG2HNRNPLL
SLC25A12ENSG00000115840.9618.25350407.268300.602107.085606.15070HepG2HNRNPU
SLC25A12ENSG00000115840.9241.02930440.83210-0.871005.662404.66510HepG2IGF2BP1
SLC25A12ENSG00000115840.9332.01000416.00840-0.325402.188201.52770HepG2ILF2
SLC25A12ENSG00000115840.9144.18620335.73210-1.219409.753108.54010HepG2MAGOH
SLC25A12ENSG00000115840.9296.45180207.354900.515602.560901.78150HepG2MSI2
SLC25A12ENSG00000115840.9518.59830345.587900.585503.630902.90860HepG2NCBP2
SLC25A12ENSG00000115840.999.11660217.95970-1.136906.284605.18350HepG2NSUN2
SLC25A12ENSG00000115840.9118.53280249.63080-1.074503.017702.08770HepG2PABPC1
SLC25A12ENSG00000115840.9613.80630351.145500.805609.210508.20790HepG2PCBP1
SLC25A12ENSG00000115840.9705.92250411.933800.777005.309803.90290HepG2PCBP2
SLC25A12ENSG00000115840.9256.97460363.24800-0.499303.318702.51730HepG2PPIL4
SLC25A12ENSG00000115840.9588.54670357.288600.720008.305607.46330HepG2PTBP1
SLC25A12ENSG00000115840.9209.50770533.63590-1.3489017.6878016.35730HepG2PUF60
SLC25A12ENSG00000115840.9755.61690566.499200.415504.974704.22660HepG2PUM1
SLC25A12ENSG00000115840.9325.80790566.07220-0.797008.203007.07450HepG2PUM2
SLC25A12ENSG00000115840.9259.96150397.52650-0.612802.340401.68830HepG2RAVER1
SLC25A12ENSG00000115840.9456.55180276.336800.724306.499705.25350HepG2RBM15
SLC25A12ENSG00000115840.9302.68150411.82620-0.444202.218701.49790HepG2RPS2
SLC25A12ENSG00000115840.9458.86900287.161100.676104.162203.22100HepG2RRP9
SLC25A12ENSG00000115840.9156.67490362.68120-1.2109011.6090010.43030HepG2SAFB2
SLC25A12ENSG00000115840.9517.97530372.010600.477403.647902.98230HepG2SF3B4
SLC25A12ENSG00000115840.9383.53670511.71700-0.416003.199702.45380HepG2SLBP
SLC25A12ENSG00000115840.9167.81530270.74790-0.690102.556001.80560HepG2SNRNP70
SLC25A12ENSG00000115840.9802.01230573.246500.484405.829105.17620HepG2SRFBP1
SLC25A12ENSG00000115840.9410.67580526.91300-0.359602.378601.79280HepG2SRSF5
SLC25A12ENSG00000115840.9263.50770439.79250-0.739004.416603.56930HepG2SRSF7
SLC25A12ENSG00000115840.9491.18500315.883100.636806.503105.72090HepG2SRSF9
SLC25A12ENSG00000115840.9277.03570497.70530-0.8452010.368109.49760HepG2SSB
SLC25A12ENSG00000115840.9400.30550279.054000.520502.667801.40740HepG2SSRP1
SLC25A12ENSG00000115840.994.11720173.00170-0.878304.522503.33490HepG2SUPT6H
SLC25A12ENSG00000115840.9181.96570374.57330-1.041606.749305.76570HepG2SUPV3L1
SLC25A12ENSG00000115840.9584.58080348.977400.744208.374107.48340HepG2TAF15
SLC25A12ENSG00000115840.9222.94540395.67850-0.827607.325106.58230HepG2TIAL1
SLC25A12ENSG00000115840.9300.01610399.27860-0.412402.852002.28190HepG2TRIM56
SLC25A12ENSG00000115840.9385.31120521.37410-0.436302.679501.82130HepG2TUFM
SLC25A12ENSG00000115840.9346.13110175.874600.9767010.219609.02620HepG2UPF1
SLC25A12ENSG00000115840.9213.35920343.02110-0.685002.751201.74970HepG2UPF2
SLC25A12ENSG00000115840.9590.42190390.906800.594803.013501.69260HepG2XRCC5
SLC25A12ENSG00000115840.9221.45980368.72600-0.735504.143003.26360HepG2XRN2
SLC25A12ENSG00000115840.9299.14700193.428700.629004.618103.95770HepG2ZNF622
SLC25A12ENSG00000115840.9269.76800397.16140-0.558002.748201.45640HepG2ZRANB2
SLC25A12ENSG00000115840.9934.27830789.075200.243601.794201.31670K562AGGF1
SLC25A12ENSG00000115840.9595.438601030.83890-0.791809.654408.66250K562AQR
SLC25A12ENSG00000115840.9763.55380943.03790-0.304602.451401.35630K562CCDC124
SLC25A12ENSG00000115840.9924.710101456.14790-0.655109.149207.41950K562CELF1
SLC25A12ENSG00000115840.9623.92970833.86890-0.418404.313903.52560K562DDX47
SLC25A12ENSG00000115840.9631.48580500.333700.335802.455701.87910K562FXR1
SLC25A12ENSG00000115840.9788.938901000.49410-0.342702.409101.70150K562GRSF1
SLC25A12ENSG00000115840.9757.53530539.908600.488503.187402.18370K562HNRNPM
SLC25A12ENSG00000115840.9502.98800611.50960-0.281902.011901.31680K562MTPAP
SLC25A12ENSG00000115840.9352.94650473.71640-0.424602.218801.41610K562PSIP1
SLC25A12ENSG00000115840.9871.501901292.42180-0.568505.440604.29840K562PUF60
SLC25A12ENSG00000115840.92007.894801374.424700.546809.305707.28320K562PUM1
SLC25A12ENSG00000115840.9512.37100679.44900-0.407202.813501.96610K562RBM22
SLC25A12ENSG00000115840.9363.25520597.72220-0.718502.727501.44210K562SFPQ
SLC25A12ENSG00000115840.9471.31690686.87400-0.543306.469805.11000K562SRPK2
SLC25A12ENSG00000115840.9324.41970484.07560-0.577404.051102.86170K562TRIM56
SLC25A12ENSG00000115840.9873.420601161.32030-0.411003.652002.63450K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SLC25A12 is not available on ENCORE database.





7 RBPs can affect the splicing of SLC25A12 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESLC25A12ENSG00000115840.9chr2-172644080172644171172640879172641985172644298172644457-0.135000.000070.00132excludedK562AQR
SESLC25A12ENSG00000115840.9chr2-172666733172666786172666115172666196172683307172683392-0.125000.003130.03175excludedK562AQR
SESLC25A12ENSG00000115840.9chr2-172669848172670030172666733172666786172671630172671712-0.124000.007830.08727excludedK562PUS1
SESLC25A12ENSG00000115840.9chr2-1727046821727047861727008781727010181727123431727124590.055000.000080.02263includedK562LARP4
SESLC25A12ENSG00000115840.9chr2-1726698481726700071726667331726667861726716301726717120.122000.000060.01934includedK562APOBEC3C
SESLC25A12ENSG00000115840.9chr2-1727046821727047861727008781727010181727123431727124590.095000.005620.07958includedK562U2AF2
SESLC25A12ENSG00000115840.9chr2-172669848172670007172666733172666786172671630172671712-0.134000.000270.00991excludedK562AGGF1
A3SSSLC25A12ENSG00000115840.9chr2-1726667331726668191726667331726667861726698481726700300.062000.002450.01540longerK562AQR
A3SSSLC25A12ENSG00000115840.9chr2-1726501361726503241726501361726502771726661151726661960.064000.000850.00604longerK562AQR
A3SSSLC25A12ENSG00000115840.9chr2-1726440801726442001726440801726441711726442981726444570.069000.007910.04320longerK562AQR
MXESLC25A12ENSG00000115840.9chr2-172712343172712459172725190172725333172700878172701018172749714172749768-0.209000.008910.057652includedK562AQR
MXESLC25A12ENSG00000115840.9chr2-172669848172670007172671630172671712172666733172666786172683307172683392-0.260000.000400.017882includedHepG2XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SLC25A12 is not avaliable on ENCORE database.