MESDC1

General Information

Gene Name       : MESDC1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MESDC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MESDC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MESDC1 RNA is bound by 3 proteins.  







eCLIP assay for MESDC1 is not avaliable on ENCORE database.





3 proteins are bound to MESDC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158129614581296203+3'-UTR3.516083.68079HepG2FUBP3
chr158129569281295772+3'-UTR,CDS4.839944.17937HepG2PCBP2
chr158129578181295826+3'-UTR4.263636.14899HepG2PCBP2
chr158129350681293548+5'-UTR3.844546.86097HepG2DDX3X
chr158129392081293983+5'-UTR6.6699111.81529HepG2DDX3X
chr158129357681293659+5'-UTR5.1052722.16657HepG2DDX3X
chr158129373881293831+5'-UTR5.2034725.93904HepG2DDX3X
chr158129367781293738+5'-UTR5.1630116.07394HepG2DDX3X
chr158129336181293423+5'-UTR5.0780411.01919HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MESDC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MESDC1 is not available on ENCORE database.

  • 98 RBPs can affect the levels of MESDC1.  








The Knockdown/knockout RNA-Seq assay for MESDC1 is not available on ENCORE database.





98 RBPs can affect the gene expression of MESDC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MESDC1ENSG00000140406.2225.09220140.579100.679002.512502.00360HepG2AKAP1
MESDC1ENSG00000140406.272.59330127.36610-0.811102.277401.46330HepG2BCLAF1
MESDC1ENSG00000140406.2328.78250438.58670-0.415702.204501.66490HepG2BOP1
MESDC1ENSG00000140406.2129.60860308.64430-1.251805.647804.23010HepG2CCAR1
MESDC1ENSG00000140406.2148.60200220.41970-0.568803.040402.34990HepG2CKAP4
MESDC1ENSG00000140406.2228.10600402.64610-0.819805.128204.21770HepG2CPSF6
MESDC1ENSG00000140406.2218.78700145.202500.591402.782902.13910HepG2CELF1
MESDC1ENSG00000140406.2160.79550261.24300-0.700203.731802.56530HepG2DDX5
MESDC1ENSG00000140406.2209.34490115.718600.855203.783103.07070HepG2DDX6
MESDC1ENSG00000140406.2128.66200210.91340-0.713103.678202.91790HepG2DKC1
MESDC1ENSG00000140406.242.2731093.36940-1.143203.488502.23550HepG2AGO1
MESDC1ENSG00000140406.2191.71610119.657800.680002.174701.56280HepG2EIF4B
MESDC1ENSG00000140406.2156.86190299.65050-0.933806.176504.61360HepG2ESF1
MESDC1ENSG00000140406.2334.28390215.434400.633703.878402.88870HepG2EWSR1
MESDC1ENSG00000140406.2213.11740124.029500.780903.030702.30590HepG2FXR1
MESDC1ENSG00000140406.2162.70820456.42960-1.4881015.2597013.87500HepG2GPKOW
MESDC1ENSG00000140406.2125.15130210.47630-0.750004.728803.48410HepG2HDGF
MESDC1ENSG00000140406.270.17770120.88410-0.784502.338301.69590HepG2HNRNPC
MESDC1ENSG00000140406.2209.31980435.57930-1.057209.071608.00540HepG2HNRNPLL
MESDC1ENSG00000140406.2222.04450109.760701.016402.670101.70570HepG2IGF2BP3
MESDC1ENSG00000140406.2205.86530124.073200.730403.054302.36550HepG2MAGOH
MESDC1ENSG00000140406.2255.63210444.23660-0.797304.132802.93640HepG2MTPAP
MESDC1ENSG00000140406.2161.88310237.38950-0.552302.502801.34980HepG2NAA15
MESDC1ENSG00000140406.2206.73780127.679700.695202.726502.09800HepG2NCBP2
MESDC1ENSG00000140406.2237.52410154.848600.617103.076902.27310HepG2NOL12
MESDC1ENSG00000140406.2214.15150386.22510-0.850805.912904.84440HepG2NSUN2
MESDC1ENSG00000140406.254.37150102.19760-0.910402.458001.47730HepG2PCBP2
MESDC1ENSG00000140406.286.83260175.05780-1.011505.951204.86140HepG2PRPF4
MESDC1ENSG00000140406.244.95050111.19440-1.306704.380103.38760HepG2PRPF8
MESDC1ENSG00000140406.261.39480147.80700-1.267506.403005.54590HepG2PUF60
MESDC1ENSG00000140406.2232.41500156.892600.566802.861202.26050HepG2PUM1
MESDC1ENSG00000140406.2230.97810156.784900.558902.391401.76730HepG2PUM2
MESDC1ENSG00000140406.2146.58830224.54260-0.615203.430702.76230HepG2PUS1
MESDC1ENSG00000140406.2241.7226098.576401.293906.192405.16260HepG2RAVER1
MESDC1ENSG00000140406.2380.66060205.460700.889507.588306.82900HepG2RBM22
MESDC1ENSG00000140406.2174.51730115.760300.592102.255201.69190HepG2RECQL
MESDC1ENSG00000140406.2157.0490089.542900.810503.265002.60440HepG2RPS19
MESDC1ENSG00000140406.2141.5030083.456600.761602.382201.63500HepG2RPS2
MESDC1ENSG00000140406.255.81940109.99770-0.978602.669201.89560HepG2RRP9
MESDC1ENSG00000140406.2198.05930106.941800.889005.434504.58470HepG2SAFB2
MESDC1ENSG00000140406.2386.14220184.214601.067602.742901.30690HepG2SFPQ
MESDC1ENSG00000140406.2178.74650124.713700.519202.125601.55040HepG2SMN1
MESDC1ENSG00000140406.238.04490100.76090-1.405204.720403.43840HepG2SMNDC1
MESDC1ENSG00000140406.2211.15340479.71560-1.183908.245906.89940HepG2SNRNP70
MESDC1ENSG00000140406.2207.81700145.924600.510002.151501.59150HepG2SRSF5
MESDC1ENSG00000140406.269.37000201.46650-1.5382012.5842011.64640HepG2SSB
MESDC1ENSG00000140406.2261.95800165.967900.658303.829703.11950HepG2SUCLG1
MESDC1ENSG00000140406.285.12970143.45720-0.752902.063801.46710HepG2SUPV3L1
MESDC1ENSG00000140406.2294.14180424.55770-0.529403.123002.35820HepG2TARDBP
MESDC1ENSG00000140406.2561.62820197.655501.506505.411303.99210HepG2U2AF2
MESDC1ENSG00000140406.2274.38690203.459600.431402.221301.67170HepG2UTP3
MESDC1ENSG00000140406.279.44080141.21760-0.830002.493201.80210HepG2XRN2
MESDC1ENSG00000140406.2300.03270161.907300.889906.014204.20630K562AARS
MESDC1ENSG00000140406.2121.15110296.78180-1.292602.961802.35760K562AQR
MESDC1ENSG00000140406.2226.84780362.73280-0.677202.350501.55280K562BOP1
MESDC1ENSG00000140406.2381.31650252.914400.592204.304502.79400K562CCDC124
MESDC1ENSG00000140406.279.33320170.55060-1.104202.892901.34950K562CEBPZ
MESDC1ENSG00000140406.2180.45550477.51730-1.403909.383707.39980K562CNOT7
MESDC1ENSG00000140406.2227.31510385.71930-0.762903.577102.68610K562CPSF6
MESDC1ENSG00000140406.2116.63760348.42960-1.5788017.2025014.96500K562CELF1
MESDC1ENSG00000140406.291.49550195.99280-1.099002.862301.62890K562DDX21
MESDC1ENSG00000140406.2251.55580368.64280-0.551303.998103.23430K562DDX47
MESDC1ENSG00000140406.2415.41280161.781001.3604017.9602016.36050K562EIF2S2
MESDC1ENSG00000140406.2105.85340173.32300-0.711402.059001.34750K562EIF4A3
MESDC1ENSG00000140406.2139.61050224.19800-0.683403.693502.20270K562EXOSC5
MESDC1ENSG00000140406.2227.82950153.774000.567002.352201.32510K562FKBP4
MESDC1ENSG00000140406.2189.67920332.57050-0.810103.007502.05050K562FTO
MESDC1ENSG00000140406.2170.1004069.200501.297404.778301.97780K562FXR2
MESDC1ENSG00000140406.2136.39850301.21910-1.1430010.610508.51460K562GLRX3
MESDC1ENSG00000140406.2164.49980368.29110-1.162806.252305.06110K562GPKOW
MESDC1ENSG00000140406.291.24900193.52260-1.084605.160303.70850K562HNRNPA1
MESDC1ENSG00000140406.2164.28770278.31800-0.760502.541601.38700K562HNRNPA2B1
MESDC1ENSG00000140406.2264.61850446.86570-0.755903.895302.00790K562HNRNPAB
MESDC1ENSG00000140406.255.11960177.20680-1.6848010.442109.34070K562HNRNPC
MESDC1ENSG00000140406.2173.56760333.15500-0.940707.796705.93170K562HNRNPL
MESDC1ENSG00000140406.2448.28400227.993400.975307.348305.72090K562HNRNPM
MESDC1ENSG00000140406.2235.87530435.82920-0.885704.384802.56860K562ILF2
MESDC1ENSG00000140406.277.97040168.15930-1.108805.638603.50520K562ILF3
MESDC1ENSG00000140406.294.47190162.50570-0.782503.269301.64620K562KHDRBS1
MESDC1ENSG00000140406.2157.95520233.70410-0.565202.099701.39160K562KIF1C
MESDC1ENSG00000140406.2199.49970314.41140-0.656302.650001.73920K562KRR1
MESDC1ENSG00000140406.2242.59150157.964300.618803.095001.45510K562LSM11
MESDC1ENSG00000140406.2250.79630159.599700.652003.667702.69240K562MAGOH
MESDC1ENSG00000140406.2448.21860261.808500.775607.364905.74110K562MBNL1
MESDC1ENSG00000140406.2148.40140316.69340-1.0936010.594609.12010K562MTPAP
MESDC1ENSG00000140406.2110.37480351.87030-1.6726023.3522021.51010K562NSUN2
MESDC1ENSG00000140406.2293.48790458.75410-0.644402.671901.46110K562PABPC1
MESDC1ENSG00000140406.2134.04390243.49240-0.861202.822501.82010K562PABPN1
MESDC1ENSG00000140406.2211.89400142.000300.577302.423801.51080K562PCBP2
MESDC1ENSG00000140406.296.72780285.17890-1.5599012.7872011.01430K562PCBP3
MESDC1ENSG00000140406.285.91640218.74100-1.348209.978608.49820K562POLR2G
MESDC1ENSG00000140406.2159.2006094.718500.749002.565901.84330K562PRPF8
MESDC1ENSG00000140406.2518.87590155.062801.7424030.5860028.47430K562PTBP1
MESDC1ENSG00000140406.2484.28210322.181300.587904.561003.31990K562PUM2
MESDC1ENSG00000140406.2107.80940204.47150-0.923404.970802.83560K562RBM17
MESDC1ENSG00000140406.2226.16350148.674900.605102.952202.08170K562RBM22
MESDC1ENSG00000140406.2227.83190144.928000.652502.706701.72560K562RCC2
MESDC1ENSG00000140406.2140.7528073.213500.942903.013201.96330K562RPS3
MESDC1ENSG00000140406.239.2806096.83880-1.301804.016502.40430K562RRP9
MESDC1ENSG00000140406.2242.11960434.95670-0.845204.300602.30440K562SBDS
MESDC1ENSG00000140406.2146.23990347.21280-1.2475014.3154012.57400K562SF3A3
MESDC1ENSG00000140406.288.02570177.27080-1.010005.324603.54060K562SLBP
MESDC1ENSG00000140406.2249.52080137.390800.860804.885703.40630K562SRFBP1
MESDC1ENSG00000140406.2189.77140355.72760-0.906508.772207.20820K562SRPK2
MESDC1ENSG00000140406.284.31640174.84240-1.052202.762501.59890K562SRSF7
MESDC1ENSG00000140406.2118.57550332.78610-1.488804.779403.06200K562STAU1
MESDC1ENSG00000140406.2134.01640313.74620-1.227204.412901.88790K562SUGP2
MESDC1ENSG00000140406.2138.92020305.91250-1.138904.686502.65790K562SUPT6H
MESDC1ENSG00000140406.257.44090152.81810-1.411706.875005.34310K562TIAL1
MESDC1ENSG00000140406.2109.23090319.24580-1.5473016.8286014.68210K562WDR3
MESDC1ENSG00000140406.2178.31930331.98260-0.896608.791407.37030K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MESDC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of MESDC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MESDC1 is not avaliable on ENCORE database.