RER1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RER1	ENSG00000157916.19	119.59	116.97	118.28	ENCSR000AEF
HepG2	RER1	ENSG00000157916.19	119.65	106.10	112.88	ENCSR985KAT
K562	RER1	ENSG00000157916.19	216.31	217.06	216.69	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RER1 is not avaliable on ENCORE database.

Proteins bound to RNA

RER1 RNA is bound by 48 proteins.

eCLIP assay for RER1 is not avaliable on ENCORE database.

48 proteins are bound to RER1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	2334806	2334819	+	3'-UTR	4.04269	12.66213	K562	YBX3
chr1	2333770	2333846	+	3'-UTR,CDS,intron-Proximal	6.11009	13.18741	HepG2	PRPF8
chr1	2334486	2334649	+	3'-UTR,CDS	3.85459	9.08862	HepG2	LARP4
chr1	2334891	2334970	+	3'-UTR	5.29382	9.55678	HepG2	GRSF1
chr1	2334472	2334520	+	3'-UTR,CDS,intron-Proximal	3.56170	5.73361	K562	YBX3
chr1	2334798	2334806	+	3'-UTR	3.99067	12.02158	K562	YBX3
chr1	2334819	2334840	+	3'-UTR	4.59923	14.13637	K562	YBX3
chr1	2326219	2326296	+	5'-UTR,intron-Distal	3.35533	8.07946	HepG2	CSTF2T
chr1	2325489	2325543	+	5'-UTR,intron-Distal	4.94444	6.39998	K562	TAF15
chr1	2325879	2325956	+	5'-UTR,intron-Distal	3.31558	8.16845	K562	EWSR1
chr1	2326395	2326442	+	5'-UTR,intron-Distal	5.27369	8.13349	K562	SLTM
chr1	2327170	2327205	+	5'-UTR,intron-Proximal	4.10381	3.05889	HepG2	SF3B4
chr1	2325794	2325890	+	5'-UTR,intron-Distal	4.23417	11.11114	K562	FUS
chr1	2326455	2326490	+	5'-UTR,intron-Distal	4.63349	6.19429	HepG2	CSTF2T
chr1	2326727	2326774	+	5'-UTR,intron-Distal	4.05833	6.73995	HepG2	CSTF2T
chr1	2326213	2326307	+	5'-UTR,intron-Distal	3.22160	3.00054	HepG2	PRPF4
chr1	2325891	2325969	+	5'-UTR,intron-Distal	3.69784	11.30954	K562	CSTF2T
chr1	2323372	2323398	+	5'-UTR,intron-Proximal	5.04143	34.53180	K562	DDX3X
chr1	2326327	2326344	+	5'-UTR,intron-Distal	3.39642	4.05280	K562	CSTF2T
chr1	2325469	2325537	+	5'-UTR,intron-Distal	5.17866	7.54450	K562	EWSR1
chr1	2324620	2324681	+	5'-UTR,intron-Distal,intron-Proximal	3.12961	3.05068	HepG2	U2AF2
chr1	2326795	2326906	+	5'-UTR,intron-Distal	5.43001	13.80226	K562	FUS
chr1	2323282	2323329	+	5'-UTR	4.35318	35.15892	HepG2	DDX3X
chr1	2325807	2325879	+	5'-UTR,intron-Distal	3.53806	9.27481	K562	EWSR1
chr1	2323282	2323327	+	5'-UTR	4.34294	12.00587	K562	DDX3X
chr1	2326818	2326894	+	5'-UTR,intron-Distal	5.24244	10.03902	K562	NONO
chr1	2325830	2325866	+	5'-UTR,intron-Distal	3.14125	5.07299	K562	TAF15
chr1	2325512	2325540	+	5'-UTR,intron-Distal	3.11986	3.54602	K562	TIA1
chr1	2326068	2326143	+	5'-UTR,intron-Distal	4.33127	6.43124	K562	DGCR8
chr1	2326413	2326485	+	5'-UTR,intron-Distal	3.38749	5.17701	K562	NONO
chr1	2325852	2325956	+	5'-UTR,intron-Distal	3.06691	5.56106	HepG2	TAF15
chr1	2327168	2327222	+	5'-UTR,intron-Proximal	4.11716	10.42818	K562	SF3B4
chr1	2326308	2326443	+	5'-UTR,intron-Distal	3.85394	12.04745	K562	FUS
chr1	2324425	2324628	+	5'-UTR,intron-Distal	3.91366	12.57992	K562	SRSF1
chr1	2326933	2326976	+	5'-UTR,intron-Distal,intron-Proximal	4.38243	3.99137	K562	NONO
chr1	2323327	2323372	+	5'-UTR	4.75073	37.38516	K562	DDX3X
chr1	2326184	2326281	+	5'-UTR,intron-Distal	4.01703	8.75599	K562	FUS
chr1	2326395	2326455	+	5'-UTR,intron-Distal	3.39448	8.40080	HepG2	CSTF2T
chr1	2325866	2325936	+	5'-UTR,intron-Distal	3.75332	8.78799	K562	TAF15
chr1	2323395	2323536	+	5'-UTR,intron-Distal,intron-Proximal	3.17530	4.77469	K562	HNRNPM
chr1	2327159	2327208	+	5'-UTR,intron-Proximal	3.92914	3.27601	HepG2	RBM5
chr1	2326931	2326966	+	5'-UTR,intron-Distal,intron-Proximal	4.39643	4.42197	K562	EWSR1
chr1	2325638	2325704	+	5'-UTR,intron-Distal	5.09774	6.40665	K562	NONO
chr1	2326714	2326772	+	5'-UTR,intron-Distal	3.79748	7.39254	K562	FUS
chr1	2325818	2325888	+	5'-UTR,intron-Distal	3.44668	4.32983	K562	NONO
chr1	2326814	2326908	+	5'-UTR,intron-Distal	3.92048	13.11755	K562	CSTF2T
chr1	2326067	2326134	+	5'-UTR,intron-Distal	3.03467	4.38034	K562	ILF3
chr1	2326805	2326897	+	5'-UTR,intron-Distal	3.80271	11.65708	HepG2	CSTF2T
chr1	2327222	2327291	+	5'-UTR,CDS,intron-Proximal	3.14771	11.53192	HepG2	DDX3X
chr1	2325594	2325703	+	5'-UTR,intron-Distal	4.35137	12.22907	K562	EWSR1
chr1	2323286	2323373	+	5'-UTR	4.43611	32.83482	K562	GEMIN5
chr1	2323345	2323398	+	5'-UTR,intron-Proximal	3.72445	6.08453	K562	FTO
chr1	2325841	2325910	+	5'-UTR,intron-Distal	3.45157	7.12691	K562	DROSHA
chr1	2323329	2323402	+	5'-UTR,intron-Proximal	4.73586	80.37841	HepG2	DDX3X
chr1	2326724	2326767	+	5'-UTR,intron-Distal	4.20533	7.92474	K562	CSTF2T
chr1	2326304	2326349	+	5'-UTR,intron-Distal	3.84092	6.29987	K562	EWSR1
chr1	2325818	2325891	+	5'-UTR,intron-Distal	3.69853	11.50274	K562	CSTF2T
chr1	2325611	2325683	+	5'-UTR,intron-Distal	3.72671	6.15346	K562	FUS
chr1	2323345	2323413	+	5'-UTR,intron-Proximal	3.35217	6.14786	HepG2	NCBP2
chr1	2333543	2333629	+	CDS,intron-Distal,intron-Proximal	4.42673	4.24670	HepG2	SF3B4
chr1	2333530	2333601	+	CDS,intron-Distal,intron-Proximal	3.28615	7.12882	K562	CSTF2T
chr1	2330852	2330892	+	CDS,intron-Distal,intron-Proximal	3.13093	4.39623	HepG2	PPIG
chr1	2328554	2328679	+	CDS,intron-Proximal	3.04748	8.97576	HepG2	PPIG
chr1	2333548	2333603	+	CDS,intron-Proximal	3.88493	9.22172	HepG2	CSTF2T
chr1	2328640	2328702	+	CDS,intron-Proximal	4.19647	9.25476	HepG2	PRPF8
chr1	2333642	2333691	+	CDS,intron-Proximal	4.07513	5.28152	K562	SND1
chr1	2330853	2330901	+	CDS,intron-Distal,intron-Proximal	3.01405	7.05113	K562	DDX3X
chr1	2333148	2333189	+	intron-Distal	4.22982	10.32846	K562	ILF3
chr1	2332571	2332620	+	intron-Distal	5.26607	10.67647	K562	CSTF2T
chr1	2323579	2323658	+	intron-Distal	3.09909	8.04949	K562	FUS
chr1	2332601	2332638	+	intron-Distal	5.35702	10.88133	K562	ILF3
chr1	2333142	2333243	+	intron-Distal	5.39107	36.03690	K562	CSTF2T
chr1	2333194	2333244	+	intron-Distal	3.22703	3.59783	HepG2	HNRNPK
chr1	2325325	2325370	+	intron-Distal	3.62306	5.14628	K562	TARDBP
chr1	2333828	2333915	+	intron-Distal,intron-Proximal	4.60401	5.29549	HepG2	EFTUD2
chr1	2333189	2333242	+	intron-Distal	4.08308	4.47557	HepG2	GTF2F1
chr1	2333017	2333071	+	intron-Distal	4.42358	4.50566	HepG2	FXR2
chr1	2324288	2324354	+	intron-Distal	4.05993	4.17902	K562	SAFB
chr1	2330428	2330515	+	intron-Distal	4.05345	6.02743	K562	HNRNPM
chr1	2323573	2323716	+	intron-Distal	3.59012	8.36143	K562	XRN2
chr1	2332805	2332826	+	intron-Distal	5.68763	9.55779	HepG2	PCBP2
chr1	2333029	2333085	+	intron-Distal	5.04170	24.76337	K562	CSTF2T
chr1	2332658	2332797	+	intron-Distal	8.30490	50.71191	HepG2	PCBP2
chr1	2332805	2332884	+	intron-Distal	5.23428	10.39145	HepG2	HNRNPK
chr1	2333237	2333289	+	intron-Distal	4.50136	11.64762	K562	GTF2F1
chr1	2324444	2324511	+	intron-Distal	3.61385	7.05177	K562	MTPAP
chr1	2333176	2333237	+	intron-Distal	4.26357	12.34771	K562	GTF2F1
chr1	2332935	2333032	+	intron-Distal	6.75623	32.74176	HepG2	CSTF2T
chr1	2333455	2333497	+	intron-Distal,intron-Proximal	3.68375	4.96298	K562	GTF2F1
chr1	2325249	2325325	+	intron-Distal	4.52240	14.86134	K562	TARDBP
chr1	2324834	2324939	+	intron-Distal	3.34944	6.41594	HepG2	FUS
chr1	2333318	2333380	+	intron-Distal	3.77328	7.12934	K562	CSTF2T
chr1	2333309	2333371	+	intron-Distal	4.51370	11.28783	HepG2	CSTF2T
chr1	2324847	2324908	+	intron-Distal	3.60219	7.17328	K562	TAF15
chr1	2323580	2323744	+	intron-Distal	3.88073	24.47527	K562	GEMIN5
chr1	2323598	2323699	+	intron-Distal	4.01196	17.82880	K562	CSTF2T
chr1	2333077	2333121	+	intron-Distal	5.29713	5.63094	K562	GTF2F1
chr1	2323586	2323707	+	intron-Distal	3.25219	5.37154	HepG2	GTF2F1
chr1	2323655	2323712	+	intron-Distal	3.13874	4.55320	K562	NONO
chr1	2324895	2324977	+	intron-Distal	4.84235	18.29023	K562	FUS
chr1	2332522	2332593	+	intron-Distal	5.17941	6.99833	HepG2	GTF2F1
chr1	2324264	2324402	+	intron-Distal	3.12712	13.21588	K562	SLTM
chr1	2324419	2324495	+	intron-Distal	3.46317	7.79425	K562	TAF15
chr1	2323949	2323999	+	intron-Distal	3.18457	3.74023	K562	FUS
chr1	2324308	2324380	+	intron-Distal	4.26719	18.59033	K562	CSTF2T
chr1	2333249	2333291	+	intron-Distal	4.57154	4.42691	HepG2	GTF2F1
chr1	2333081	2333138	+	intron-Distal	4.59720	24.74624	K562	ILF3
chr1	2333857	2333902	+	intron-Distal,intron-Proximal	4.36921	3.28464	K562	EWSR1
chr1	2332696	2332815	+	intron-Distal	5.43178	13.24240	K562	PCBP1
chr1	2332995	2333021	+	intron-Distal	6.69181	31.56126	K562	ILF3
chr1	2332542	2332601	+	intron-Distal	5.05807	16.10442	K562	ILF3
chr1	2324847	2324901	+	intron-Distal	5.49275	10.76525	K562	EWSR1
chr1	2323595	2323711	+	intron-Distal	5.40952	10.71624	HepG2	DGCR8
chr1	2332980	2333018	+	intron-Distal	4.98011	9.27589	HepG2	PCBP2
chr1	2325060	2325126	+	intron-Distal	3.91430	10.72776	K562	CSTF2T
chr1	2332948	2332961	+	intron-Distal	4.86280	6.53456	HepG2	PCBP2
chr1	2325027	2325120	+	intron-Distal	4.07481	9.33807	K562	FUS
chr1	2333241	2333309	+	intron-Distal	6.43302	25.44943	HepG2	CSTF2T
chr1	2324273	2324308	+	intron-Distal	3.39900	6.62443	K562	CSTF2T
chr1	2323933	2323978	+	intron-Distal	3.77108	9.48840	K562	CSTF2T
chr1	2332561	2332631	+	intron-Distal	4.88788	13.51886	HepG2	CSTF2T
chr1	2333412	2333510	+	intron-Distal,intron-Proximal	4.98501	23.77018	K562	ILF3
chr1	2333178	2333314	+	intron-Distal	4.15520	5.47956	HepG2	ILF3
chr1	2332745	2332800	+	intron-Distal	5.28477	8.76047	HepG2	HNRNPK
chr1	2333018	2333077	+	intron-Distal	6.39468	11.88842	HepG2	PCBP2
chr1	2323560	2323724	+	intron-Distal	3.92266	11.65400	K562	DDX52
chr1	2323610	2323692	+	intron-Distal	4.09870	5.72424	HepG2	FKBP4
chr1	2323592	2323713	+	intron-Distal	3.78664	16.90861	K562	SLTM
chr1	2330988	2331057	+	intron-Distal,intron-Proximal	5.01027	8.79061	HepG2	EFTUD2
chr1	2323492	2323548	+	intron-Distal,intron-Proximal	3.44401	9.62939	K562	CSTF2T
chr1	2323639	2323714	+	intron-Distal	3.93847	15.36510	HepG2	CSTF2T
chr1	2333021	2333081	+	intron-Distal	6.55366	56.23916	K562	ILF3
chr1	2323565	2323737	+	intron-Distal	4.83169	30.87184	HepG2	PRPF4
chr1	2324417	2324468	+	intron-Distal	3.16790	7.47782	K562	CSTF2T
chr1	2323484	2323546	+	intron-Distal,intron-Proximal	3.02812	3.72881	HepG2	XRN2
chr1	2332826	2332921	+	intron-Distal	6.75600	50.97391	HepG2	PCBP2
chr1	2333243	2333318	+	intron-Distal	5.48235	25.90635	K562	CSTF2T
chr1	2332961	2333016	+	intron-Distal	4.19728	3.82414	HepG2	HNRNPK
chr1	2323478	2323560	+	intron-Distal,intron-Proximal	3.96452	8.40530	HepG2	FAM120A
chr1	2332971	2333027	+	intron-Distal	3.65679	3.33460	HepG2	ILF3
chr1	2332850	2332886	+	intron-Distal	5.88624	15.67873	K562	ILF3
chr1	2332975	2332995	+	intron-Distal	6.70386	31.08751	K562	ILF3
chr1	2323567	2323671	+	intron-Distal	3.63103	6.60675	HepG2	FASTKD2
chr1	2324693	2324738	+	intron-Distal,intron-Proximal	3.49557	5.79087	K562	FUS
chr1	2333189	2333242	+	intron-Distal	5.72098	25.11527	K562	ILF3
chr1	2332795	2332886	+	intron-Distal	3.75655	5.17241	HepG2	DDX59
chr1	2333242	2333315	+	intron-Distal	6.68439	29.55670	K562	ILF3
chr1	2332753	2332790	+	intron-Distal	4.51957	4.30178	K562	PTBP1
chr1	2323563	2323702	+	intron-Distal	5.09494	32.16534	K562	DROSHA
chr1	2324862	2324966	+	intron-Distal	3.15740	3.12015	HepG2	SAFB
chr1	2323721	2323757	+	intron-Distal	4.09694	4.13073	HepG2	GTF2F1
chr1	2333315	2333372	+	intron-Distal	4.84524	15.34645	K562	ILF3
chr1	2332923	2333026	+	intron-Distal	6.11015	39.58846	K562	CSTF2T
chr1	2323614	2323688	+	intron-Distal	5.70215	12.71374	K562	EWSR1
chr1	2334011	2334083	+	intron-Distal	3.24000	3.71694	HepG2	NKRF
chr1	2333425	2333530	+	intron-Distal,intron-Proximal	5.44181	21.20050	K562	CSTF2T
chr1	2332833	2332916	+	intron-Distal	5.24217	7.83332	HepG2	ILF3
chr1	2332743	2332797	+	intron-Distal	3.08330	3.10639	HepG2	PTBP1
chr1	2333085	2333139	+	intron-Distal	4.12417	14.35133	K562	CSTF2T
chr1	2324283	2324348	+	intron-Distal	4.44173	9.32002	K562	EWSR1
chr1	2332708	2332747	+	intron-Distal	3.69156	3.24590	HepG2	ILF3
chr1	2323568	2323716	+	intron-Distal	3.68263	15.51930	K562	AKAP8L
chr1	2332879	2332931	+	intron-Distal	4.79345	13.78704	HepG2	CSTF2T
chr1	2332499	2332542	+	intron-Distal	4.68427	13.07767	K562	ILF3
chr1	2332734	2332836	+	intron-Distal	5.98980	9.47433	HepG2	PCBP1
chr1	2328715	2328801	+	intron-Distal,intron-Proximal	3.26187	6.61270	K562	PRPF8
chr1	2332937	2333019	+	intron-Distal	4.53031	8.04402	HepG2	GTF2F1
chr1	2323613	2323699	+	intron-Distal	3.05170	4.36864	K562	MTPAP
chr1	2332827	2332946	+	intron-Distal	4.28667	13.89211	K562	PCBP1
chr1	2323584	2323712	+	intron-Distal	3.52770	14.16851	HepG2	FAM120A
chr1	2324946	2325079	+	intron-Distal	3.23390	3.53159	HepG2	DROSHA
chr1	2324820	2324895	+	intron-Distal	4.05503	13.71406	K562	FUS
chr1	2332830	2332860	+	intron-Distal	4.81931	5.41529	HepG2	CSTF2T
chr1	2324854	2324960	+	intron-Distal	3.15537	12.84606	K562	CSTF2T
chr1	2323712	2323769	+	intron-Distal	3.42110	5.41408	K562	NONO
chr1	2333099	2333130	+	intron-Distal	4.49375	5.15063	HepG2	CSTF2T
chr1	2333860	2333917	+	intron-Distal,intron-Proximal	4.75319	6.14086	K562	GTF2F1
chr1	2333170	2333241	+	intron-Distal	5.60870	26.79824	HepG2	CSTF2T
chr1	2332864	2332907	+	intron-Distal	4.61054	4.70962	HepG2	GTF2F1
chr1	2324268	2324319	+	intron-Distal	3.36977	4.67287	HepG2	TAF15
chr1	2324698	2324796	+	intron-Distal,intron-Proximal	3.48861	7.21479	K562	UCHL5
chr1	2332472	2332530	+	intron-Distal,intron-Proximal	4.87921	15.32974	HepG2	CSTF2T
chr1	2332930	2332994	+	intron-Distal	3.89437	6.58508	HepG2	DDX59
chr1	2332453	2332499	+	intron-Distal,intron-Proximal	4.72550	13.07767	K562	ILF3
chr1	2333855	2333883	+	intron-Distal,intron-Proximal	3.49375	4.45183	HepG2	CSTF2T
chr1	2333256	2333268	+	intron-Distal	4.35815	6.14899	HepG2	PCBP2
chr1	2332929	2333020	+	intron-Distal	6.49703	16.47837	K562	GTF2F1
chr1	2323471	2323565	+	intron-Distal,intron-Proximal	3.48049	7.48310	HepG2	PRPF4
chr1	2324253	2324325	+	intron-Distal	3.15053	7.19925	K562	FUS
chr1	2331015	2331130	+	intron-Distal,intron-Proximal	3.97003	3.24603	K562	KHSRP
chr1	2333032	2333088	+	intron-Distal	5.89711	16.16917	HepG2	CSTF2T
chr1	2332453	2332535	+	intron-Distal,intron-Proximal	4.26490	13.40624	K562	CSTF2T
chr1	2324883	2324927	+	intron-Distal	4.62082	5.58500	K562	UCHL5
chr1	2332922	2332975	+	intron-Distal	5.23373	30.16615	K562	ILF3
chr1	2323603	2323648	+	intron-Distal	3.94721	4.99914	K562	DDX51
chr1	2324289	2324404	+	intron-Distal	3.51806	6.02234	K562	UCHL5
chr1	2332858	2332923	+	intron-Distal	5.67872	13.68854	K562	CSTF2T
chr1	2323646	2323705	+	intron-Distal	3.55261	8.14449	K562	GTF2F1
chr1	2333020	2333077	+	intron-Distal	5.37826	13.74359	K562	GTF2F1
chr1	2332886	2332922	+	intron-Distal	5.11938	16.92518	K562	ILF3
chr1	2323488	2323543	+	intron-Distal,intron-Proximal	3.55321	3.14777	HepG2	GTF2F1
chr1	2323584	2323639	+	intron-Distal	4.33279	15.12503	HepG2	CSTF2T
chr1	2323594	2323646	+	intron-Distal	3.56037	4.50569	K562	GTF2F1
chr1	2323584	2323694	+	intron-Distal	3.89762	8.83000	HepG2	SLTM
chr1	2324853	2324947	+	intron-Distal	3.27853	11.20901	K562	SLTM
chr1	2333206	2333247	+	intron-Distal	4.85944	5.50068	HepG2	DDX59
chr1	2332884	2332919	+	intron-Distal	4.28980	4.36307	HepG2	HNRNPK
chr1	2323492	2323553	+	intron-Distal,intron-Proximal	4.07860	5.79294	K562	GTF2F1
chr1	2332864	2332929	+	intron-Distal	4.98639	4.46189	K562	GTF2F1
chr1	2323422	2323569	+	intron-Distal,intron-Proximal	3.96205	9.20539	K562	XRN2
chr1	2333017	2333068	+	intron-Distal	5.03318	5.11777	HepG2	DDX59
chr1	2332570	2332604	+	intron-Distal	3.69893	4.87041	K562	GTF2F1
chr1	2334400	2334462	+	intron-Proximal	4.16346	3.98315	HepG2	SF3B4
chr1	2332379	2332432	+	intron-Proximal	3.51595	3.76553	K562	PRPF8
chr1	2334427	2334470	+	intron-Proximal	3.88969	3.15719	K562	SMNDC1
chr1	2334430	2334459	+	intron-Proximal	4.38806	5.18111	K562	CSTF2T
chr1	2328660	2328690	+	intron-Proximal	5.06832	9.21000	K562	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RER1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RER1 is not available on ENCORE database.
44 RBPs can affect the levels of RER1.

The Knockdown/knockout RNA-Seq assay for RER1 is not available on ENCORE database.

44 RBPs can affect the gene expression of RER1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RER1	ENSG00000157916.14	1581.52980	1330.50250	0.24920	2.94240	2.31790	HepG2	ACO1
RER1	ENSG00000157916.14	576.65060	781.07730	-0.43780	3.08320	2.03490	HepG2	ADAR
RER1	ENSG00000157916.14	877.76860	1395.99040	-0.66940	7.03660	5.81060	HepG2	ASCC1
RER1	ENSG00000157916.14	2243.59610	1712.33900	0.38970	6.69410	5.69850	HepG2	AUH
RER1	ENSG00000157916.14	1287.31180	786.30230	0.71110	9.03050	8.02720	HepG2	BOP1
RER1	ENSG00000157916.14	1782.34670	1530.97360	0.21920	1.99240	1.43010	HepG2	CELF1
RER1	ENSG00000157916.14	2121.36230	1616.15730	0.39230	3.03350	2.38260	HepG2	DDX3X
RER1	ENSG00000157916.14	954.98230	779.52600	0.29280	3.16030	2.47100	HepG2	DNAJC2
RER1	ENSG00000157916.14	980.98210	780.89190	0.32900	1.98310	1.44160	HepG2	HNRNPLL
RER1	ENSG00000157916.14	1046.26940	1216.18380	-0.21710	2.21720	1.30270	HepG2	KIF1C
RER1	ENSG00000157916.14	1745.84020	1328.83450	0.39370	2.32850	1.57150	HepG2	LARP4
RER1	ENSG00000157916.14	1232.82410	903.92260	0.44760	4.27270	3.27920	HepG2	MSI2
RER1	ENSG00000157916.14	1363.14700	1632.43750	-0.26010	2.45620	1.74050	HepG2	NOL12
RER1	ENSG00000157916.14	1666.75280	1343.88410	0.31050	3.82090	3.13220	HepG2	PCBP1
RER1	ENSG00000157916.14	662.88870	890.21780	-0.42540	4.63080	3.65730	HepG2	PRPF4
RER1	ENSG00000157916.14	1122.96730	1481.02360	-0.39930	4.69430	3.91210	HepG2	QKI
RER1	ENSG00000157916.14	1998.94810	1643.22480	0.28260	3.07720	2.53890	HepG2	RBM22
RER1	ENSG00000157916.14	1264.52250	1521.83270	-0.26720	2.86060	2.31230	HepG2	NELFE
RER1	ENSG00000157916.14	927.19690	781.37260	0.24680	2.16010	1.57860	HepG2	SAFB2
RER1	ENSG00000157916.14	885.78430	640.71840	0.46720	3.45290	2.39820	HepG2	SERBP1
RER1	ENSG00000157916.14	1452.94700	860.01140	0.75650	4.36310	3.37220	HepG2	SNRNP70
RER1	ENSG00000157916.14	971.24190	754.16440	0.36490	3.02160	2.04310	HepG2	SUPT6H
RER1	ENSG00000157916.14	997.45820	1335.62690	-0.42120	5.44320	4.70180	HepG2	TAF15
RER1	ENSG00000157916.14	1029.91800	761.17250	0.43610	3.46620	2.66550	HepG2	TARDBP
RER1	ENSG00000157916.14	1100.48240	860.17060	0.35530	4.14950	3.48710	HepG2	TRIM56
RER1	ENSG00000157916.14	894.26910	644.38470	0.47270	3.49510	2.64620	HepG2	UCHL5
RER1	ENSG00000157916.14	850.47160	1085.26810	-0.35170	4.00670	3.30560	HepG2	UTP3
RER1	ENSG00000157916.14	1035.95550	878.51260	0.23770	2.26010	1.64480	HepG2	ZC3H8
RER1	ENSG00000157916.14	1605.67120	1236.28710	0.37710	6.71060	5.95570	HepG2	ZNF622
RER1	ENSG00000157916.14	2151.08040	2556.02460	-0.24880	3.05100	2.45910	K562	AGGF1
RER1	ENSG00000157916.14	4600.66480	3800.63730	0.27550	2.50280	1.93840	K562	AQR
RER1	ENSG00000157916.14	749.28670	971.51120	-0.37470	2.71410	1.67280	K562	CCAR1
RER1	ENSG00000157916.14	3333.58550	2498.62080	0.41580	8.48150	7.42150	K562	DDX47
RER1	ENSG00000157916.14	2586.36880	1921.08210	0.42890	7.21940	6.30470	K562	FXR1
RER1	ENSG00000157916.14	3012.42810	2492.61370	0.27320	2.23510	1.51680	K562	HSPD1
RER1	ENSG00000157916.14	2608.84020	2087.36580	0.32160	2.72380	1.90990	K562	PPIG
RER1	ENSG00000157916.14	5130.34940	4006.14540	0.35670	3.54340	2.62230	K562	PUF60
RER1	ENSG00000157916.14	1979.57110	2637.55450	-0.41400	4.21250	3.56390	K562	PUS1
RER1	ENSG00000157916.14	2182.68250	2569.99370	-0.23570	2.23270	1.69060	K562	RBM15
RER1	ENSG00000157916.14	1448.57610	1043.73050	0.47280	4.00210	2.77010	K562	RPS3
RER1	ENSG00000157916.14	1359.05980	1791.30590	-0.39840	3.43010	1.57440	K562	SRP68
RER1	ENSG00000157916.14	2828.16180	1947.81040	0.53790	8.41320	7.18730	K562	SRSF1
RER1	ENSG00000157916.14	1177.71550	1737.08840	-0.56070	5.08020	3.66710	K562	SUPV3L1
RER1	ENSG00000157916.14	2441.87260	1971.16460	0.30880	2.36350	1.70770	K562	TARDBP
RER1	ENSG00000157916.14	3051.92700	2433.78080	0.32640	6.03840	5.02460	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RER1 is not available on ENCORE database.

20 RBPs can affect the splicing of RER1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.13100	0.00078	0.01695	excluded	K562	SRSF1
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323278	2323397	2327222	2327310	-0.22300	0.00212	0.03833	excluded	K562	SF3B4
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.22900	0.00003	0.02161	excluded	K562	XRN2
SE	RER1	ENSG00000157916.14	chr1	+	2330853	2330953			2328554	2328659	2332295	2332374	-0.14400	0.00000	0.00000	excluded	HepG2	U2AF1
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.05700	0.00329	0.07693	excluded	K562	AKAP8L
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	0.16300	0.00082	0.06651	included	K562	XRCC6
SE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794			2323271	2323397	2327222	2327310	0.23300	0.00041	0.01268	included	HepG2	HNRNPK
SE	RER1	ENSG00000157916.14	chr1	+	2330853	2330953			2328554	2328659	2332295	2332374	-0.19300	0.00000	0.00000	excluded	HepG2	U2AF2
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.41800	0.00116	0.01603	excluded	HepG2	U2AF2
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324670			2323278	2323397	2327222	2327310	0.10300	0.00000	0.00004	included	K562	AQR
SE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794			2323271	2323397	2327222	2327310	0.17100	0.00023	0.01235	included	K562	FXR1
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.07200	0.00815	0.08995	excluded	K562	PUS1
SE	RER1	ENSG00000157916.14	chr1	+	2330926	2330953			2328554	2328659	2332295	2332374	-0.10800	0.00039	0.00771	excluded	K562	PUS1
SE	RER1	ENSG00000157916.14	chr1	+	2326085	2326167			2323281	2323397	2327222	2327310	-0.05400	0.00053	0.02631	excluded	HepG2	MATR3
SE	RER1	ENSG00000157916.14	chr1	+	2330853	2330953			2328554	2328659	2332295	2332374	-0.12500	0.00000	0.00000	excluded	K562	U2AF1
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323278	2323397	2327222	2327310	-0.23900	0.00167	0.03396	excluded	K562	U2AF1
SE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794			2323271	2323397	2327222	2327310	0.22600	0.00030	0.04786	included	K562	HNRNPM
SE	RER1	ENSG00000157916.14	chr1	+	2324670	2324794			2323271	2323397	2327222	2327310	-0.19800	0.00045	0.08004	excluded	K562	SBDS
SE	RER1	ENSG00000157916.14	chr1	+	2330853	2330953			2328554	2328659	2332295	2332374	-0.10700	0.00000	0.00000	excluded	K562	U2AF2
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323278	2323397	2327222	2327310	-0.26900	0.00613	0.08464	excluded	K562	U2AF2
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323281	2323397	2327222	2327310	-0.17400	0.00000	0.00000	excluded	K562	HNRNPU
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.06700	0.00140	0.03621	excluded	K562	AGGF1
SE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794			2323278	2323397	2327222	2327310	-0.13800	0.00000	0.00016	excluded	K562	ZC3H8
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.24800	0.00003	0.00282	excluded	HepG2	HNRNPU
SE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2323271	2323397	2327222	2327310	-0.13000	0.00002	0.04355	excluded	K562	CPEB4
A5SS	RER1	ENSG00000157916.14	chr1	+	2324646	2324794			2324646	2324670	2327222	2327310	-0.39800	0.00000	0.00000	shorter	K562	AQR
A5SS	RER1	ENSG00000157916.14	chr1	+	2324612	2324794			2324612	2324670	2327222	2327310	-0.25800	0.00005	0.00609	shorter	K562	HNRNPC
MXE	RER1	ENSG00000157916.14	chr1	+	2328554	2328659	2330853	2330953	2327222	2327310	2332295	2332374	0.13100	0.00020	0.00587	1included	HepG2	U2AF1
MXE	RER1	ENSG00000157916.14	chr1	+	2330853	2330953	2332295	2332374	2328554	2328659	2333645	2333781	-0.17700	0.00011	0.00344	2included	HepG2	U2AF1
MXE	RER1	ENSG00000157916.14	chr1	+	2324646	2324670	2324708	2324794	2323278	2323397	2327222	2327310	0.15500	0.00004	0.00048	1included	K562	AQR
MXE	RER1	ENSG00000157916.14	chr1	+	2324646	2324670	2324670	2324794	2323278	2323397	2327222	2327310	0.16300	0.00017	0.00194	1included	K562	AQR
MXE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794	2326085	2326167	2323281	2323397	2327222	2327310	-0.13300	0.00030	0.01645	2included	K562	HNRNPU
MXE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794	2326085	2326167	2323281	2323397	2327222	2327310	-0.13700	0.00031	0.01665	2included	K562	HNRNPU
MXE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794	2326085	2326167	2323271	2323397	2327222	2327310	0.23900	0.00027	0.00947	1included	HepG2	HNRNPK
MXE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794	2326085	2326167	2323271	2323397	2327222	2327310	0.28600	0.00019	0.00705	1included	HepG2	HNRNPK
MXE	RER1	ENSG00000157916.14	chr1	+	2324670	2324794	2326085	2326167	2323271	2323397	2327222	2327310	0.28400	0.00024	0.00845	1included	HepG2	HNRNPK
MXE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794	2326085	2326167	2323271	2323397	2327222	2327310	0.20600	0.00227	0.08342	1included	HepG2	DDX6
MXE	RER1	ENSG00000157916.14	chr1	+	2324708	2324794	2327046	2327087	2323281	2323397	2327222	2327310	-0.15700	0.00049	0.02390	2included	K562	AKAP8L
MXE	RER1	ENSG00000157916.14	chr1	+	2324646	2324794	2327046	2327087	2323281	2323397	2327222	2327310	-0.17500	0.00015	0.00974	2included	K562	AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RER1

General Information

Functions

Localization

Domains (AlphaFold: RER1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RER1 is not avaliable on ENCORE database.

48 proteins are bound to RER1 RNA:

eCLIP assay for RER1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RER1 is not available on ENCORE database.

44 RBPs can affect the gene expression of RER1 :

The Knockdown/knockout RNA-Seq assay for RER1 is not available on ENCORE database.

20 RBPs can affect the splicing of RER1 :

The Knockdown/knockout RNA-Seq assay for RER1 is not avaliable on ENCORE database.