PTPLAD1

General Information

Gene Name       : PTPLAD1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PTPLAD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PTPLAD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PTPLAD1 RNA is bound by 25 proteins.  







eCLIP assay for PTPLAD1 is not avaliable on ENCORE database.





25 proteins are bound to PTPLAD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr156584916365849244+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.4985911.99271HepG2G3BP1
chr156586966265869696+3'-UTR4.412175.19012HepG2LIN28B
chr156586907865869102+3'-UTR5.051727.41523K562YBX3
chr156586943365869516+3'-UTR3.490289.11553K562UPF1
chr156586983065869861+3'-UTR4.0316311.83271K562HNRNPL
chr156586916365869180+3'-UTR4.3842410.09915K562YBX3
chr156587000765870045+3'-UTR3.822903.14791K562HNRNPL
chr156586982265869830+3'-UTR3.117174.45241HepG2HNRNPL
chr156586944365869509+3'-UTR4.172495.87389HepG2UPF1
chr156586961965869704+3'-UTR5.497248.19969HepG2UPF1
chr156586893765868996+3'-UTR4.160599.65448K562YBX3
chr156587007365870163+3'-UTR4.024113.98716K562IGF2BP1
chr156586932165869367+3'-UTR5.4612010.55688K562LIN28B
chr156584724265847300+3'-UTR,5'-UTR,CDS,intron-Proximal3.694995.92869HepG2RPS3
chr156586950765869571+3'-UTR3.757354.54958K562IGF2BP2
chr156586888165868937+3'-UTR3.412754.88121HepG2YBX3
chr156587002665870120+3'-UTR4.223689.04309K562UPF1
chr156586930565869321+3'-UTR4.274838.58756K562LIN28B
chr156587030565870375+3'-UTR3.789936.15985HepG2LIN28B
chr156584721565847284+3'-UTR,5'-UTR,CDS,intron-Proximal4.199874.11693K562BUD13
chr156587029865870413+3'-UTR3.782235.16259K562LIN28B
chr156586961865869658+3'-UTR4.329125.37920K562PABPC4
chr156586912465869163+3'-UTR6.4520326.30031K562YBX3
chr156586930965869356+3'-UTR5.8374931.10132HepG2LIN28B
chr156586981965869970+3'-UTR4.9009226.18928HepG2UPF1
chr156587043865870664+3'-UTR3.310957.27374HepG2ZC3H11A
chr156586948665869558+3'-UTR3.629173.34998HepG2IGF2BP3
chr156586961965869651+3'-UTR4.685435.25389K562UPF1
chr156586910565869164+3'-UTR3.279503.13278HepG2YBX3
chr156586901065869038+3'-UTR3.510183.66308K562UPF1
chr156587008565870110+3'-UTR3.939333.66655K562YBX3
chr156586911165869124+3'-UTR6.0496920.41945K562YBX3
chr156586886465868955+3'-UTR3.948525.37876HepG2AKAP1
chr156587039465870510+3'-UTR3.6942410.16051K562UPF1
chr156584916165849245+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.551606.60490HepG2BCLAF1
chr156587060265870657+3'-UTR4.520739.81164K562FAM120A
chr156586924165869317+3'-UTR3.5394611.12108K562YBX3
chr156582302265823039+5'-UTR,CDS,intron-Proximal5.0673516.02399K562YBX3
chr156584401665844047+5'-UTR,CDS5.9741418.61923K562YBX3
chr156584401265844015+5'-UTR,CDS,intron-Proximal5.8250315.87397K562YBX3
chr156582302265823056+5'-UTR,CDS,intron-Proximal3.358934.53300K562LIN28B
chr156582282565822871+5'-UTR3.9105019.97724HepG2DDX3X
chr156582300765823057+5'-UTR,CDS,intron-Proximal3.429876.89137HepG2LIN28B
chr156582306665823195+5'-UTR,intron-Distal,intron-Proximal5.742398.88193HepG2EFTUD2
chr156582287165822910+5'-UTR4.9502241.23368HepG2DDX3X
chr156582284365822939+5'-UTR3.110175.26596K562YBX3
chr156584401165844049+5'-UTR,CDS,intron-Proximal3.339675.82148K562DDX3X
chr156582307765823102+5'-UTR,intron-Distal,intron-Proximal5.9165412.84241HepG2PRPF8
chr156582308365823102+5'-UTR,intron-Distal,intron-Proximal5.312118.03507K562AQR
chr156582293365822982+5'-UTR,CDS,intron-Proximal5.3398356.95078HepG2DDX3X
chr156584404565844099+5'-UTR,CDS,intron-Proximal3.481345.34337K562AQR
chr156582291065822933+5'-UTR5.0351841.23368HepG2DDX3X
chr156582300065823057+5'-UTR,CDS,intron-Proximal5.852757.39121HepG2RPS3
chr156582298065823022+5'-UTR,CDS,intron-Proximal3.675083.68829K562YBX3
chr156582298265823051+5'-UTR,CDS,intron-Proximal4.4138523.82117HepG2DDX3X
chr156582304465823077+5'-UTR,CDS,intron-Proximal4.1696920.06200HepG2PRPF8
chr156582283465822983+5'-UTR,CDS,intron-Proximal5.1842127.29129K562DDX3X
chr156582305565823064+5'-UTR,CDS,intron-Proximal4.206366.01372K562AQR
chr156582298365823053+5'-UTR,CDS,intron-Proximal3.8148912.59285K562DDX3X
chr156582674065826805+5'-UTR,intron-Distal,intron-Proximal4.777115.68226HepG2HNRNPM
chr156582286265822980+5'-UTR,CDS4.4490718.53538HepG2RPS3
chr156582303965823056+5'-UTR,CDS,intron-Proximal5.9615316.36710K562YBX3
chr156582293965822958+5'-UTR4.721126.09204K562YBX3
chr156582302565823044+5'-UTR,CDS,intron-Proximal3.7302613.81099HepG2PRPF8
chr156586396565863995+CDS,intron-Proximal5.205559.13109HepG2SND1
chr156586393965863993+CDS,intron-Proximal4.292856.79756K562SND1
chr156585657065856678+CDS5.837878.21474HepG2RPS3
chr156586390165863939+CDS5.0308611.14897K562SND1
chr156586251965862589+CDS,intron-Proximal4.6708711.13741K562PRPF8
chr156585101665851042+CDS,intron-Proximal3.569965.14242HepG2G3BP1
chr156586388565863965+CDS,intron-Proximal4.7446610.12887HepG2SND1
chr156585094865851114+CDS,intron-Proximal3.742396.87708HepG2EFTUD2
chr156586864065868650+CDS,intron-Proximal3.990173.24875K562SND1
chr156586243265862503+CDS3.858124.77467K562SND1
chr156586250965862576+CDS,intron-Proximal5.066603.78571K562GPKOW
chr156585662665856680+CDS4.157454.38503K562SND1
chr156585663065856774+CDS,intron-Proximal3.015145.23086K562PRPF8
chr156585104165851124+CDS,intron-Proximal3.793264.54206HepG2PRPF8
chr156585663265856739+CDS,intron-Proximal3.570287.39618HepG2PRPF8
chr156586457265864651+CDS,intron-Proximal5.8054814.57630HepG2SND1
chr156586388465863901+CDS,intron-Proximal4.864969.52210K562SND1
chr156586251765862583+CDS,intron-Proximal5.469148.77485HepG2PRPF8
chr156586253365862541+CDS4.130224.08796K562SND1
chr156586469965864823+CDS,intron-Distal,intron-Proximal4.763654.58968K562PRPF8
chr156586866465868707+CDS3.922188.63212HepG2SND1
chr156586458865864705+CDS,intron-Proximal4.406209.24069K562SND1
chr156586250665862533+CDS3.728723.95762K562SND1
chr156585105665851123+CDS,intron-Proximal3.973855.47926K562AQR
chr156585662665856680+CDS3.970846.64581K562YBX3
chr156582588065826010+intron-Distal4.830576.44072HepG2HNRNPM
chr156585110765851189+intron-Distal,intron-Proximal3.050724.07440K562PRPF8
chr156582578565825880+intron-Distal4.386094.31871HepG2HNRNPM
chr156586259065862651+intron-Distal,intron-Proximal3.635684.93376K562PRPF8
chr156585153265851585+intron-Distal4.502324.85866HepG2QKI
chr156586844765868537+intron-Distal3.763023.06150K562KHSRP
chr156582342165823486+intron-Distal4.079153.86368HepG2HNRNPM
chr156582690965826966+intron-Distal3.154403.94533K562HNRNPM
chr156582306465823083+intron-Distal,intron-Proximal5.312118.03507K562AQR
chr156582690065826961+intron-Distal3.894624.61500HepG2HNRNPM
chr156585940165859472+intron-Distal3.821844.99837HepG2XPO5
chr156585668065856730+intron-Proximal4.066315.97994K562AQR
chr156585522265855298+intron-Proximal4.784594.65563K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PTPLAD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PTPLAD1 is not available on ENCORE database.

  • 84 RBPs can affect the levels of PTPLAD1.  








The Knockdown/knockout RNA-Seq assay for PTPLAD1 is not available on ENCORE database.





84 RBPs can affect the gene expression of PTPLAD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PTPLAD1ENSG00000074696.86960.019705078.194100.4547012.2198010.95590HepG2AUH
PTPLAD1ENSG00000074696.81635.642703289.14080-1.0079014.8078012.52280HepG2BCCIP
PTPLAD1ENSG00000074696.85973.313404659.624800.358204.944403.95060HepG2CALR
PTPLAD1ENSG00000074696.83294.240703734.07290-0.180802.541001.89830HepG2CKAP4
PTPLAD1ENSG00000074696.82524.601003579.10940-0.503502.942202.15200HepG2CNOT7
PTPLAD1ENSG00000074696.82490.401803248.06030-0.383206.185604.66380HepG2YBX3
PTPLAD1ENSG00000074696.83956.035304838.02340-0.290407.030105.92790HepG2DAZAP1
PTPLAD1ENSG00000074696.82063.680803454.07420-0.7431023.2185021.37270HepG2DDX19B
PTPLAD1ENSG00000074696.82218.133403209.05570-0.532804.232203.41140HepG2DDX21
PTPLAD1ENSG00000074696.87720.381605436.232500.506005.502504.64730HepG2DDX3X
PTPLAD1ENSG00000074696.82890.908304669.64900-0.691807.962806.96610HepG2DDX6
PTPLAD1ENSG00000074696.82542.648703573.03400-0.4908011.8304010.63340HepG2DKC1
PTPLAD1ENSG00000074696.81833.364703161.12040-0.7859035.1066033.03600HepG2DNAJC2
PTPLAD1ENSG00000074696.83050.835504489.23270-0.557306.402805.52170HepG2EIF2S1
PTPLAD1ENSG00000074696.83156.406104961.21960-0.652407.173806.14440HepG2EIF4A3
PTPLAD1ENSG00000074696.83942.933304772.71500-0.275503.421602.50590HepG2EIF4G1
PTPLAD1ENSG00000074696.83503.265005830.21510-0.7348027.5160025.95200HepG2ETF1
PTPLAD1ENSG00000074696.82392.317102899.54330-0.277402.385501.65440HepG2FUBP3
PTPLAD1ENSG00000074696.83490.604705005.39080-0.520005.788304.81090HepG2FXR1
PTPLAD1ENSG00000074696.84425.524205482.27670-0.308902.150801.58270HepG2GPKOW
PTPLAD1ENSG00000074696.82132.413403220.05400-0.594608.701907.65040HepG2HNRNPA1
PTPLAD1ENSG00000074696.83470.664704446.11860-0.357307.053905.68000HepG2HNRNPA2B1
PTPLAD1ENSG00000074696.82509.015104407.17190-0.8127044.6409042.34050HepG2HNRNPL
PTPLAD1ENSG00000074696.81913.458703632.06150-0.9246022.8047020.59460HepG2HNRNPM
PTPLAD1ENSG00000074696.82957.375703557.96880-0.266704.240303.50280HepG2HNRNPU
PTPLAD1ENSG00000074696.83253.435004084.19940-0.328104.227603.34890HepG2IGF2BP1
PTPLAD1ENSG00000074696.83244.526503634.35960-0.163702.303401.62710HepG2ILF2
PTPLAD1ENSG00000074696.82958.312703414.05300-0.206702.896501.85980HepG2KIF1C
PTPLAD1ENSG00000074696.82344.853006136.62160-1.3879026.0120023.38960HepG2LARP4
PTPLAD1ENSG00000074696.81721.851403186.00080-0.8878017.3851014.65710HepG2LIN28B
PTPLAD1ENSG00000074696.84097.892104797.35590-0.227402.594101.85650HepG2NOL12
PTPLAD1ENSG00000074696.83560.702704590.00370-0.366302.958602.21440HepG2PABPC4
PTPLAD1ENSG00000074696.83896.267304795.78830-0.299703.839703.14930HepG2PCBP1
PTPLAD1ENSG00000074696.82640.141003173.43640-0.265403.094202.31820HepG2PPIL4
PTPLAD1ENSG00000074696.84149.161803682.107700.172201.965201.30530HepG2PRPF4
PTPLAD1ENSG00000074696.83427.934904879.64230-0.509408.666807.80850HepG2PTBP1
PTPLAD1ENSG00000074696.85635.864204857.644800.214302.051101.46830HepG2PUM2
PTPLAD1ENSG00000074696.83313.400703803.92430-0.199202.876402.25140HepG2PUS1
PTPLAD1ENSG00000074696.84243.718505285.30950-0.316703.272002.60080HepG2QKI
PTPLAD1ENSG00000074696.86371.502904873.029200.386707.538806.78210HepG2RBM22
PTPLAD1ENSG00000074696.84620.511305430.78250-0.233102.659302.12640HepG2NELFE
PTPLAD1ENSG00000074696.84211.599105057.65650-0.264103.151102.49880HepG2RECQL
PTPLAD1ENSG00000074696.82688.448004468.21480-0.7329014.0695012.75220HepG2RPLP0
PTPLAD1ENSG00000074696.81984.249002388.48220-0.267502.424901.84520HepG2RPS19
PTPLAD1ENSG00000074696.82490.713603374.50890-0.438104.617003.59820HepG2RPS2
PTPLAD1ENSG00000074696.82575.715603593.54820-0.480403.391602.50620HepG2RPS3A
PTPLAD1ENSG00000074696.82794.906003168.57070-0.181002.417901.80940HepG2SAFB2
PTPLAD1ENSG00000074696.83994.968005080.78880-0.346904.274203.56360HepG2SF3B4
PTPLAD1ENSG00000074696.83804.503304390.70590-0.206703.743402.94750HepG2SLBP
PTPLAD1ENSG00000074696.82704.784203695.15990-0.4501013.2019011.95810HepG2SMN1
PTPLAD1ENSG00000074696.86551.104305503.992400.251205.142504.51880HepG2SRFBP1
PTPLAD1ENSG00000074696.83553.504304074.94290-0.197502.791602.09330HepG2SRSF7
PTPLAD1ENSG00000074696.81559.252803516.16440-1.1731015.9956013.41600HepG2STAU1
PTPLAD1ENSG00000074696.84274.278203219.329100.408803.554302.80210HepG2SUPV3L1
PTPLAD1ENSG00000074696.82561.502904766.08530-0.8958020.0632018.74970HepG2TAF15
PTPLAD1ENSG00000074696.83485.285604379.92550-0.329604.037003.03320HepG2TIA1
PTPLAD1ENSG00000074696.81335.673903457.49960-1.3722054.0301052.34690HepG2TIAL1
PTPLAD1ENSG00000074696.82904.820503488.11930-0.264004.172303.50800HepG2TRIM56
PTPLAD1ENSG00000074696.86744.938503877.387200.798602.298901.41100HepG2U2AF2
PTPLAD1ENSG00000074696.81442.414301901.79790-0.398903.102802.30130HepG2UCHL5
PTPLAD1ENSG00000074696.85111.551403633.659800.4922017.4858016.05160HepG2ZC3H8
PTPLAD1ENSG00000074696.84279.594204904.83710-0.196703.659903.05470HepG2ZNF622
PTPLAD1ENSG00000074696.82791.591903479.13590-0.317603.086202.39530K562AKAP8L
PTPLAD1ENSG00000074696.81836.216902539.48580-0.467808.561806.15960K562BCCIP
PTPLAD1ENSG00000074696.83040.664403660.28020-0.267602.757301.97680K562CPSF6
PTPLAD1ENSG00000074696.85812.086304738.964800.294405.262004.40350K562DDX47
PTPLAD1ENSG00000074696.84630.240103744.094600.306404.461903.31210K562DKC1
PTPLAD1ENSG00000074696.81884.981502474.86070-0.392806.949204.99130K562EIF2S1
PTPLAD1ENSG00000074696.83047.875802448.123900.316004.462203.71870K562FXR1
PTPLAD1ENSG00000074696.83066.467402406.821500.349302.080401.47880K562G3BP2
PTPLAD1ENSG00000074696.82797.455203494.67630-0.321003.132902.29080K562GPKOW
PTPLAD1ENSG00000074696.81907.411202459.92330-0.367003.906103.21170K562HNRNPC
PTPLAD1ENSG00000074696.81613.533702196.65020-0.445105.126603.51110K562HNRNPF
PTPLAD1ENSG00000074696.83427.756604282.49520-0.321203.461602.26210K562HNRNPL
PTPLAD1ENSG00000074696.82142.392102868.01610-0.420803.161202.03940K562IGF2BP2
PTPLAD1ENSG00000074696.82314.332602917.35890-0.334103.100201.82380K562IGF2BP3
PTPLAD1ENSG00000074696.83990.898503014.662000.404605.076503.93140K562MAGOH
PTPLAD1ENSG00000074696.82675.420403411.19010-0.350503.683902.66470K562METAP2
PTPLAD1ENSG00000074696.82611.770002063.389400.339902.986402.20770K562PRPF8
PTPLAD1ENSG00000074696.81770.577302205.56100-0.316902.707901.81460K562PSIP1
PTPLAD1ENSG00000074696.82696.091203450.68510-0.356003.383502.79160K562PUS1
PTPLAD1ENSG00000074696.82161.159302737.77050-0.341202.689001.33800K562RBM34
PTPLAD1ENSG00000074696.82869.185302101.975500.448803.982002.99960K562RPS19
PTPLAD1ENSG00000074696.83382.125802473.691700.451202.302001.31930K562SAFB
PTPLAD1ENSG00000074696.83218.273202557.464200.331502.847601.37850K562SDAD1
PTPLAD1ENSG00000074696.82997.137303692.76460-0.301104.478203.46020K562SF3A3
PTPLAD1ENSG00000074696.82104.952902711.53380-0.365303.393402.20960K562SRSF5
PTPLAD1ENSG00000074696.83022.780204860.00690-0.685109.305406.93890K562STAU1
PTPLAD1ENSG00000074696.84069.347502784.564400.547207.119305.78580K562SYNCRIP
PTPLAD1ENSG00000074696.82291.016602906.00060-0.343002.889102.16660K562TARDBP
PTPLAD1ENSG00000074696.82197.993102803.13470-0.350903.974902.96850K562TIA1
PTPLAD1ENSG00000074696.81574.572202121.39130-0.430103.631302.55530K562TIAL1
PTPLAD1ENSG00000074696.82100.809302750.42830-0.388703.962102.62040K562TRA2A
PTPLAD1ENSG00000074696.84587.842503968.061800.209301.924801.31750K562UPF1
PTPLAD1ENSG00000074696.83133.410304398.84270-0.489404.715803.14100K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PTPLAD1 is not available on ENCORE database.





5 RBPs can affect the splicing of PTPLAD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPTPLAD1ENSG00000074696.8chr15+658490766584924165847224658472986585101765851069-0.071000.000010.00088excludedK562PRPF8
SEPTPLAD1ENSG00000074696.8chr15+658490766584924165847224658472986585101765851069-0.102000.000000.00009excludedHepG2U2AF1
SEPTPLAD1ENSG00000074696.8chr15+658490766584924165847224658472986585101765851069-0.086000.000000.00007excludedHepG2U2AF2
SEPTPLAD1ENSG00000074696.8chr15+658490336584924165847193658472986585101765851182-0.054000.002050.02236excludedK562AQR
SEPTPLAD1ENSG00000074696.8chr15+658490766584924165847224658472986585101765851069-0.060000.000000.00004excludedK562U2AF1
SEPTPLAD1ENSG00000074696.8chr15+658490766584924165847224658472986585101765851069-0.097000.000000.00000excludedK562U2AF2
A3SSPTPLAD1ENSG00000074696.8chr15+6586455365864704658645726586470465863830658639920.056000.000000.00000longerK562AQR
MXEPTPLAD1ENSG00000074696.8chr15+6584401365844056658472246584729865822819658230566585101765851069-0.079000.000000.000042includedHepG2U2AF1
MXEPTPLAD1ENSG00000074696.8chr15+65851017658510696585511165855222658472246584729865856552658566800.061000.001540.079381includedHepG2IGF2BP3
MXEPTPLAD1ENSG00000074696.8chr15+65851017658510696585511165855222658472246584729865856552658566800.066000.001140.010271includedK562AQR
MXEPTPLAD1ENSG00000074696.8chr15+65851017658510696585511165855222658472246584729865856552658566800.151000.000000.000001includedK562U2AF2
MXEPTPLAD1ENSG00000074696.8chr15+65851017658510696585511165855222658472246584729865856552658566800.105000.002960.019901includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PTPLAD1 is not avaliable on ENCORE database.