SCLY

General Information

Gene Name       : SCLY
Gene ID             : ENSG00000132330.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SCLY)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SCLYENSG00000132330.1614.0215.1914.61ENCSR000AEF
HepG2SCLYENSG00000132330.1632.3025.7229.01ENCSR985KAT
K562SCLYENSG00000132330.1615.0417.9916.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SCLY is not avaliable on ENCORE database.



Proteins bound to RNA
  • SCLY RNA is bound by 20 proteins.  







eCLIP assay for SCLY is not avaliable on ENCORE database.





20 proteins are bound to SCLY RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2238990337238990400+3'-UTR,CDS,intron-Distal,intron-Proximal3.816855.55825HepG2U2AF2
chr2238990630238990704+3'-UTR,CDS,intron-Distal,intron-Proximal3.863374.36528HepG2U2AF2
chr2238990792238990878+3'-UTR,CDS,intron-Distal,intron-Proximal3.435966.20926HepG2PPIG
chr2238990450238990475+3'-UTR,CDS,intron-Distal4.223454.08604HepG2PPIG
chr2238990717238990772+3'-UTR,CDS,intron-Distal3.244714.38582HepG2SRSF1
chr2238991884238991933+3'-UTR,CDS,intron-Distal,intron-Proximal,polyA_site4.363373.79000HepG2U2AF2
chr2239003137239003216+3'-UTR,CDS,intron-Proximal3.8884016.24651HepG2PRPF8
chr2238999850238999973+3'-UTR,CDS,intron-Distal,intron-Proximal4.623634.09264K562AQR
chr2239003178239003236+3'-UTR,CDS,intron-Proximal4.384433.85435K562PRPF8
chr2238978116238978163+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.204035.73990HepG2PRPF8
chr2238990712238990787+3'-UTR,CDS,intron-Distal3.535265.58370HepG2PPIG
chr2238976714238976825+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.215075.91405HepG2BCLAF1
chr2238969666238969781+5'-UTR,CDS,intron-Distal5.6224827.14411HepG2NCBP2
chr2238976705238976813+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.208264.05271HepG2PPIG
chr2238973001238973127+3'-UTR,5'-UTR,CDS,intron-Proximal5.093117.39496HepG2BCLAF1
chr2238969684238969777+5'-UTR,CDS,intron-Distal3.973754.61051HepG2DDX3X
chr2238973054238973108+3'-UTR,5'-UTR,CDS4.245647.49899HepG2PPIG
chr2238999836238999915+3'-UTR,CDS,intron-Distal,intron-Proximal3.354957.61543HepG2U2AF2
chr2239002581239002638+3'-UTR,CDS,intron-Distal,intron-Proximal4.715045.32906HepG2AQR
chr2239003133239003175+3'-UTR,CDS,intron-Proximal3.573673.64266HepG2PPIG
chr2239002581239002641+3'-UTR,CDS,intron-Distal,intron-Proximal3.204034.97939HepG2PRPF8
chr2239005441239005459+3'-UTR,CDS,intron-Proximal3.313733.59112HepG2PPIG
chr2239002486239002652+3'-UTR,CDS,intron-Distal,intron-Proximal3.698608.74772HepG2PPIG
chr2238995190238995276+intron-Distal3.928535.84561HepG2HLTF
chr2239002680239002724+intron-Distal,intron-Proximal3.738635.34337K562AQR
chr2238980953238981010+intron-Distal4.127163.62366HepG2HNRNPM
chr2238993972238994098+intron-Distal3.904213.43228K562SAFB2
chr2239001983239002061+intron-Distal4.594784.83379HepG2HNRNPK
chr2238995193238995266+intron-Distal3.276384.34612K562SAFB2
chr2238981106238981182+intron-Distal4.145233.27829HepG2MATR3
chr2238988995238989032+intron-Distal3.885023.63454HepG2SUGP2
chr2238995819238995875+intron-Distal3.089503.07152HepG2HLTF
chr2238989049238989145+intron-Distal3.863836.25586HepG2SUGP2
chr2239006281239006347+intron-Distal4.609845.84605HepG2CSTF2T
chr2239001915239001983+intron-Distal4.399085.31936HepG2HNRNPK
chr2238981525238981616+intron-Distal5.155047.71416K562EXOSC5
chr2238981038238981087+intron-Distal4.007023.01456K562EXOSC5
chr2238981109238981159+intron-Distal4.059523.84389HepG2SUGP2
chr2239002640239002722+intron-Distal,intron-Proximal4.423568.96810HepG2BUD13
chr2238996476238996535+intron-Distal4.010984.51328K562SAFB2
chr2238981236238981288+intron-Distal3.903793.01456K562EXOSC5
chr2239005824239005862+intron-Distal3.866353.16310HepG2CSTF2T
chr2238984752238984811+intron-Distal4.216573.80778HepG2QKI
chr2239001676239001782+intron-Distal5.7160213.63136HepG2HNRNPK
chr2239002631239002714+intron-Distal,intron-Proximal5.738118.08771HepG2EFTUD2
chr2239002588239002680+intron-Distal,intron-Proximal4.2860912.02505K562AQR
chr2238989057238989161+intron-Distal3.422776.21102HepG2MATR3
chr2238992809238992887+intron-Distal4.350304.44649HepG2HLTF
chr2239005553239005618+intron-Distal,intron-Proximal3.478693.52528HepG2FAM120A
chr2238989056238989094+intron-Distal4.477383.27946HepG2HNRNPM
chr2239001430239001491+intron-Distal4.423544.87774HepG2HNRNPK
chr2238992459238992580+intron-Distal4.016283.84033K562SAFB2
chr2238983704238983773+intron-Distal3.118213.14999K562EXOSC5
chr2239002098239002196+intron-Distal3.865805.33975HepG2HNRNPK
chr2239002895239002941+intron-Distal4.056886.02363HepG2U2AF2
chr2238994900238994974+intron-Distal4.073754.58306K562SAFB2
chr2239005559239005614+intron-Proximal3.741905.08839HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SCLY is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SCLY is not available on ENCORE database.

  • 80 RBPs can affect the levels of SCLY.  








The Knockdown/knockout RNA-Seq assay for SCLY is not available on ENCORE database.





80 RBPs can affect the gene expression of SCLY :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SCLYENSG00000132330.12556.15720399.269900.478002.375501.87820HepG2AKAP1
SCLYENSG00000132330.12799.32940470.571600.764306.689105.11360HepG2AKAP8
SCLYENSG00000132330.12501.61200330.343600.602503.874302.95120HepG2ASCC1
SCLYENSG00000132330.12664.53020496.188700.421302.784901.37390HepG2ATP5C1
SCLYENSG00000132330.12179.04260326.39260-0.866305.288204.08250HepG2BCLAF1
SCLYENSG00000132330.121018.69620739.424700.462103.941903.24040HepG2BOP1
SCLYENSG00000132330.12380.78530512.16760-0.427602.667301.90960HepG2CALR
SCLYENSG00000132330.12741.12280359.992101.041607.850006.57300HepG2CNOT7
SCLYENSG00000132330.12358.77070279.560900.359801.967201.36340HepG2DNAJC21
SCLYENSG00000132330.12169.55290263.05420-0.633602.837301.71630HepG2AGO1
SCLYENSG00000132330.12208.44260315.80680-0.599402.893302.28750HepG2EIF2S1
SCLYENSG00000132330.12220.62850348.95810-0.661403.635402.90490HepG2EIF4A3
SCLYENSG00000132330.12679.49980339.846600.999507.874306.74350HepG2EIF4B
SCLYENSG00000132330.12340.67870453.08710-0.411402.298601.55220HepG2EIF4G2
SCLYENSG00000132330.12439.00140769.49870-0.809707.283106.27500HepG2GPKOW
SCLYENSG00000132330.12572.46290304.337300.911403.674802.08050HepG2HNRNPA0
SCLYENSG00000132330.12276.02580440.61580-0.674706.252904.94400HepG2HNRNPA2B1
SCLYENSG00000132330.12548.47310297.197200.883906.947804.62050HepG2HNRNPAB
SCLYENSG00000132330.12465.81440330.947300.493102.782902.08240HepG2HNRNPK
SCLYENSG00000132330.12430.54550734.34740-0.770307.233506.27150HepG2HNRNPLL
SCLYENSG00000132330.12232.89590383.06480-0.717905.213903.95390HepG2HNRNPM
SCLYENSG00000132330.12511.31010332.022000.622804.242403.42260HepG2IGF2BP2
SCLYENSG00000132330.12405.24580318.560000.347102.334801.65400HepG2ILF2
SCLYENSG00000132330.12755.80410511.940900.561903.234701.88050HepG2KRR1
SCLYENSG00000132330.12488.29770354.295200.462702.249701.67690HepG2MATR3
SCLYENSG00000132330.12274.90990377.31470-0.456802.487401.33710HepG2NAA15
SCLYENSG00000132330.12893.25110485.499400.879506.135304.01230HepG2NKRF
SCLYENSG00000132330.12672.27160493.669300.445403.293701.55040HepG2NUP35
SCLYENSG00000132330.12448.87610322.855300.475302.539701.84530HepG2PABPC4
SCLYENSG00000132330.12726.43940301.969701.2663020.7301019.31830HepG2PCBP1
SCLYENSG00000132330.12847.10840481.739900.8142015.7716014.59320HepG2PUM1
SCLYENSG00000132330.12309.99110481.40000-0.635004.602803.74890HepG2PUM2
SCLYENSG00000132330.12556.97730332.769300.743007.491706.53910HepG2QKI
SCLYENSG00000132330.12463.66620284.830400.702904.402403.13150HepG2RBM27
SCLYENSG00000132330.12456.51730341.958800.416702.704002.16760HepG2NELFE
SCLYENSG00000132330.12430.10900318.497900.433302.888702.26040HepG2RECQL
SCLYENSG00000132330.12352.32090533.56040-0.598804.755403.89170HepG2RPLP0
SCLYENSG00000132330.12344.86990223.244500.627302.565101.97140HepG2RPS19
SCLYENSG00000132330.12431.95190268.149700.687704.198502.86110HepG2RPS5
SCLYENSG00000132330.12365.53410223.980400.706504.365803.19670HepG2SERBP1
SCLYENSG00000132330.12426.10660319.898100.413502.623302.04460HepG2SF3B4
SCLYENSG00000132330.12314.54090435.11120-0.468103.806503.00400HepG2SLBP
SCLYENSG00000132330.12419.11650323.876200.371802.507101.89030HepG2SMN1
SCLYENSG00000132330.12390.16640265.750700.553902.759101.80450HepG2SMNDC1
SCLYENSG00000132330.12543.54370808.75480-0.573302.980402.16820HepG2SNRNP70
SCLYENSG00000132330.12377.46340271.657000.474503.476202.87320HepG2SRSF9
SCLYENSG00000132330.12355.31800591.53250-0.735309.527508.68730HepG2SSB
SCLYENSG00000132330.12450.64670314.368800.519402.709201.62030HepG2STIP1
SCLYENSG00000132330.12247.03020374.90470-0.601803.596602.53350HepG2SUPT6H
SCLYENSG00000132330.12172.95850367.66750-1.088007.825306.78200HepG2SUPV3L1
SCLYENSG00000132330.12730.42610305.745301.2563027.3350025.79570HepG2TRIM56
SCLYENSG00000132330.12827.05270389.935601.084603.400902.30190HepG2U2AF2
SCLYENSG00000132330.12336.39310217.183800.631103.565802.70710HepG2UCHL5
SCLYENSG00000132330.12205.78730336.63720-0.710003.471702.33990HepG2UPF2
SCLYENSG00000132330.12696.80580489.377500.509705.042203.67020HepG2UTP18
SCLYENSG00000132330.12701.83730459.669700.610407.692606.77490HepG2UTP3
SCLYENSG00000132330.12356.64240514.23810-0.528001.924801.34970HepG2ZC3H8
SCLYENSG00000132330.12457.31330617.07850-0.432302.801801.56920K562ABCF1
SCLYENSG00000132330.12222.96760345.96200-0.633802.823202.24990K562AGGF1
SCLYENSG00000132330.12268.05180359.97300-0.425401.918501.37030K562AKAP8L
SCLYENSG00000132330.12216.07060494.86800-1.1955011.1926010.12970K562AQR
SCLYENSG00000132330.12275.62180444.89570-0.690804.742203.58680K562BOP1
SCLYENSG00000132330.12303.55820473.03480-0.640005.341104.25910K562CPSF6
SCLYENSG00000132330.12510.45580699.97730-0.455503.512902.41120K562CELF1
SCLYENSG00000132330.12346.95360446.65780-0.364402.297201.63260K562EIF2S2
SCLYENSG00000132330.12367.86370240.396200.613702.524201.56780K562EIF3A
SCLYENSG00000132330.12346.35030481.33460-0.474802.907502.03060K562FMR1
SCLYENSG00000132330.12253.41470407.98870-0.687004.261803.10440K562FTO
SCLYENSG00000132330.12325.25440198.551900.712005.193204.40130K562FXR1
SCLYENSG00000132330.12277.03280451.61820-0.705005.484204.37180K562GPKOW
SCLYENSG00000132330.12170.57540364.78680-1.096608.427706.65770K562HNRNPM
SCLYENSG00000132330.12246.91750169.395700.543502.769401.92930K562MAGOH
SCLYENSG00000132330.12132.31950266.71560-1.011303.935602.69930K562PABPN1
SCLYENSG00000132330.12248.33150164.583900.593303.248102.53470K562PTBP1
SCLYENSG00000132330.12193.99990357.10960-0.880304.723304.03840K562PUS1
SCLYENSG00000132330.12221.87960347.85410-0.648702.535401.96440K562RBM15
SCLYENSG00000132330.12221.48810157.777400.489202.091401.36560K562RBM22
SCLYENSG00000132330.1256.03980109.82740-0.970703.419601.92670K562RBM25
SCLYENSG00000132330.12366.12140498.11240-0.444103.434102.53090K562SF3A3
SCLYENSG00000132330.12172.01970335.05630-0.961803.799602.02090K562SUPT6H
SCLYENSG00000132330.12462.30690328.200000.494203.433402.51990K562SYNCRIP
SCLYENSG00000132330.12437.05400535.24630-0.292401.906901.30270K562UPF1
SCLYENSG00000132330.12349.28360457.99270-0.390902.282201.48600K562WDR3
SCLYENSG00000132330.12382.08510476.26380-0.317902.136201.38520K562WDR43
SCLYENSG00000132330.12343.07860557.53530-0.700506.528605.11320K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SCLY is not available on ENCORE database.





1 RBPs can affect the splicing of SCLY :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXESCLYENSG00000132330.12chr2+238976705238976806238982423238982488238972997238973110238990349238990477-0.236000.000930.027512includedHepG2MATR3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SCLY is not avaliable on ENCORE database.