NFIA

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NFIA	ENSG00000162599.15	0.00	0.01	0.01	ENCSR000AEF
HepG2	NFIA	ENSG00000162599.15	6.19	7.58	6.88	ENCSR985KAT
K562	NFIA	ENSG00000162599.15	6.58	5.70	6.14	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NFIA is not avaliable on ENCORE database.

Proteins bound to RNA

NFIA RNA is bound by 43 proteins.

eCLIP assay for NFIA is not avaliable on ENCORE database.

43 proteins are bound to NFIA RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	61924165	61924258	+	3'-UTR	4.35512	3.35973	HepG2	FUBP3
chr1	61922495	61922601	+	3'-UTR	5.65969	11.15381	K562	PABPC4
chr1	61925650	61925699	+	3'-UTR	4.57683	4.40847	HepG2	PTBP1
chr1	61548338	61548427	+	5'-UTR,intron-Distal,intron-Proximal	3.59051	25.96118	K562	PTBP1
chr1	61553923	61554066	+	5'-UTR,CDS,intron-Distal	3.57793	29.35380	HepG2	BCLAF1
chr1	61553910	61553980	+	5'-UTR,CDS,intron-Distal	3.26692	12.56573	K562	ZNF622
chr1	61548229	61548304	+	5'-UTR,intron-Distal	3.19220	3.13705	K562	BUD13
chr1	61548348	61548427	+	5'-UTR,intron-Distal,intron-Proximal	3.31104	19.51973	HepG2	PCBP2
chr1	61553914	61554070	+	5'-UTR,CDS,intron-Distal	3.35726	16.16350	HepG2	GRWD1
chr1	61824816	61824870	+	CDS,intron-Distal,intron-Proximal	4.05112	6.64430	HepG2	PPIG
chr1	61553970	61554065	+	CDS,intron-Distal	3.47952	9.04951	K562	GRWD1
chr1	61554066	61554188	+	CDS,intron-Distal	3.28441	18.06679	HepG2	BCLAF1
chr1	61554075	61554151	+	CDS,intron-Distal	5.85740	12.50001	K562	RBM15
chr1	61824858	61824927	+	CDS,intron-Distal	5.06241	7.05570	HepG2	BCLAF1
chr1	61818151	61818239	+	CDS,intron-Distal	4.94476	8.74199	HepG2	GRWD1
chr1	61848854	61848940	+	CDS,intron-Distal,intron-Proximal	5.45426	7.21923	HepG2	BUD13
chr1	61824875	61824933	+	CDS,intron-Distal	3.15233	3.07653	K562	ZNF622
chr1	61554190	61554281	+	CDS,intron-Distal	3.76599	16.60646	HepG2	BCLAF1
chr1	61553980	61554059	+	CDS,intron-Distal	3.33727	11.11566	K562	ZNF622
chr1	61554058	61554193	+	CDS,intron-Distal	3.71453	6.69098	HepG2	UCHL5
chr1	61554335	61554361	+	CDS,intron-Distal,intron-Proximal	3.31416	6.50801	HepG2	BCLAF1
chr1	61553952	61554090	+	CDS,intron-Distal	3.20388	7.57476	HepG2	ZNF800
chr1	61824793	61824867	+	CDS,intron-Distal,intron-Proximal	3.11335	6.12136	HepG2	BUD13
chr1	61798184	61798251	+	CDS,intron-Distal	3.48590	4.20387	K562	ZNF622
chr1	61553963	61554073	+	CDS,intron-Distal	3.03248	12.21893	HepG2	PPIG
chr1	61743189	61743269	+	CDS,intron-Distal,intron-Proximal	3.70587	6.98305	HepG2	PPIG
chr1	61869877	61869957	+	CDS,intron-Proximal	3.46902	5.60389	HepG2	PPIG
chr1	61824925	61824979	+	CDS,intron-Distal,intron-Proximal	3.11850	3.94162	HepG2	BUD13
chr1	61553956	61554042	+	CDS,intron-Distal	4.20898	5.75613	K562	ZNF800
chr1	61869950	61870018	+	CDS,intron-Proximal	3.84233	4.52312	K562	AQR
chr1	61892172	61892232	+	CDS,intron-Distal,intron-Proximal	5.40127	8.15847	K562	PUM2
chr1	61554194	61554267	+	CDS,intron-Distal	3.62831	8.15479	HepG2	RBM15
chr1	61798220	61798269	+	CDS,intron-Distal,intron-Proximal	3.81936	4.09885	HepG2	BCLAF1
chr1	61554091	61554181	+	CDS,intron-Distal	3.27588	7.36535	K562	ZNF622
chr1	61872292	61872398	+	CDS	3.36524	4.71371	HepG2	GRWD1
chr1	61553934	61554058	+	CDS,intron-Distal	3.03218	4.26894	HepG2	UCHL5
chr1	61743188	61743225	+	CDS,intron-Distal,intron-Proximal	4.17666	5.79432	HepG2	BCLAF1
chr1	61554077	61554176	+	CDS,intron-Distal	3.78834	14.04071	HepG2	RBM15
chr1	61645793	61645919	+	intron-Distal	3.84548	4.34707	HepG2	HNRNPK
chr1	61678296	61678349	+	intron-Distal	4.15604	8.94372	HepG2	QKI
chr1	61607294	61607314	+	intron-Distal	7.23429	34.52345	HepG2	QKI
chr1	61563938	61564019	+	intron-Distal	3.16712	5.81599	HepG2	QKI
chr1	61904712	61904795	+	intron-Distal	4.10042	8.68938	HepG2	HNRNPL
chr1	61660899	61660953	+	intron-Distal	4.62486	3.30328	HepG2	SFPQ
chr1	61646920	61646973	+	intron-Distal	3.24204	5.39573	HepG2	KHSRP
chr1	61904693	61904767	+	intron-Distal	4.19264	3.57264	HepG2	GTF2F1
chr1	61595135	61595207	+	intron-Distal	4.39244	5.87146	HepG2	HNRNPC
chr1	61589169	61589245	+	intron-Distal	3.71837	4.65797	K562	TARDBP
chr1	61647690	61647721	+	intron-Distal	3.61833	4.42611	HepG2	SFPQ
chr1	61585802	61585843	+	intron-Distal	3.45001	5.14864	K562	KHSRP
chr1	61592128	61592156	+	intron-Distal	4.74228	27.67803	HepG2	HNRNPL
chr1	61608354	61608429	+	intron-Distal	4.54605	19.29076	HepG2	QKI
chr1	61585856	61585929	+	intron-Distal	3.22378	4.16795	HepG2	KHSRP
chr1	61858958	61859071	+	intron-Distal	3.72996	5.84135	HepG2	PCBP2
chr1	61696380	61696434	+	intron-Distal	3.25827	8.36674	HepG2	QKI
chr1	61683918	61683968	+	intron-Distal	3.30365	4.28669	HepG2	SFPQ
chr1	61712115	61712238	+	intron-Distal	3.86355	6.08171	HepG2	QKI
chr1	61578759	61578905	+	intron-Distal	3.10104	7.11119	K562	KHSRP
chr1	61643108	61643181	+	intron-Distal	3.74825	3.64762	HepG2	QKI
chr1	61660986	61661069	+	intron-Distal	3.45350	4.31768	HepG2	KHSRP
chr1	61592156	61592210	+	intron-Distal	3.54425	9.12799	HepG2	HNRNPL
chr1	61888458	61888542	+	intron-Distal	5.82928	13.19203	HepG2	QKI
chr1	61570835	61570876	+	intron-Distal	3.49565	3.42785	HepG2	HNRNPM
chr1	61572433	61572539	+	intron-Distal	4.05997	10.41528	HepG2	PCBP2
chr1	61696231	61696301	+	intron-Distal	4.10314	11.73278	HepG2	QKI
chr1	61585843	61585877	+	intron-Distal	3.80526	7.05443	K562	KHSRP
chr1	61592078	61592114	+	intron-Distal	4.18156	25.00325	HepG2	HNRNPL
chr1	61751068	61751186	+	intron-Distal	4.32585	4.14795	HepG2	SFPQ
chr1	61705217	61705364	+	intron-Distal	3.82572	6.89837	K562	KHSRP
chr1	61554366	61554482	+	intron-Distal,intron-Proximal	3.17888	5.02576	HepG2	TIAL1
chr1	61637379	61637453	+	intron-Distal	5.57886	12.37862	K562	TARDBP
chr1	61662586	61662695	+	intron-Distal	4.42644	11.06924	K562	TARDBP
chr1	61647862	61647907	+	intron-Distal	3.68649	14.04012	HepG2	U2AF2
chr1	61771535	61771600	+	intron-Distal	3.03660	3.45912	HepG2	HNRNPC
chr1	61857052	61857142	+	intron-Distal	3.00009	3.20655	HepG2	HNRNPL
chr1	61578937	61578992	+	intron-Distal	3.45948	4.70109	HepG2	ZC3H11A
chr1	61554396	61554454	+	intron-Distal,intron-Proximal	4.36482	8.40334	HepG2	RBM15
chr1	61788926	61789107	+	intron-Distal	4.63523	5.57507	HepG2	HNRNPL
chr1	61615434	61615555	+	intron-Distal	3.23883	11.38607	HepG2	SFPQ
chr1	61604454	61604554	+	intron-Distal	3.42954	6.60564	HepG2	ILF3
chr1	61682298	61682391	+	intron-Distal	3.05786	3.07751	K562	KHSRP
chr1	61624043	61624135	+	intron-Distal	4.28965	11.45409	HepG2	QKI
chr1	61647374	61647446	+	intron-Distal	4.83864	5.84190	HepG2	HNRNPL
chr1	61585528	61585577	+	intron-Distal	5.21066	9.18875	HepG2	KHSRP
chr1	61580028	61580058	+	intron-Distal	3.17858	6.25191	HepG2	HNRNPC
chr1	61696301	61696380	+	intron-Distal	4.68591	22.73850	HepG2	QKI
chr1	61712845	61712940	+	intron-Distal	3.88648	3.48210	HepG2	HNRNPL
chr1	61649829	61649909	+	intron-Distal	3.91860	3.05716	HepG2	PABPN1
chr1	61581707	61581784	+	intron-Distal	4.05636	3.49180	HepG2	SAFB
chr1	61827468	61827538	+	intron-Distal	3.82497	3.08314	K562	TARDBP
chr1	61599933	61600010	+	intron-Distal	3.67519	5.94848	K562	TARDBP
chr1	61776401	61776497	+	intron-Distal	5.43635	6.17200	HepG2	PCBP2
chr1	61611313	61611382	+	intron-Distal	5.51545	8.95887	HepG2	HNRNPM
chr1	61696198	61696355	+	intron-Distal	3.54217	8.03051	HepG2	PTBP1
chr1	61614006	61614121	+	intron-Distal	3.67783	16.54008	HepG2	PCBP2
chr1	61691973	61692033	+	intron-Distal	3.82232	4.23286	HepG2	QKI
chr1	61558216	61558301	+	intron-Distal	3.40552	5.88747	HepG2	HNRNPL
chr1	61610048	61610114	+	intron-Distal	3.47794	5.72132	HepG2	HNRNPM
chr1	61683968	61684020	+	intron-Distal	3.94635	8.92853	HepG2	SFPQ
chr1	61547885	61547930	+	intron-Distal	4.40298	5.32122	HepG2	NCBP2
chr1	61611270	61611313	+	intron-Distal	4.90863	6.71101	HepG2	HNRNPM
chr1	61759887	61759983	+	intron-Distal	4.33139	4.77636	HepG2	HNRNPL
chr1	61593188	61593233	+	intron-Distal	3.03177	5.34553	HepG2	QKI
chr1	61592118	61592149	+	intron-Distal	3.43036	10.84753	K562	AGGF1
chr1	61776384	61776510	+	intron-Distal	7.04222	31.29524	HepG2	PTBP1
chr1	61635217	61635267	+	intron-Distal	3.49315	3.39827	HepG2	MATR3
chr1	61577687	61577749	+	intron-Distal	3.90270	6.08725	HepG2	HNRNPL
chr1	61685706	61685898	+	intron-Distal	4.66077	10.59808	HepG2	SFPQ
chr1	61598700	61598764	+	intron-Distal	3.23815	3.01436	K562	CSTF2T
chr1	61581698	61581721	+	intron-Distal	3.09628	4.11894	HepG2	HNRNPC
chr1	61569906	61569961	+	intron-Distal	5.39462	10.04692	HepG2	HNRNPM
chr1	61611269	61611343	+	intron-Distal	3.15165	6.81051	HepG2	SFPQ
chr1	61589167	61589261	+	intron-Distal	3.21454	3.43829	K562	EXOSC5
chr1	61744026	61744131	+	intron-Distal	4.05893	4.21977	HepG2	HNRNPL
chr1	61615397	61615451	+	intron-Distal	3.99565	3.27946	HepG2	HNRNPM
chr1	61660842	61660963	+	intron-Distal	4.02396	8.75493	K562	KHSRP
chr1	61669342	61669425	+	intron-Distal	5.37017	19.08391	HepG2	HNRNPM
chr1	61636808	61636850	+	intron-Distal	3.38861	3.10946	HepG2	SFPQ
chr1	61674876	61674971	+	intron-Distal	3.43234	3.12686	HepG2	SFPQ
chr1	61571214	61571305	+	intron-Distal	3.86282	11.39965	HepG2	HNRNPM
chr1	61664274	61664378	+	intron-Distal	3.03078	3.31456	K562	TIA1
chr1	61904706	61904776	+	intron-Distal	4.10334	6.59866	K562	AGGF1
chr1	61858944	61859024	+	intron-Distal	4.10237	6.90077	HepG2	PTBP1
chr1	61615159	61615200	+	intron-Distal	4.31789	7.97776	K562	TARDBP
chr1	61647678	61647730	+	intron-Distal	5.18666	18.93094	HepG2	U2AF2
chr1	61646973	61647041	+	intron-Distal	3.60328	4.28919	HepG2	KHSRP
chr1	61643335	61643414	+	intron-Distal	3.29818	6.18146	K562	TARDBP
chr1	61585219	61585279	+	intron-Distal	4.58879	5.34107	HepG2	KHSRP
chr1	61572708	61572819	+	intron-Distal	4.09197	13.55221	HepG2	SFPQ
chr1	61578411	61578453	+	intron-Distal	4.97005	15.54659	HepG2	QKI
chr1	61589835	61589898	+	intron-Distal	3.28865	6.56460	HepG2	HNRNPM
chr1	61682308	61682395	+	intron-Distal	3.95852	3.48768	HepG2	KHSRP
chr1	61616606	61616684	+	intron-Distal	4.42593	4.69321	HepG2	GTF2F1
chr1	61722192	61722247	+	intron-Distal	3.08257	3.23179	HepG2	RBFOX2
chr1	61567835	61567892	+	intron-Distal	3.81124	3.37631	K562	HNRNPL
chr1	61692040	61692086	+	intron-Distal	4.20758	3.16986	HepG2	QKI
chr1	61612371	61612438	+	intron-Distal	4.14070	3.31570	HepG2	HNRNPK
chr1	61558530	61558617	+	intron-Distal	4.43697	4.92524	K562	TARDBP
chr1	61607314	61607349	+	intron-Distal	5.09906	23.67481	HepG2	QKI
chr1	61607226	61607294	+	intron-Distal	5.74079	42.28866	HepG2	QKI
chr1	61571869	61571937	+	intron-Distal	4.06064	3.80299	K562	HNRNPL
chr1	61643181	61643271	+	intron-Distal	3.33000	5.14637	HepG2	QKI
chr1	61572714	61572857	+	intron-Distal	3.69841	10.00830	HepG2	KHSRP
chr1	61571734	61571835	+	intron-Distal	4.31708	14.74934	K562	PTBP1
chr1	61592091	61592118	+	intron-Distal	3.59199	8.19438	K562	AGGF1
chr1	61650617	61650672	+	intron-Distal	3.25357	3.35585	HepG2	QKI
chr1	61587998	61588049	+	intron-Distal	3.38154	6.91567	HepG2	QKI
chr1	61572429	61572519	+	intron-Distal	3.04501	5.34002	HepG2	HNRNPL
chr1	61578453	61578485	+	intron-Distal	5.90729	30.59499	HepG2	QKI
chr1	61616567	61616681	+	intron-Distal	3.04437	4.51583	HepG2	HNRNPUL1
chr1	61683857	61683921	+	intron-Distal	4.07820	3.76710	K562	NONO
chr1	61785594	61785696	+	intron-Distal	3.30920	4.01234	HepG2	HNRNPL
chr1	61579179	61579221	+	intron-Distal	4.73836	4.64592	HepG2	HNRNPM
chr1	61907545	61907638	+	intron-Distal	4.31064	4.83379	HepG2	HNRNPK
chr1	61849337	61849410	+	intron-Distal	4.24771	3.69425	K562	TARDBP
chr1	61579312	61579460	+	intron-Distal	4.66000	5.71021	K562	TARDBP
chr1	61904642	61904706	+	intron-Distal	3.23486	6.53661	K562	AGGF1
chr1	61760624	61760689	+	intron-Distal	3.64337	3.42785	HepG2	HNRNPM
chr1	61571735	61571837	+	intron-Distal	3.54630	15.71974	HepG2	PTBP1
chr1	61584358	61584430	+	intron-Distal	5.90238	17.54229	K562	TARDBP
chr1	61607242	61607314	+	intron-Distal	4.30956	9.28510	K562	QKI
chr1	61616600	61616672	+	intron-Distal	4.01941	3.86417	HepG2	PRPF4
chr1	61572788	61572820	+	intron-Distal	3.35404	5.98045	K562	KHSRP
chr1	61651528	61651582	+	intron-Distal	4.28539	10.94082	HepG2	QKI
chr1	61571853	61571938	+	intron-Distal	3.57878	8.97268	HepG2	HNRNPL
chr1	61547878	61547936	+	intron-Distal	3.92337	3.25631	HepG2	PRPF4
chr1	61743044	61743143	+	intron-Distal,intron-Proximal	3.44453	3.30286	HepG2	PTBP1
chr1	61646910	61646990	+	intron-Distal	4.39656	4.79477	K562	KHSRP
chr1	61678202	61678247	+	intron-Distal	4.88509	5.20135	HepG2	QKI
chr1	61728798	61728902	+	intron-Distal	3.53141	3.42396	HepG2	U2AF2
chr1	61592110	61592217	+	intron-Distal	3.18896	6.00494	HepG2	GTF2F1
chr1	61585444	61585513	+	intron-Distal	3.20141	9.94279	HepG2	SFPQ
chr1	61618905	61618981	+	intron-Distal	3.25931	3.56114	HepG2	KHSRP
chr1	61624377	61624429	+	intron-Distal	3.07915	3.11000	HepG2	HNRNPM
chr1	61571718	61571827	+	intron-Distal	3.26675	14.58319	HepG2	HNRNPL
chr1	61662583	61662660	+	intron-Distal	3.88123	4.89657	K562	EIF4G2
chr1	61556150	61556265	+	intron-Distal	3.45910	11.43501	K562	KHSRP
chr1	61587900	61587998	+	intron-Distal	4.72921	25.52727	HepG2	QKI
chr1	61657370	61657406	+	intron-Distal	3.58646	6.58258	HepG2	PCBP2
chr1	61683921	61684003	+	intron-Distal	4.41313	4.33692	K562	NONO
chr1	61615108	61615146	+	intron-Distal	4.84716	7.52645	K562	TARDBP
chr1	61743038	61743101	+	intron-Distal,intron-Proximal	4.29162	3.35169	HepG2	U2AF2
chr1	61578078	61578157	+	intron-Distal	4.58413	5.44904	K562	TARDBP
chr1	61712026	61712115	+	intron-Distal	4.75859	9.78867	HepG2	QKI
chr1	61672221	61672302	+	intron-Distal	3.23208	4.96132	HepG2	HNRNPC
chr1	61596331	61596421	+	intron-Distal	3.39899	4.17049	K562	TARDBP
chr1	61636669	61636758	+	intron-Distal	4.50374	10.28022	K562	TARDBP
chr1	61665144	61665230	+	intron-Distal	3.00526	6.94157	HepG2	SFPQ
chr1	61592149	61592196	+	intron-Distal	3.45580	11.42969	K562	AGGF1
chr1	61567516	61567610	+	intron-Distal	4.40742	4.39969	K562	TARDBP
chr1	61584353	61584425	+	intron-Distal	3.90170	10.59710	K562	EIF4G2
chr1	61592091	61592220	+	intron-Distal	3.39245	13.42744	K562	HNRNPL
chr1	61578485	61578557	+	intron-Distal	3.91845	20.22542	HepG2	QKI
chr1	61615146	61615159	+	intron-Distal	4.22945	7.97776	K562	TARDBP
chr1	61700218	61700254	+	intron-Distal	3.86355	11.78347	HepG2	QKI
chr1	61639078	61639128	+	intron-Distal	3.98465	3.82697	HepG2	HNRNPC
chr1	61664285	61664359	+	intron-Distal	3.08364	3.14895	K562	NONO
chr1	61615822	61615904	+	intron-Distal	4.23135	9.31611	HepG2	XPO5
chr1	61598701	61598775	+	intron-Distal	5.49828	30.59266	HepG2	CSTF2
chr1	61656019	61656087	+	intron-Distal	3.84985	7.45601	HepG2	ILF3
chr1	61715000	61715077	+	intron-Distal	3.88509	6.54646	HepG2	QKI
chr1	61776387	61776498	+	intron-Distal	5.81708	11.61334	K562	PTBP1
chr1	61589775	61589828	+	intron-Distal	3.28214	6.34403	HepG2	TAF15
chr1	61700254	61700318	+	intron-Distal	3.98480	14.65807	HepG2	QKI
chr1	61913812	61913881	+	intron-Distal	3.68340	5.12778	HepG2	PCBP2
chr1	61556160	61556269	+	intron-Distal	4.15076	3.71735	K562	TIA1
chr1	61572725	61572788	+	intron-Distal	4.26668	16.88282	K562	KHSRP
chr1	61760454	61760546	+	intron-Distal	3.18490	3.11000	HepG2	HNRNPM
chr1	61657826	61657874	+	intron-Distal	4.09089	4.50495	HepG2	ILF3
chr1	61711977	61712026	+	intron-Distal	4.54605	5.20135	HepG2	QKI
chr1	61669884	61669918	+	intron-Distal	3.18238	3.18845	HepG2	HNRNPM
chr1	61783168	61783234	+	intron-Distal	3.86355	3.16986	HepG2	QKI
chr1	61599878	61599992	+	intron-Distal	5.21495	5.62492	K562	EIF4G2
chr1	61688252	61688304	+	intron-Distal	3.67284	5.09669	HepG2	QKI
chr1	61651725	61651788	+	intron-Distal	3.93497	3.27714	HepG2	HNRNPL
chr1	61655385	61655444	+	intron-Distal	3.71378	3.05155	HepG2	TAF15
chr1	61678203	61678303	+	intron-Distal	4.95325	5.86803	HepG2	SFPQ
chr1	61885821	61885884	+	intron-Distal	4.07440	8.28561	HepG2	QKI
chr1	61709911	61709972	+	intron-Distal	3.04764	4.49282	HepG2	HNRNPM
chr1	61661074	61661184	+	intron-Distal	4.25513	8.34041	K562	KHSRP
chr1	61857148	61857220	+	intron-Distal	3.94571	5.55877	HepG2	HNRNPL
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for NFIA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NFIA is not available on ENCORE database.
69 RBPs can affect the levels of NFIA.

The Knockdown/knockout RNA-Seq assay for NFIA is not available on ENCORE database.

69 RBPs can affect the gene expression of NFIA :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NFIA	ENSG00000162599.11	509.43460	367.57590	0.47080	2.89950	1.87940	HepG2	ADAR
NFIA	ENSG00000162599.11	395.09490	689.44420	-0.80320	6.23870	5.47710	HepG2	AKAP1
NFIA	ENSG00000162599.11	431.53730	578.55580	-0.42300	2.29600	1.34220	HepG2	AKAP8
NFIA	ENSG00000162599.11	435.85000	563.63430	-0.37090	2.07280	1.54950	HepG2	BOP1
NFIA	ENSG00000162599.11	348.63950	521.17280	-0.58000	2.63540	1.88990	HepG2	CNOT7
NFIA	ENSG00000162599.11	288.55460	376.95290	-0.38550	2.21350	1.30540	HepG2	YBX3
NFIA	ENSG00000162599.11	517.73210	364.93100	0.50450	3.53140	2.49060	HepG2	DDX24
NFIA	ENSG00000162599.11	151.20710	344.50220	-1.18800	8.61280	7.33080	HepG2	DDX55
NFIA	ENSG00000162599.11	353.63840	567.30840	-0.68190	4.60130	3.82230	HepG2	DDX6
NFIA	ENSG00000162599.11	780.37220	402.07400	0.95660	16.59430	15.24160	HepG2	DKC1
NFIA	ENSG00000162599.11	277.39750	366.88160	-0.40340	2.73260	2.08450	HepG2	DNAJC2
NFIA	ENSG00000162599.11	357.14110	545.39740	-0.61080	4.16660	3.44730	HepG2	EIF2S1
NFIA	ENSG00000162599.11	494.80380	352.18980	0.49040	3.43680	2.24950	HepG2	EIF3G
NFIA	ENSG00000162599.11	839.06800	602.74280	0.47710	3.10270	2.42680	HepG2	EIF4A3
NFIA	ENSG00000162599.11	416.98570	631.19280	-0.59810	3.56360	2.69740	HepG2	FIP1L1
NFIA	ENSG00000162599.11	547.42240	355.36260	0.62330	5.01280	3.96790	HepG2	FUBP3
NFIA	ENSG00000162599.11	424.11620	608.09820	-0.51980	3.34290	2.58600	HepG2	FXR1
NFIA	ENSG00000162599.11	413.69750	564.12340	-0.44740	2.46950	1.83900	HepG2	G3BP1
NFIA	ENSG00000162599.11	826.47970	586.60280	0.49450	3.31010	2.61470	HepG2	GPKOW
NFIA	ENSG00000162599.11	319.25770	482.47140	-0.59570	3.01910	1.85520	HepG2	GRSF1
NFIA	ENSG00000162599.11	564.56650	373.66270	0.59530	4.44120	3.64740	HepG2	HNRNPA1
NFIA	ENSG00000162599.11	305.33290	493.80160	-0.69350	7.13190	5.75070	HepG2	HNRNPA2B1
NFIA	ENSG00000162599.11	261.67730	451.44420	-0.78680	5.08990	3.03300	HepG2	HNRNPD
NFIA	ENSG00000162599.11	335.90300	489.51540	-0.54330	5.55990	4.63340	HepG2	HNRNPL
NFIA	ENSG00000162599.11	789.70850	559.80360	0.49630	3.61790	2.90790	HepG2	HNRNPLL
NFIA	ENSG00000162599.11	285.19000	412.89290	-0.53380	4.33740	3.59270	HepG2	HNRNPU
NFIA	ENSG00000162599.11	530.80280	706.65900	-0.41280	2.00890	1.30910	HepG2	LARP4
NFIA	ENSG00000162599.11	413.67680	611.72210	-0.56440	3.45100	2.75330	HepG2	MATR3
NFIA	ENSG00000162599.11	383.87310	532.83480	-0.47310	3.94020	3.02970	HepG2	NOL12
NFIA	ENSG00000162599.11	739.29970	496.35420	0.57470	4.55360	3.60030	HepG2	NSUN2
NFIA	ENSG00000162599.11	687.79240	490.93830	0.48630	2.39500	1.42590	HepG2	PCBP2
NFIA	ENSG00000162599.11	919.72100	471.81750	0.96290	19.83550	18.09550	HepG2	PRPF4
NFIA	ENSG00000162599.11	471.71160	604.38420	-0.35760	2.67260	2.13340	HepG2	PTBP1
NFIA	ENSG00000162599.11	428.24550	539.51000	-0.33320	2.15710	1.56190	HepG2	PUM2
NFIA	ENSG00000162599.11	624.79300	428.06390	0.54550	6.16400	5.30950	HepG2	PUS1
NFIA	ENSG00000162599.11	810.17330	654.57530	0.30760	2.17170	1.60670	HepG2	QKI
NFIA	ENSG00000162599.11	441.60020	633.45490	-0.52050	4.28020	3.24100	HepG2	RBM15
NFIA	ENSG00000162599.11	356.98850	580.07720	-0.70040	7.13980	6.39890	HepG2	RBM22
NFIA	ENSG00000162599.11	488.08350	626.45140	-0.36010	2.79790	2.17810	HepG2	RECQL
NFIA	ENSG00000162599.11	190.15040	335.89970	-0.82090	2.24510	1.68580	HepG2	RPS19
NFIA	ENSG00000162599.11	386.80700	523.42410	-0.43640	2.00250	1.32180	HepG2	RPS3A
NFIA	ENSG00000162599.11	1322.95230	706.23530	0.90540	5.69180	4.70460	HepG2	SF3A3
NFIA	ENSG00000162599.11	708.74050	554.10980	0.35500	2.11350	1.49080	HepG2	SF3B1
NFIA	ENSG00000162599.11	507.46070	629.25230	-0.31030	2.17540	1.64180	HepG2	SF3B4
NFIA	ENSG00000162599.11	335.15070	428.78100	-0.35540	2.44840	1.83810	HepG2	SMN1
NFIA	ENSG00000162599.11	519.69170	655.19490	-0.33430	2.61210	2.11980	HepG2	SRFBP1
NFIA	ENSG00000162599.11	460.63730	656.79900	-0.51180	5.08630	4.49550	HepG2	SRSF1
NFIA	ENSG00000162599.11	766.06680	568.89760	0.42920	4.82040	4.18000	HepG2	SSB
NFIA	ENSG00000162599.11	467.42910	571.10880	-0.28900	2.21370	1.64630	HepG2	SUCLG1
NFIA	ENSG00000162599.11	728.80360	590.34480	0.30390	2.13600	1.63160	HepG2	TAF15
NFIA	ENSG00000162599.11	743.81940	545.56700	0.44710	3.18690	2.41450	HepG2	TARDBP
NFIA	ENSG00000162599.11	354.41900	542.45890	-0.61410	5.36030	4.20950	HepG2	TIA1
NFIA	ENSG00000162599.11	298.37050	404.79180	-0.44010	3.24390	2.64420	HepG2	TRIM56
NFIA	ENSG00000162599.11	821.86430	539.98610	0.60590	5.18770	4.34210	HepG2	U2AF1
NFIA	ENSG00000162599.11	360.44800	525.87370	-0.54490	2.98670	2.11900	HepG2	UBE2L3
NFIA	ENSG00000162599.11	467.81700	626.32520	-0.42100	3.90040	3.09250	HepG2	UPF1
NFIA	ENSG00000162599.11	775.69200	604.68860	0.35920	3.20580	2.56950	HepG2	UTP3
NFIA	ENSG00000162599.11	551.71970	688.83440	-0.32020	2.91610	2.35880	HepG2	ZNF622
NFIA	ENSG00000162599.11	637.31750	467.74580	0.44620	3.26260	2.40880	K562	CPSF6
NFIA	ENSG00000162599.11	950.27840	650.96420	0.54570	7.33550	5.81930	K562	EIF4G2
NFIA	ENSG00000162599.11	174.69350	255.05390	-0.54600	2.64290	1.33380	K562	FUS
NFIA	ENSG00000162599.11	311.14230	505.16840	-0.69920	5.55380	4.47930	K562	GRSF1
NFIA	ENSG00000162599.11	451.46520	631.37790	-0.48390	3.38280	2.19850	K562	HNRNPL
NFIA	ENSG00000162599.11	289.15380	435.91610	-0.59220	3.90130	2.84950	K562	METAP2
NFIA	ENSG00000162599.11	630.57670	405.47200	0.63700	5.54370	4.15060	K562	PCBP2
NFIA	ENSG00000162599.11	379.66370	624.89500	-0.71890	6.77730	5.39420	K562	PPIG
NFIA	ENSG00000162599.11	195.89230	287.32020	-0.55260	2.65210	1.77030	K562	PSIP1
NFIA	ENSG00000162599.11	668.44010	442.71650	0.59430	5.97260	5.02880	K562	PTBP1
NFIA	ENSG00000162599.11	996.76670	755.38830	0.39990	3.91670	2.62720	K562	PUM1
NFIA	ENSG00000162599.11	534.14730	343.38500	0.63730	5.19000	3.70650	K562	SAFB
NFIA	ENSG00000162599.11	315.06180	433.99430	-0.46200	2.88080	2.16240	K562	SRSF1
NFIA	ENSG00000162599.11	518.70120	386.50710	0.42430	2.87770	2.04050	K562	SYNCRIP
NFIA	ENSG00000162599.11	485.37030	356.73670	0.44410	3.11880	2.26630	K562	U2AF2
NFIA	ENSG00000162599.11	213.22720	332.36550	-0.64040	3.52430	2.36790	K562	UCHL5
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NFIA is not available on ENCORE database.

8 RBPs can affect the splicing of NFIA :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NFIA	ENSG00000162599.11	chr1	+	61892136	61892228			61872233	61872399	61920974	61921196	-0.45300	0.00155	0.01762	excluded	K562	AQR
SE	NFIA	ENSG00000162599.11	chr1	+	61851542	61851596			61848908	61849037	61869775	61869939	0.20800	0.00068	0.03420	included	HepG2	SFPQ
SE	NFIA	ENSG00000162599.11	chr1	+	61892136	61892228			61872233	61872399	61920974	61928465	-0.69300	0.00038	0.01024	excluded	K562	U2AF1
SE	NFIA	ENSG00000162599.11	chr1	+	61851542	61851596			61848908	61849037	61869775	61869939	0.15300	0.00002	0.00500	included	HepG2	LARP4
SE	NFIA	ENSG00000162599.11	chr1	+	61892136	61892228			61872233	61872399	61920974	61921196	-0.21800	0.00029	0.01136	excluded	HepG2	SF3A3
SE	NFIA	ENSG00000162599.11	chr1	+	61865047	61865192			61848908	61849037	61869775	61869954	-0.21700	0.00053	0.02463	excluded	K562	PTBP1
MXE	NFIA	ENSG00000162599.11	chr1	+	61818121	61818239	61824818	61824946	61798183	61798258	61848908	61849037	-0.40000	0.00012	0.00134	2included	HepG2	U2AF2
MXE	NFIA	ENSG00000162599.11	chr1	+	61824818	61824946	61848908	61849037	61818121	61818239	61869775	61869954	-0.24700	0.00446	0.02776	2included	HepG2	U2AF2
MXE	NFIA	ENSG00000162599.11	chr1	+	61818121	61818239	61824818	61824946	61798183	61798258	61848908	61849037	-0.32600	0.00318	0.07616	2included	HepG2	RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NFIA

General Information

Functions

Localization

Domains (AlphaFold: NFIA)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NFIA is not avaliable on ENCORE database.

43 proteins are bound to NFIA RNA:

eCLIP assay for NFIA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NFIA is not available on ENCORE database.

69 RBPs can affect the gene expression of NFIA :

The Knockdown/knockout RNA-Seq assay for NFIA is not available on ENCORE database.

8 RBPs can affect the splicing of NFIA :

The Knockdown/knockout RNA-Seq assay for NFIA is not avaliable on ENCORE database.