MYO1B

General Information

Gene Name       : MYO1B
Gene ID             : ENSG00000128641.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MYO1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MYO1BENSG00000128641.182.661.882.27ENCSR000AEF
HepG2MYO1BENSG00000128641.1842.9974.5058.75ENCSR985KAT
K562MYO1BENSG00000128641.180.040.010.03ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MYO1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • MYO1B RNA is bound by 21 proteins.  







eCLIP assay for MYO1B is not avaliable on ENCORE database.





21 proteins are bound to MYO1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2192289786192289877+3'-UTR3.947465.70786HepG2ZC3H11A
chr2192280995192281063+3'-UTR,CDS,intron-Proximal5.187853.77802HepG2U2AF2
chr2192111007192111109+5'-UTR,intron-Distal,intron-Proximal4.558924.86316HepG2FAM120A
chr2192110160192110245+5'-UTR,intron-Distal3.564045.44438HepG2DDX3X
chr2192257804192257935+5'-UTR,CDS3.754053.57110HepG2UCHL5
chr2192257781192257887+5'-UTR,CDS,intron-Proximal3.108544.20336HepG2AQR
chr2192110245192110323+5'-UTR,intron-Distal3.8819215.91425HepG2DDX3X
chr2192210986192211007+CDS4.761624.78529HepG2BCLAF1
chr2192194659192194712+CDS,intron-Proximal3.109796.64701HepG2BCLAF1
chr2192194746192194757+CDS,intron-Proximal3.483994.02291HepG2GRWD1
chr2192206186192206188+CDS,intron-Proximal4.491343.06595HepG2BCLAF1
chr2192265086192265141+CDS,intron-Proximal3.727573.16095HepG2U2AF2
chr2192141684192141752+CDS4.509338.15024HepG2BCLAF1
chr2192250609192250669+CDS,intron-Proximal3.438449.57541HepG2BCLAF1
chr2192248019192248057+CDS4.111823.79347HepG2GRWD1
chr2192228495192228598+CDS4.1301111.21209HepG2BCLAF1
chr2192250773192250810+CDS3.341534.24070HepG2GRWD1
chr2192226997192227090+CDS3.130647.65887HepG2GRWD1
chr2192227066192227098+CDS,intron-Proximal4.616745.52963HepG2PPIG
chr2192194660192194716+CDS,intron-Proximal3.802978.07380HepG2GRWD1
chr2192210961192210986+CDS,intron-Proximal4.092408.94445HepG2BCLAF1
chr2192278820192278864+CDS4.153765.79432HepG2BCLAF1
chr2192265185192265232+CDS,intron-Proximal3.784526.12954HepG2PRPF8
chr2192257915192257952+CDS,intron-Proximal3.818789.93259HepG2BCLAF1
chr2192252025192252158+CDS3.545156.30471HepG2G3BP1
chr2192246217192246293+CDS,intron-Proximal4.054109.39582HepG2BCLAF1
chr2192278822192278908+CDS,intron-Proximal3.800016.15459HepG2GRWD1
chr2192206241192206292+CDS,intron-Proximal4.4929613.19442HepG2BCLAF1
chr2192257924192257978+CDS,intron-Proximal3.572518.78144HepG2PRPF8
chr2192228505192228563+CDS3.215673.47314HepG2G3BP1
chr2192250675192250772+CDS3.011234.44431HepG2G3BP1
chr2192141660192141755+CDS4.2064612.49287HepG2GRWD1
chr2192278775192278802+CDS3.419023.94979HepG2BCLAF1
chr2192275791192275798+CDS,intron-Proximal4.533784.04372HepG2BCLAF1
chr2192160928192160953+CDS,intron-Proximal3.008124.29277HepG2GRWD1
chr2192227068192227098+CDS,intron-Proximal3.865157.65975HepG2BCLAF1
chr2192141691192141753+CDS3.660687.55042HepG2PPIG
chr2192248006192248071+CDS,intron-Proximal3.492969.84433HepG2BCLAF1
chr2192246231192246290+CDS4.160453.96931HepG2G3BP1
chr2192275884192275898+CDS4.881366.04243HepG2BCLAF1
chr2192265107192265177+CDS,intron-Proximal4.261633.68241HepG2G3BP1
chr2192250683192250773+CDS3.315288.80587HepG2GRWD1
chr2192273865192273904+CDS5.030345.70640HepG2BCLAF1
chr2192228453192228473+CDS,intron-Proximal4.107205.36555HepG2BCLAF1
chr2192225437192225500+CDS,intron-Proximal3.823764.16174HepG2PRPF8
chr2192228953192229035+CDS,intron-Proximal3.442066.25527HepG2PRPF8
chr2192194712192194756+CDS,intron-Proximal3.899056.97808HepG2BCLAF1
chr2192228453192228528+CDS,intron-Proximal3.049136.34055HepG2PPIG
chr2192214921192214985+CDS,intron-Proximal5.560397.36776HepG2PRPF8
chr2192175960192176019+intron-Distal4.330004.30850HepG2QKI
chr2192164569192164698+intron-Distal3.531774.33990HepG2QKI
chr2192237906192237995+intron-Distal4.168153.58660HepG2ILF3
chr2192267522192267601+intron-Distal,intron-Proximal4.496793.85055HepG2XPO5
chr2192110799192110881+intron-Distal3.481514.72468HepG2FAM120A
chr2192133522192133673+intron-Distal4.093613.60235HepG2HNRNPM
chr2192267483192267580+intron-Distal,intron-Proximal3.330003.35377HepG2QKI
chr2192254257192254341+intron-Distal4.531285.01842HepG2PRPF8
chr2192269941192270087+intron-Distal4.631459.30950HepG2SUGP2
chr2192174149192174204+intron-Distal3.373543.59523HepG2SUGP2
chr2192198361192198478+intron-Distal3.819545.36899HepG2PTBP1
chr2192173625192173697+intron-Distal3.403764.57452HepG2SUGP2
chr2192110368192110432+intron-Distal,intron-Proximal3.788303.10582HepG2TIAL1
chr2192173998192174091+intron-Distal4.930987.09509HepG2SUGP2
chr2192110782192110871+intron-Distal3.083524.07062HepG2CSTF2T
chr2192236368192236475+intron-Distal3.487166.18258HepG2U2AF2
chr2192110782192110926+intron-Distal4.049103.26022HepG2PRPF4
chr2192236475192236528+intron-Distal4.444053.35169HepG2U2AF2
chr2192111945192111998+intron-Distal3.897453.07980HepG2HNRNPM
chr2192174342192174424+intron-Distal3.574274.57452HepG2SUGP2
chr2192121384192121488+intron-Distal4.126283.80778HepG2QKI
chr2192261017192261082+intron-Distal,intron-Proximal4.955416.39049HepG2U2AF2
chr2192225467192225543+intron-Proximal4.700886.18899HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MYO1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MYO1B is not available on ENCORE database.

  • 79 RBPs can affect the levels of MYO1B.  








The Knockdown/knockout RNA-Seq assay for MYO1B is not available on ENCORE database.





79 RBPs can affect the gene expression of MYO1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MYO1BENSG00000128641.132690.402003768.53520-0.486204.496703.31760HepG2ABCF1
MYO1BENSG00000128641.132182.103903115.29440-0.513603.961202.83890HepG2BCCIP
MYO1BENSG00000128641.132466.000503133.74730-0.345707.726906.72170HepG2CKAP4
MYO1BENSG00000128641.131453.877601924.59470-0.404603.337302.16530HepG2CSTF2
MYO1BENSG00000128641.133539.780904437.10120-0.326008.308507.12900HepG2DAZAP1
MYO1BENSG00000128641.132141.707102861.21420-0.417904.755703.89300HepG2DDX21
MYO1BENSG00000128641.132566.213902998.73810-0.224702.797202.11650HepG2DKC1
MYO1BENSG00000128641.132416.803503146.63070-0.380709.436308.31770HepG2DNAJC2
MYO1BENSG00000128641.131653.316502552.66740-0.626607.197706.27440HepG2EIF2S1
MYO1BENSG00000128641.131530.480702820.95640-0.8822011.5667010.28690HepG2EIF4A3
MYO1BENSG00000128641.136318.026802746.675401.2017013.7199012.25420HepG2EIF4B
MYO1BENSG00000128641.133383.809904193.13410-0.309402.760501.94680HepG2EIF4G2
MYO1BENSG00000128641.134026.799404576.09700-0.184502.055801.52130HepG2ETF1
MYO1BENSG00000128641.133854.897403062.888900.331702.623401.80940HepG2EWSR1
MYO1BENSG00000128641.132324.519803733.68150-0.683702.963701.91050HepG2FTO
MYO1BENSG00000128641.132640.775601847.793900.515107.072105.85070HepG2FUBP3
MYO1BENSG00000128641.132271.569903039.49530-0.420103.386102.25380HepG2GNB2L1
MYO1BENSG00000128641.132261.139603205.25250-0.503406.958506.00260HepG2HNRNPA1
MYO1BENSG00000128641.132238.523103565.19330-0.6714011.317009.99390HepG2HNRNPC
MYO1BENSG00000128641.132603.819604017.14240-0.6255018.4542016.81370HepG2HNRNPF
MYO1BENSG00000128641.133110.635404041.95220-0.3778010.927009.66570HepG2HNRNPL
MYO1BENSG00000128641.132141.791603541.62670-0.7256025.6914024.00000HepG2HNRNPU
MYO1BENSG00000128641.132502.937403955.75360-0.6603013.5381012.06200HepG2IGF2BP1
MYO1BENSG00000128641.133929.277902683.827300.549906.224405.24910HepG2IGF2BP2
MYO1BENSG00000128641.132955.456903617.66420-0.291706.697105.60650HepG2ILF2
MYO1BENSG00000128641.132455.292002865.23530-0.222803.544802.39020HepG2KIF1C
MYO1BENSG00000128641.134781.599006201.34300-0.375102.507701.71880HepG2LARP4
MYO1BENSG00000128641.132193.760002847.34540-0.376202.979102.29980HepG2MAGOH
MYO1BENSG00000128641.134154.229102863.261400.536805.173004.33530HepG2MATR3
MYO1BENSG00000128641.132569.629904112.26570-0.678405.490304.09750HepG2MTPAP
MYO1BENSG00000128641.132845.271504399.80410-0.6289014.8502013.14880HepG2NOL12
MYO1BENSG00000128641.133024.468903505.67590-0.213002.730101.88740HepG2PARN
MYO1BENSG00000128641.132547.946203158.85800-0.310104.229903.33880HepG2PPIL4
MYO1BENSG00000128641.132880.968902363.351300.285602.312401.57070HepG2PRPF8
MYO1BENSG00000128641.133906.951102641.876900.5644015.7255014.62550HepG2PTBP1
MYO1BENSG00000128641.133533.119104199.91330-0.249402.295901.74590HepG2PUF60
MYO1BENSG00000128641.135669.475004455.099300.347704.726903.86210HepG2PUM2
MYO1BENSG00000128641.136237.170503375.318100.885807.250206.13760HepG2RAVER1
MYO1BENSG00000128641.137692.306503824.797601.0079045.4630043.85260HepG2RBM22
MYO1BENSG00000128641.132769.462703590.21190-0.374503.031101.99270HepG2RBM27
MYO1BENSG00000128641.133455.419002940.117700.232903.177702.60580HepG2NELFE
MYO1BENSG00000128641.133107.041002738.388200.182102.121901.57300HepG2RECQL
MYO1BENSG00000128641.132996.964704327.21940-0.529907.421506.38360HepG2RPLP0
MYO1BENSG00000128641.131714.178103314.73130-0.951409.561607.91260HepG2RPS10
MYO1BENSG00000128641.133011.020502337.901800.364902.999002.18460HepG2RRP9
MYO1BENSG00000128641.132182.255303154.00900-0.5314015.6677014.32130HepG2SAFB2
MYO1BENSG00000128641.136064.736603981.826500.606904.926204.01040HepG2SF3A3
MYO1BENSG00000128641.133503.274002750.453700.348906.530305.68420HepG2SF3B4
MYO1BENSG00000128641.133559.795204026.85820-0.177902.832202.12210HepG2SLBP
MYO1BENSG00000128641.134136.744603678.164500.169402.675902.04030HepG2SMN1
MYO1BENSG00000128641.135761.499004440.823600.375501.979401.32350HepG2SNRNP70
MYO1BENSG00000128641.136234.126404320.016300.5291018.9686017.96430HepG2SRFBP1
MYO1BENSG00000128641.135377.570702870.911300.9053046.5869045.16080HepG2SRSF1
MYO1BENSG00000128641.132616.831404146.68350-0.6641022.5393020.99170HepG2SRSF5
MYO1BENSG00000128641.132683.313103946.65720-0.5566015.1193013.71760HepG2SRSF7
MYO1BENSG00000128641.132845.770802335.667800.284904.595703.91720HepG2SRSF9
MYO1BENSG00000128641.133168.462003750.88110-0.243403.653403.08200HepG2SSB
MYO1BENSG00000128641.131485.863702023.33060-0.445402.956701.81610HepG2STIP1
MYO1BENSG00000128641.135430.870304716.023500.203503.234802.57310HepG2SUCLG1
MYO1BENSG00000128641.133828.981803049.214300.328402.665301.99990HepG2SUPV3L1
MYO1BENSG00000128641.133042.488102580.578900.237502.611402.06540HepG2TAF15
MYO1BENSG00000128641.132728.598703930.07380-0.526406.813005.74320HepG2TARDBP
MYO1BENSG00000128641.131949.675003441.56750-0.8198021.2282020.08390HepG2TIAL1
MYO1BENSG00000128641.132819.264903472.10130-0.300505.148404.42740HepG2TRIM56
MYO1BENSG00000128641.133249.131804102.97520-0.336604.032302.95300HepG2TUFM
MYO1BENSG00000128641.133918.467603255.649700.267201.914101.38100HepG2U2AF1
MYO1BENSG00000128641.133339.992204342.82790-0.378803.211702.31000HepG2UBE2L3
MYO1BENSG00000128641.131067.431101801.38220-0.755009.195907.81290HepG2UCHL5
MYO1BENSG00000128641.132873.159803531.27160-0.297505.375404.45250HepG2UPF1
MYO1BENSG00000128641.132036.943602792.59950-0.455202.341001.42390HepG2UPF2
MYO1BENSG00000128641.133086.579103629.65120-0.233803.000001.91480HepG2UTP18
MYO1BENSG00000128641.134315.068703409.303600.339807.271406.37710HepG2UTP3
MYO1BENSG00000128641.131932.112203001.61190-0.635607.100505.95100HepG2XRN2
MYO1BENSG00000128641.133546.272602775.116400.353708.231707.17680HepG2ZC3H8
MYO1BENSG00000128641.134299.280603883.722400.146602.148301.64870HepG2ZNF622
MYO1BENSG00000128641.131.0491012.26670-3.547502.436401.67610K562MTPAP
MYO1BENSG00000128641.132.2785013.63100-2.580802.007301.35950K562NSUN2
MYO1BENSG00000128641.1317.935800.0000099999.999904.615703.64810K562PRPF8
MYO1BENSG00000128641.131.5025013.44790-3.161902.600901.80960K562SF3A3
MYO1BENSG00000128641.131.3779013.77750-3.321702.634501.71760K562SRPK2
MYO1BENSG00000128641.130.7806014.45310-4.210603.399702.60900K562UPF1
MYO1BENSG00000128641.130.0000012.36730-99999.999993.824502.79090K562WDR3
MYO1BENSG00000128641.130.4814012.85910-4.739503.401302.47250K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MYO1B is not available on ENCORE database.





16 RBPs can affect the splicing of MYO1B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMYO1BENSG00000128641.13chr2+1922654741922655611922651071922651941922728401922729150.241000.000150.02015includedHepG2G3BP1
SEMYO1BENSG00000128641.13chr2+1922673571922674441922651071922651941922728401922729150.210000.000000.00051includedHepG2RBM22
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192272840192272915-0.459000.000000.00000excludedHepG2U2AF1
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.076000.005330.05580excludedHepG2U2AF2
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.164000.001320.08392excludedHepG2DDX3X
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.183000.000890.05182excludedHepG2NCBP2
SEMYO1BENSG00000128641.13chr2+1922654741922655611922651071922651941922673571922674440.061000.000480.02624includedHepG2SFPQ
SEMYO1BENSG00000128641.13chr2+1922673571922674441922651071922651941922728401922729150.453000.000000.00000includedHepG2PTBP1
SEMYO1BENSG00000128641.13chr2+1922654741922655611922651071922651941922728401922729150.439000.000000.00000includedHepG2MATR3
SEMYO1BENSG00000128641.13chr2+192267357192267444192265107192265194192272840192272915-0.214000.000940.07176excludedHepG2DDX6
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.475000.000000.00000excludedHepG2SRSF1
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.138000.000060.00310excludedHepG2SF3A3
SEMYO1BENSG00000128641.13chr2+1922654741922655611922651071922651941922673571922674440.060000.001140.09797includedHepG2RBFOX2
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.257000.000020.00186excludedHepG2PCBP1
SEMYO1BENSG00000128641.13chr2+192265474192265561192265107192265194192267357192267444-0.189000.000150.00845excludedHepG2HNRNPC
MXEMYO1BENSG00000128641.13chr2+192265474192265561192267357192267444192265107192265194192272840192272915-0.302000.000000.000082includedHepG2SRSF1
MXEMYO1BENSG00000128641.13chr2+192265474192265561192267357192267444192265107192265194192272840192272915-0.149000.000260.013642includedHepG2SF3A3
MXEMYO1BENSG00000128641.13chr2+1922654741922655611922673571922674441922651071922651941922728401922729150.176000.003520.068421includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MYO1B is not avaliable on ENCORE database.