MRPL20

General Information

Gene Name       : MRPL20
Gene ID             : ENSG00000242485.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MRPL20)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MRPL20ENSG00000242485.572.3187.6479.97ENCSR000AEF
HepG2MRPL20ENSG00000242485.5100.3786.5593.46ENCSR985KAT
K562MRPL20ENSG00000242485.5191.04120.74155.89ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MRPL20 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MRPL20 RNA is bound by 15 proteins.  







eCLIP assay for MRPL20 is not avaliable on ENCORE database.





15 proteins are bound to MRPL20 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr113375911337647-3'-UTR,CDS,intron-Distal3.6181210.41546K562BUD13
chr113374221337486-3'-UTR,CDS,intron-Distal,intron-Proximal3.825425.75263HepG2LARP4
chr113374141337439-3'-UTR,intron-Distal5.3540525.62260K562PABPC4
chr113375961337645-3'-UTR,CDS,intron-Distal3.062475.70281HepG2U2AF2
chr113373981337414-3'-UTR,intron-Distal5.6276940.02482K562PABPC4
chr113373241337394-3'-UTR,intron-Distal3.6717513.25597K562PABPC4
chr113375941337684-3'-UTR,CDS,intron-Distal3.518944.34573HepG2SF3B4
chr113425961342663-5'-UTR,CDS,intron-Distal,intron-Proximal3.021969.01216K562DDX3X
chr113425481342657-5'-UTR,CDS,intron-Distal,intron-Proximal5.120144.66990HepG2DDX3X
chr113425431342577-CDS,intron-Distal3.378139.92071K562DDX3X
chr113411051341157-CDS,intron-Distal,intron-Proximal3.754724.81289HepG2RBM22
chr113411861341263-CDS,intron-Distal,intron-Proximal3.539115.56491HepG2BCLAF1
chr113422431342292-CDS,intron-Distal,intron-Proximal5.3701522.69586K562AQR
chr113425091342514-CDS,intron-Distal3.9799411.22180K562DDX3X
chr113422431342308-CDS,intron-Distal,intron-Proximal3.192765.54603K562PRPF8
chr113422331342398-CDS,intron-Distal,intron-Proximal3.182599.85767HepG2GRWD1
chr113411291341238-CDS,intron-Distal,intron-Proximal3.955878.47339HepG2PRPF8
chr113425141342543-CDS,intron-Distal3.6628215.74880K562DDX3X
chr113423831342400-CDS,intron-Distal,intron-Proximal3.2944810.59917K562DDX3X
chr113422861342363-CDS,intron-Distal,intron-Proximal3.498584.47973K562YBX3
chr113422431342292-CDS,intron-Distal,intron-Proximal3.253798.75624HepG2PRPF8
chr113421071342154-intron-Distal3.480144.24159K562RBM15
chr113419341342027-intron-Distal5.2491510.39145HepG2HNRNPK
chr113420271342116-intron-Distal3.984218.56237HepG2HNRNPK
chr113417891341837-intron-Distal3.456114.22460K562RBM15
chr113420341342096-intron-Distal4.065293.34601K562HNRNPK
chr113417261341740-intron-Distal,intron-Proximal3.5781910.58922HepG2HNRNPC
chr113419091342034-intron-Distal4.664834.47904K562HNRNPK
chr113416871341726-intron-Distal,intron-Proximal3.318677.81890HepG2HNRNPC
chr113421861342236-intron-Distal,intron-Proximal4.642109.72826K562RBM15
chr113424541342508-intron-Distal,intron-Proximal4.101963.56873HepG2PRPF8
chr113421921342236-intron-Distal,intron-Proximal3.986075.26367K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MRPL20 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MRPL20 is not available on ENCORE database.

  • 75 RBPs can affect the levels of MRPL20.  








The Knockdown/knockout RNA-Seq assay for MRPL20 is not available on ENCORE database.





75 RBPs can affect the gene expression of MRPL20 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MRPL20ENSG00000242485.11109.69330682.065700.702105.928605.18400HepG2AKAP1
MRPL20ENSG00000242485.1646.81200861.15010-0.412904.479103.64130HepG2AUH
MRPL20ENSG00000242485.1749.58140510.947100.552803.301902.27930HepG2BCCIP
MRPL20ENSG00000242485.1805.14030550.027500.549604.741203.98420HepG2BOP1
MRPL20ENSG00000242485.1647.19140518.656100.319302.720602.05970HepG2CKAP4
MRPL20ENSG00000242485.1457.93370268.109100.772204.067703.13330HepG2CNOT7
MRPL20ENSG00000242485.1388.55370561.30800-0.530702.962302.32540HepG2DDX6
MRPL20ENSG00000242485.1589.24720359.525000.712705.320604.07850HepG2EEF2
MRPL20ENSG00000242485.1416.81650299.674200.475902.511101.45390HepG2EFTUD2
MRPL20ENSG00000242485.1803.47450596.191400.430402.487601.88000HepG2EIF4A3
MRPL20ENSG00000242485.1538.71170322.640500.739506.146005.14340HepG2HNRNPC
MRPL20ENSG00000242485.1384.09850255.427500.588503.054001.78750HepG2KHDRBS1
MRPL20ENSG00000242485.1986.75520605.210700.705206.038305.13250HepG2MATR3
MRPL20ENSG00000242485.1360.12290551.58940-0.615104.232203.35120HepG2PABPC4
MRPL20ENSG00000242485.1439.69280317.230000.470903.529802.58450HepG2PARN
MRPL20ENSG00000242485.1723.85720539.342100.424404.063303.35440HepG2PCBP1
MRPL20ENSG00000242485.1359.22950539.42690-0.586504.798403.93280HepG2RBM25
MRPL20ENSG00000242485.1800.93160459.929500.800207.431105.79190HepG2RBM27
MRPL20ENSG00000242485.1749.05360610.757200.294402.099401.61470HepG2NELFE
MRPL20ENSG00000242485.1413.37940283.988200.541503.356002.68720HepG2RPS19
MRPL20ENSG00000242485.1598.24750424.145800.496102.825002.01640HepG2RPS2
MRPL20ENSG00000242485.1510.14600269.181200.922206.705705.46860HepG2RPS3A
MRPL20ENSG00000242485.1675.19610432.994300.640904.697403.28100HepG2RPS5
MRPL20ENSG00000242485.1402.48500253.482200.667003.809302.28110HepG2SART3
MRPL20ENSG00000242485.1959.41720621.948700.625304.621903.73740HepG2SF3A3
MRPL20ENSG00000242485.1771.78300571.386500.433604.120703.42230HepG2SF3B4
MRPL20ENSG00000242485.1489.36940332.831700.556005.462704.61040HepG2SMN1
MRPL20ENSG00000242485.1808.82460596.390100.439504.444303.87980HepG2SRSF1
MRPL20ENSG00000242485.1992.28250810.384100.292002.855302.33640HepG2SSB
MRPL20ENSG00000242485.1962.17720805.842800.255702.534601.93460HepG2SUCLG1
MRPL20ENSG00000242485.1511.43730311.382200.715806.892506.16840HepG2TIAL1
MRPL20ENSG00000242485.1915.90530701.150600.385403.298302.33740HepG2TUFM
MRPL20ENSG00000242485.1357.61130241.104000.568602.742901.65320HepG2XPO5
MRPL20ENSG00000242485.1679.33370492.287800.464502.661301.95090HepG2XRN2
MRPL20ENSG00000242485.1503.71360408.381900.302602.119701.51990HepG2ZC3H8
MRPL20ENSG00000242485.11145.52620892.466000.360002.778601.59630K562AARS
MRPL20ENSG00000242485.13197.435702329.492800.456805.800503.90290K562APOBEC3C
MRPL20ENSG00000242485.11028.155801301.30660-0.339903.005901.43300K562CEBPZ
MRPL20ENSG00000242485.1688.724101017.74850-0.563406.266605.08940K562CPSF6
MRPL20ENSG00000242485.11310.092101061.518700.303403.119701.70520K562DDX27
MRPL20ENSG00000242485.12861.985901929.740000.5685014.2565012.89410K562DDX47
MRPL20ENSG00000242485.11275.93950759.057600.749207.437006.14040K562EIF3G
MRPL20ENSG00000242485.11023.792001529.53110-0.579204.139902.09430K562ESF1
MRPL20ENSG00000242485.1577.76230812.06140-0.491104.216702.20690K562FASTKD2
MRPL20ENSG00000242485.1689.616701035.47440-0.586405.718204.47980K562FMR1
MRPL20ENSG00000242485.1682.79590877.63170-0.362202.294101.46600K562FTO
MRPL20ENSG00000242485.11926.96730827.653301.2191041.2130039.02990K562FXR1
MRPL20ENSG00000242485.1356.40500573.50850-0.686304.466703.52470K562G3BP2
MRPL20ENSG00000242485.1680.85400871.93210-0.356902.580401.48360K562HNRNPF
MRPL20ENSG00000242485.11824.765801183.184900.624905.227503.90110K562HNRNPM
MRPL20ENSG00000242485.1490.92840829.66580-0.757005.843404.42920K562KRR1
MRPL20ENSG00000242485.11203.18970923.307400.381903.502302.55070K562MAGOH
MRPL20ENSG00000242485.11247.50800921.401700.437004.436703.24210K562MATR3
MRPL20ENSG00000242485.1733.62920948.50080-0.370602.765301.88810K562METAP2
MRPL20ENSG00000242485.11337.415901606.11640-0.264102.979902.14170K562MTPAP
MRPL20ENSG00000242485.1622.25980794.72980-0.352902.693601.48260K562NCBP2
MRPL20ENSG00000242485.11307.314801784.55290-0.4490010.168008.86040K562NSUN2
MRPL20ENSG00000242485.11982.345101632.982300.279602.025601.32710K562PPIG
MRPL20ENSG00000242485.11711.79780945.856700.8557011.7972010.23800K562PRPF8
MRPL20ENSG00000242485.11790.20170897.066900.9967022.5162020.69190K562PTBP1
MRPL20ENSG00000242485.13547.036802880.435400.300202.963502.11780K562PUF60
MRPL20ENSG00000242485.12498.245003001.92000-0.265003.006402.00900K562PUM2
MRPL20ENSG00000242485.11226.38020860.063100.511805.154803.96770K562RBM22
MRPL20ENSG00000242485.1360.67480543.84370-0.592504.860503.01580K562RBM25
MRPL20ENSG00000242485.11191.82360905.106200.396903.049201.89620K562NELFE
MRPL20ENSG00000242485.11501.48330963.433800.640005.936604.73400K562RPS19
MRPL20ENSG00000242485.11518.69010952.167000.673409.634407.68370K562SAFB
MRPL20ENSG00000242485.11434.163701760.87840-0.296103.406102.50680K562SF3A3
MRPL20ENSG00000242485.1693.92590924.05320-0.413202.578501.64190K562SF3B1
MRPL20ENSG00000242485.11094.947401804.05620-0.7204020.6019018.41780K562SRPK2
MRPL20ENSG00000242485.11252.68340879.448700.510305.739804.72880K562SRSF1
MRPL20ENSG00000242485.11103.923601334.59620-0.273802.495501.38780K562SRSF7
MRPL20ENSG00000242485.1553.87300782.98560-0.499405.055203.23420K562SSB
MRPL20ENSG00000242485.1673.581401686.71590-1.324303.148601.59390K562SUPT6H
MRPL20ENSG00000242485.11750.710101071.945800.707609.118807.61910K562SYNCRIP
MRPL20ENSG00000242485.1330.40100562.95590-0.768803.833501.99750K562TAF15
MRPL20ENSG00000242485.11168.39720890.007700.392503.009702.27190K562TARDBP
MRPL20ENSG00000242485.1702.40580894.62150-0.349002.441301.56220K562TRIM56
MRPL20ENSG00000242485.12599.411303247.47300-0.321103.328001.77220K562UBE2L3
MRPL20ENSG00000242485.11482.140101892.19820-0.352405.534604.55830K562UPF1
MRPL20ENSG00000242485.11196.271201619.09600-0.436604.854803.67780K562WDR3
MRPL20ENSG00000242485.11989.380901683.660100.240603.108002.21280K562WDR43
MRPL20ENSG00000242485.11852.646702800.47550-0.596102.605801.77360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MRPL20 is not available on ENCORE database.





15 RBPs can affect the splicing of MRPL20 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412440.059000.000080.00262includedK562SF3B4
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.136000.000000.00002includedHepG2HNRNPK
SEMRPL20ENSG00000242485.1chr1-133773813379811337292133763613411881341266-0.122000.000000.00000excludedHepG2TBRG4
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.053000.000550.00847includedHepG2U2AF2
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.053000.000000.00000includedK562AQR
SEMRPL20ENSG00000242485.1chr1-1337841133798113372921337636134118813412660.059000.000010.00168includedK562SUPV3L1
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.060000.000010.00039includedK562PUS1
SEMRPL20ENSG00000242485.1chr1-133773813379811337292133763613411881341266-0.064000.000040.00382excludedHepG2PTBP1
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.163000.000000.00005includedHepG2DDX6
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.060000.000100.02552includedHepG2RBM15
SEMRPL20ENSG00000242485.1chr1-133773813379811337292133763613411881341266-0.060000.000010.00030excludedHepG2SRSF1
SEMRPL20ENSG00000242485.1chr1-133773813379811337292133763613411881341266-0.053000.000380.03267excludedHepG2IGF2BP3
SEMRPL20ENSG00000242485.1chr1-1337738133798113372921337636134118813412660.067000.000000.00041includedK562HNRNPK
A3SSMRPL20ENSG00000242485.1chr1-1337561133798113375611337805134118813412660.348000.001110.02890longerHepG2U2AF2
A3SSMRPL20ENSG00000242485.1chr1-1337561133798113375611337805134118813412660.473000.000010.00434longerK562HNRNPUL1
A3SSMRPL20ENSG00000242485.1chr1-1337738133798113377381337805134118813412900.109000.011330.05878longerK562AQR
A3SSMRPL20ENSG00000242485.1chr1-1341182134135413411821341266134228813423780.192000.000000.00000longerK562AQR
A3SSMRPL20ENSG00000242485.1chr1-133756113378051337561133765913411881341290-0.183000.018960.09109shorterK562AQR
RIMRPL20ENSG00000242485.1chr1-1341188134239913411881341266134228813423990.075000.000000.00016includedHepG2TIA1
RIMRPL20ENSG00000242485.1chr1-1341188134239913411881341266134228813423990.200000.000000.00000includedK562AQR
RIMRPL20ENSG00000242485.1chr1-1341188134239913411881341266134228813423990.073000.000230.01763includedHepG2LARP4
MXEMRPL20ENSG00000242485.1chr1-133773813378051337841133798113372921337636134118813412660.145000.008500.055471includedK562AQR
MXEMRPL20ENSG00000242485.1chr1-133773813378051337841133798113372921337636134118813412660.651000.000030.000391includedHepG2U2AF2
MXEMRPL20ENSG00000242485.1chr1-133773813378051337841133798113372921337636134118813412660.327000.000420.018791includedHepG2SF3B4
MXEMRPL20ENSG00000242485.1chr1-133773813378051337841133798113372921337636134118813412660.304000.003770.053621includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MRPL20 is not avaliable on ENCORE database.