SFT2D2

General Information

Gene Name       : SFT2D2
Gene ID             : ENSG00000213064.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SFT2D2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SFT2D2ENSG00000213064.99.898.409.14ENCSR000AEF
HepG2SFT2D2ENSG00000213064.95.476.786.12ENCSR985KAT
K562SFT2D2ENSG00000213064.96.657.186.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SFT2D2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SFT2D2 RNA is bound by 10 proteins.  







eCLIP assay for SFT2D2 is not avaliable on ENCORE database.





10 proteins are bound to SFT2D2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1168212021168212135+3'-UTR5.029315.94150HepG2UPF1
chr1168212135168212239+3'-UTR3.704763.50315HepG2UPF1
chr1168208357168208398+3'-UTR,CDS,intron-Proximal3.260444.14020K562BUD13
chr1168212160168212239+3'-UTR5.067927.21253K562UPF1
chr1168211736168211773+3'-UTR,CDS,intron-Proximal4.568364.76200K562BUD13
chr1168208320168208404+3'-UTR,CDS,intron-Proximal3.630635.02403K562SF3B4
chr1168195272168195335+5'-UTR,CDS5.892727.49422HepG2DDX3X
chr1168195253168195338+5'-UTR,CDS3.9119912.21906K562DDX3X
chr1168205948168205993+CDS,intron-Proximal4.461886.47873K562SND1
chr1168204413168204455+CDS,intron-Distal,intron-Proximal4.635685.70555K562PRPF8
chr1168205830168205863+CDS,intron-Proximal5.273346.53278K562SND1
chr1168204419168204465+CDS,intron-Distal,intron-Proximal4.681374.48002K562AQR
chr1168205527168205620+intron-Distal3.363374.16402K562TARDBP
chr1168202899168202967+intron-Distal4.249733.59917K562EXOSC5
chr1168206113168206191+intron-Distal4.461815.32062K562EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SFT2D2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SFT2D2 is not available on ENCORE database.

  • 104 RBPs can affect the levels of SFT2D2.  








The Knockdown/knockout RNA-Seq assay for SFT2D2 is not available on ENCORE database.





104 RBPs can affect the gene expression of SFT2D2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SFT2D2ENSG00000213064.5764.576901164.48220-0.607004.715504.04390HepG2AKAP1
SFT2D2ENSG00000213064.51364.466201059.929000.364304.652903.67830HepG2AKAP8L
SFT2D2ENSG00000213064.5691.993801529.41660-1.1442036.8537034.85630HepG2AUH
SFT2D2ENSG00000213064.5599.15100890.87760-0.572303.722302.69250HepG2BCLAF1
SFT2D2ENSG00000213064.5587.27740800.12040-0.446203.279502.63400HepG2BOP1
SFT2D2ENSG00000213064.51114.88010868.304000.360503.002902.20130HepG2CALR
SFT2D2ENSG00000213064.51547.97580915.409400.757809.377508.02580HepG2CIRBP
SFT2D2ENSG00000213064.51140.11670685.488200.733904.867803.84800HepG2CNOT7
SFT2D2ENSG00000213064.5550.63850734.57120-0.415802.607101.93760HepG2CPSF6
SFT2D2ENSG00000213064.5583.29060828.90120-0.507005.678804.22140HepG2YBX3
SFT2D2ENSG00000213064.51119.443501285.35010-0.199402.249201.57080HepG2DAZAP1
SFT2D2ENSG00000213064.51030.75490820.034200.329802.260701.63930HepG2DDX21
SFT2D2ENSG00000213064.5797.922601115.51120-0.483403.671002.96060HepG2DDX3X
SFT2D2ENSG00000213064.5616.94630799.36060-0.373702.457901.50220HepG2DDX5
SFT2D2ENSG00000213064.5566.93050958.18750-0.757106.671505.74580HepG2DDX6
SFT2D2ENSG00000213064.5591.28030785.06160-0.409003.055302.03000HepG2DHX30
SFT2D2ENSG00000213064.5558.92840813.97880-0.542306.385905.35480HepG2DNAJC21
SFT2D2ENSG00000213064.5510.23870806.70410-0.6609011.100009.89260HepG2DNAJC2
SFT2D2ENSG00000213064.51876.381301018.049900.8820010.949709.70670HepG2EIF4A3
SFT2D2ENSG00000213064.5557.24350991.15970-0.830806.633505.60060HepG2EIF4B
SFT2D2ENSG00000213064.51007.265601267.92220-0.332004.104103.12230HepG2EIF4G1
SFT2D2ENSG00000213064.51435.952001756.02540-0.290303.567402.89820HepG2ETF1
SFT2D2ENSG00000213064.51354.488301030.890500.393803.778302.80190HepG2EWSR1
SFT2D2ENSG00000213064.5249.72190464.38720-0.895008.176306.14690HepG2FAM120A
SFT2D2ENSG00000213064.51480.825201027.082900.527704.692903.80760HepG2FXR1
SFT2D2ENSG00000213064.51319.152601011.476300.383002.784101.89100HepG2G3BP2
SFT2D2ENSG00000213064.5559.44090905.94040-0.695404.777603.43770HepG2GNB2L1
SFT2D2ENSG00000213064.5525.24640821.77590-0.645806.247505.33500HepG2HNRNPA1
SFT2D2ENSG00000213064.5683.98120964.70560-0.496104.028603.19980HepG2HNRNPK
SFT2D2ENSG00000213064.51021.741701170.91000-0.196602.088901.49290HepG2HNRNPL
SFT2D2ENSG00000213064.5710.40100908.00390-0.354103.749703.05440HepG2HNRNPU
SFT2D2ENSG00000213064.51468.15150968.532500.600005.986905.03090HepG2IGF2BP2
SFT2D2ENSG00000213064.51753.96940908.860600.948404.043102.85650HepG2IGF2BP3
SFT2D2ENSG00000213064.51370.280401027.441100.415303.072502.38110HepG2MAGOH
SFT2D2ENSG00000213064.5924.83670727.566500.346002.641801.85140HepG2MSI2
SFT2D2ENSG00000213064.51606.704301057.554900.603305.694004.80080HepG2NCBP2
SFT2D2ENSG00000213064.5974.531601274.54090-0.387204.440003.47500HepG2NOL12
SFT2D2ENSG00000213064.51243.82810941.874300.401102.796702.07090HepG2PABPC4
SFT2D2ENSG00000213064.51353.89770937.337100.530409.279808.27410HepG2PCBP1
SFT2D2ENSG00000213064.5566.74510809.87200-0.515005.839304.80020HepG2PPIL4
SFT2D2ENSG00000213064.51486.018601291.428000.202402.036001.51170HepG2PUM1
SFT2D2ENSG00000213064.5920.584201290.52090-0.487306.119805.13530HepG2PUM2
SFT2D2ENSG00000213064.5696.969201032.90010-0.567505.203204.38640HepG2QKI
SFT2D2ENSG00000213064.51209.45910988.711500.290603.090002.44380HepG2RECQL
SFT2D2ENSG00000213064.5773.56040954.91860-0.303901.928701.34600HepG2RPLP0
SFT2D2ENSG00000213064.51480.045901014.115400.545303.188401.54840HepG2RTF1
SFT2D2ENSG00000213064.5479.62130808.63470-0.7536012.8352011.59860HepG2SAFB2
SFT2D2ENSG00000213064.51838.708801118.544300.717006.010204.99250HepG2SF3A3
SFT2D2ENSG00000213064.51224.89260992.958700.302703.273402.63640HepG2SF3B4
SFT2D2ENSG00000213064.5866.842201166.42050-0.428206.738205.72050HepG2SLBP
SFT2D2ENSG00000213064.5779.31060943.03340-0.275102.856102.20350HepG2SMN1
SFT2D2ENSG00000213064.51333.837801657.69650-0.313604.513603.91830HepG2SRFBP1
SFT2D2ENSG00000213064.52290.341901036.477501.1438047.1469045.71310HepG2SRSF1
SFT2D2ENSG00000213064.51120.49130846.327300.404702.335201.42530HepG2SRSF3
SFT2D2ENSG00000213064.51982.159001439.240500.461708.897308.07900HepG2SSB
SFT2D2ENSG00000213064.5305.51060600.47570-0.974907.865705.92740HepG2STAU1
SFT2D2ENSG00000213064.5813.009901366.10540-0.7487019.1308017.73230HepG2SUCLG1
SFT2D2ENSG00000213064.5383.15950607.03300-0.663804.763103.54560HepG2SUPT6H
SFT2D2ENSG00000213064.5675.781901003.43380-0.570303.738702.96940HepG2SUPV3L1
SFT2D2ENSG00000213064.5490.68160672.60640-0.455002.495501.54250HepG2TFIP11
SFT2D2ENSG00000213064.5601.02950890.17560-0.566708.387907.49060HepG2TRIM56
SFT2D2ENSG00000213064.51227.71960768.878600.675107.725306.68000HepG2U2AF1
SFT2D2ENSG00000213064.5682.526501257.92700-0.882109.793508.17910HepG2UBE2L3
SFT2D2ENSG00000213064.5783.490401019.62190-0.380004.162402.90960HepG2UTP18
SFT2D2ENSG00000213064.51168.70310957.716200.287102.921102.30910HepG2UTP3
SFT2D2ENSG00000213064.51010.11290743.583400.441904.440503.62110HepG2ZC3H8
SFT2D2ENSG00000213064.51465.070701090.986100.425207.821007.02270HepG2ZNF622
SFT2D2ENSG00000213064.52035.718401760.784900.209202.192501.67750K562AGGF1
SFT2D2ENSG00000213064.5912.647901263.70050-0.469506.450104.10070K562AKAP1
SFT2D2ENSG00000213064.53171.660302516.403800.333802.782802.19330K562AQR
SFT2D2ENSG00000213064.51221.765701477.85030-0.274502.587801.33020K562BCCIP
SFT2D2ENSG00000213064.51076.103501428.03830-0.408205.777004.37590K562BCLAF1
SFT2D2ENSG00000213064.5538.55340987.86320-0.8752013.4609011.71520K562CPSF6
SFT2D2ENSG00000213064.5806.290301083.37960-0.426204.200602.86200K562CSTF2
SFT2D2ENSG00000213064.51176.767901449.58690-0.300803.247501.93130K562DDX21
SFT2D2ENSG00000213064.51084.270401356.79820-0.323503.369701.35880K562DDX24
SFT2D2ENSG00000213064.5987.049701252.28650-0.343403.912702.30820K562DDX27
SFT2D2ENSG00000213064.5841.287201280.49430-0.606007.901406.05420K562DDX3X
SFT2D2ENSG00000213064.51535.406702065.56590-0.427907.484006.48310K562DDX47
SFT2D2ENSG00000213064.51162.579901406.57240-0.274902.858401.62570K562EIF2S1
SFT2D2ENSG00000213064.51191.370401437.37900-0.270802.622801.84640K562EIF3G
SFT2D2ENSG00000213064.5874.772601204.80340-0.461805.661303.91810K562EIF4B
SFT2D2ENSG00000213064.51047.169101613.67550-0.623907.819606.32150K562FIP1L1
SFT2D2ENSG00000213064.51775.033301391.283300.351304.588903.83660K562FXR1
SFT2D2ENSG00000213064.51796.644901332.432400.431102.747202.04360K562G3BP2
SFT2D2ENSG00000213064.51273.933302115.27670-0.7316012.1357010.53240K562GRSF1
SFT2D2ENSG00000213064.51179.745701642.81880-0.477705.765104.23880K562HNRNPA1
SFT2D2ENSG00000213064.5750.06800989.89790-0.400303.201201.96820K562HNRNPF
SFT2D2ENSG00000213064.51018.457201327.28790-0.382102.538801.64910K562HNRNPM
SFT2D2ENSG00000213064.51289.767302187.77790-0.7624011.7020010.09290K562HSPD1
SFT2D2ENSG00000213064.5808.890101073.37650-0.408103.310401.75850K562LARP7
SFT2D2ENSG00000213064.5856.028601124.24170-0.393202.944901.43960K562LIN28B
SFT2D2ENSG00000213064.5691.38100988.39050-0.515605.006602.86890K562LSM11
SFT2D2ENSG00000213064.51039.742501598.75040-0.6207013.2937011.68480K562MTPAP
SFT2D2ENSG00000213064.51981.767301526.788700.376202.219201.44980K562NAA15
SFT2D2ENSG00000213064.51449.743501776.34170-0.293104.753303.81100K562NSUN2
SFT2D2ENSG00000213064.52279.915201687.718600.433804.533303.27400K562PCBP2
SFT2D2ENSG00000213064.51038.271601831.86500-0.8191012.5797010.44310K562PPIG
SFT2D2ENSG00000213064.5754.84190993.91900-0.397003.282002.28510K562PSIP1
SFT2D2ENSG00000213064.52470.696301842.661100.423005.358504.46060K562PTBP1
SFT2D2ENSG00000213064.54425.692002759.896600.6812012.3941010.65700K562PUF60
SFT2D2ENSG00000213064.53449.979102935.348200.233002.467401.46360K562PUM1
SFT2D2ENSG00000213064.52505.109501817.099300.463104.763104.07510K562PUS1
SFT2D2ENSG00000213064.52095.855301770.409800.243402.319901.76890K562RBM15
SFT2D2ENSG00000213064.52540.582201767.367400.523506.468005.11080K562RBM22
SFT2D2ENSG00000213064.51164.144601415.60370-0.282103.422701.66300K562RPS10
SFT2D2ENSG00000213064.5955.966001408.07290-0.558704.485303.44160K562RPS19
SFT2D2ENSG00000213064.51016.311701413.40430-0.475802.842701.49760K562RRP9
SFT2D2ENSG00000213064.51698.32580921.043600.882703.966802.45010K562SF1
SFT2D2ENSG00000213064.5594.59210859.60180-0.531804.681703.24900K562SRFBP1
SFT2D2ENSG00000213064.53374.617401806.324600.9016022.3671020.36520K562SRSF1
SFT2D2ENSG00000213064.5796.302301027.70530-0.368002.247501.31690K562SRSF4
SFT2D2ENSG00000213064.51154.650601936.45560-0.746009.461407.07830K562STAU1
SFT2D2ENSG00000213064.5717.72790955.98980-0.413602.734301.80400K562TIAL1
SFT2D2ENSG00000213064.5748.453701015.56060-0.440303.660202.54450K562TRIM56
SFT2D2ENSG00000213064.51883.137701292.055800.543404.913403.37140K562U2AF1
SFT2D2ENSG00000213064.51801.974101334.250200.433405.509304.37920K562U2AF2
SFT2D2ENSG00000213064.51580.122501883.49380-0.253403.153002.38890K562UPF1
SFT2D2ENSG00000213064.51264.067201675.93530-0.406907.100705.80350K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SFT2D2 is not available on ENCORE database.





3 RBPs can affect the splicing of SFT2D2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESFT2D2ENSG00000213064.5chr1+168205826168205862168204338168204420168205949168206008-0.234000.010740.08590excludedK562AQR
SESFT2D2ENSG00000213064.5chr1+168205949168206008168195245168195380168208368168208398-0.304000.008840.09584excludedK562PUS1
MXESFT2D2ENSG00000213064.5chr1+168200751168200838168204338168204420168195245168195380168205826168205862-0.308000.000640.058732includedHepG2SSB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SFT2D2 is not avaliable on ENCORE database.