MEF2B

General Information

Gene Name       : MEF2B
Gene ID             : ENSG00000213999.15
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: MEF2B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MEF2BENSG00000213999.152.656.824.74ENCSR000AEF
HepG2MEF2BENSG00000213999.150.190.110.15ENCSR985KAT
K562MEF2BENSG00000213999.150.730.440.58ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MEF2B is not avaliable on ENCORE database.



Proteins bound to RNA
  • MEF2B RNA is bound by 10 proteins.  







eCLIP assay for MEF2B is not avaliable on ENCORE database.





10 proteins are bound to MEF2B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191929336619293425-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.530807.36645HepG2PPIG
chr191930287119302947-5'-UTR,CDS,intron-Distal,intron-Proximal3.974143.19625HepG2NCBP2
chr191929144919291498-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.781204.58287K562PRPF8
chr191929342519293496-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.5727410.63730HepG2PPIG
chr191927223919272328-intron-Distal4.776724.43116HepG2RBFOX2
chr191928990619290003-3'-UTR,intron-Distal4.085263.06617K562HNRNPK
chr191928071319280857-intron-Distal3.349353.59765K562ILF3
chr191929118519291306-3'-UTR,intron-Distal4.211383.62737K562HNRNPK
chr191929130619291397-3'-UTR,intron-Distal,intron-Proximal4.682278.84799HepG2QKI
chr191929139719291460-3'-UTR,intron-Distal,intron-Proximal5.7872511.38012HepG2QKI
chr191927159719271683-intron-Distal3.009613.27222HepG2CSTF2T
chr191928839819288478-intron-Distal5.7870318.09814K562PTBP1
chr191928331519283464-intron-Distal4.113568.85307HepG2PCBP2
chr191928989719290009-3'-UTR,intron-Distal4.006446.82867HepG2HNRNPK
chr191928074819280857-intron-Distal3.837573.43867K562CSTF2T
chr191928839919288484-intron-Distal4.7370112.58145HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MEF2B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MEF2B is not available on ENCORE database.

  • 81 RBPs can affect the levels of MEF2B.  








The Knockdown/knockout RNA-Seq assay for MEF2B is not available on ENCORE database.





81 RBPs can affect the gene expression of MEF2B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MEF2BENSG00000213999.1125.4983083.20140-1.706204.586901.54320HepG2AGGF1
MEF2BENSG00000213999.1158.4735011.984602.286505.561904.21470HepG2BCCIP
MEF2BENSG00000213999.1138.7018011.030501.810802.686101.41490HepG2DDX27
MEF2BENSG00000213999.1135.523908.936101.991003.671102.05950HepG2DDX28
MEF2BENSG00000213999.1144.7314011.780201.924803.659402.78390HepG2DDX55
MEF2BENSG00000213999.11261.3671034.042302.940604.799804.00560HepG2DDX6
MEF2BENSG00000213999.1147.8142016.711201.516503.681902.94900HepG2DNAJC2
MEF2BENSG00000213999.11192.9646048.014202.006704.724003.21800HepG2EIF2S2
MEF2BENSG00000213999.11106.3663035.162301.596802.049101.45280HepG2EIF4B
MEF2BENSG00000213999.11330.1114062.336302.4047031.9785030.32540HepG2ETF1
MEF2BENSG00000213999.11104.8208036.478501.522702.550301.88510HepG2FXR1
MEF2BENSG00000213999.1152.9619011.294802.229203.921302.26720HepG2HNRNPA0
MEF2BENSG00000213999.1161.8625017.020901.861704.678503.86770HepG2HNRNPA1
MEF2BENSG00000213999.1165.2796018.932901.785604.546803.67280HepG2HNRNPC
MEF2BENSG00000213999.1139.6821011.581801.776503.628401.87620HepG2HNRNPD
MEF2BENSG00000213999.1147.5602018.807701.338302.849202.23420HepG2HNRNPU
MEF2BENSG00000213999.1181.5758012.728902.6799010.454808.02600HepG2KHDRBS1
MEF2BENSG00000213999.1169.7841024.576801.505503.644301.99470HepG2NOLC1
MEF2BENSG00000213999.1141.3246010.801201.935703.423702.20030HepG2NONO
MEF2BENSG00000213999.11118.6583065.241600.862802.981201.31280HepG2NUP35
MEF2BENSG00000213999.1155.7700012.217902.190405.408304.13510HepG2PABPC1
MEF2BENSG00000213999.111.9803023.60940-3.575603.624802.82000HepG2RAVER1
MEF2BENSG00000213999.1162.0561012.910902.264906.437704.15470HepG2RBM47
MEF2BENSG00000213999.1151.5098023.218101.149502.281501.42210HepG2RPS10
MEF2BENSG00000213999.1175.2373029.766401.337703.642602.94680HepG2RPS19
MEF2BENSG00000213999.1152.1256013.415301.958004.531903.51020HepG2RPS3A
MEF2BENSG00000213999.1139.0689016.748901.221902.069101.49900HepG2SAFB2
MEF2BENSG00000213999.1167.9983012.633202.428204.660802.96410HepG2SART3
MEF2BENSG00000213999.1178.1497024.150501.694105.936704.49280HepG2SMNDC1
MEF2BENSG00000213999.1138.8667011.225901.791603.123701.39840HepG2SRP68
MEF2BENSG00000213999.1167.2892011.665702.528009.172507.08090HepG2STIP1
MEF2BENSG00000213999.1178.5141032.885301.255402.205801.63910HepG2SUCLG1
MEF2BENSG00000213999.1133.9814011.732001.534202.209401.59570HepG2SUPV3L1
MEF2BENSG00000213999.1125.922607.866601.720302.289001.37570HepG2TFIP11
MEF2BENSG00000213999.1178.4487018.274402.101807.945807.17840HepG2TIAL1
MEF2BENSG00000213999.1184.8810018.438602.202609.752208.79210HepG2TRIM56
MEF2BENSG00000213999.1189.0121030.248401.557003.381802.45680HepG2UBE2L3
MEF2BENSG00000213999.1147.0979010.756102.130402.274901.37140HepG2UPF2
MEF2BENSG00000213999.1129.1741069.52480-1.252803.143502.51180HepG2UTP3
MEF2BENSG00000213999.1148.6646012.015502.017904.932903.45710HepG2XPO5
MEF2BENSG00000213999.1199.3467011.548703.1046012.4734010.95750HepG2XRN2
MEF2BENSG00000213999.1188.48790267.20020-1.5944015.0388013.82550K562AGGF1
MEF2BENSG00000213999.11113.34230278.02980-1.2946010.609609.22350K562AKAP8L
MEF2BENSG00000213999.1194.46390291.71230-1.626707.719206.07470K562ATP5C1
MEF2BENSG00000213999.1159.2686017.511601.758904.168602.50210K562BCCIP
MEF2BENSG00000213999.1198.2970035.901601.453002.761901.71000K562CCAR1
MEF2BENSG00000213999.11194.06960319.33230-0.718505.173903.52090K562CCDC124
MEF2BENSG00000213999.11147.8543058.179801.345506.305704.02370K562CKAP4
MEF2BENSG00000213999.11166.52800313.49860-0.912706.819104.52050K562DDX19B
MEF2BENSG00000213999.1194.8673040.206001.238403.167101.73630K562DHX30
MEF2BENSG00000213999.11207.6320054.120601.9397015.9873014.47200K562EIF2S2
MEF2BENSG00000213999.11120.6425036.512401.724206.364604.78720K562EIF3A
MEF2BENSG00000213999.11111.3483025.296702.138004.539703.48870K562EIF4A3
MEF2BENSG00000213999.11156.4557074.900001.062603.929902.38030K562EXOSC5
MEF2BENSG00000213999.1198.4579038.444001.356703.845302.83030K562FMR1
MEF2BENSG00000213999.1188.5351032.583001.442004.700203.47830K562FTO
MEF2BENSG00000213999.1195.6826043.155201.148604.021802.65330K562GLRX3
MEF2BENSG00000213999.1181.3531036.079401.172903.245902.38810K562GPKOW
MEF2BENSG00000213999.11162.6246034.506302.2365014.4149013.13800K562HNRNPC
MEF2BENSG00000213999.1170.2731030.810401.189503.012501.81730K562HNRNPF
MEF2BENSG00000213999.11214.5535060.521801.8257013.5765011.86250K562HSPD1
MEF2BENSG00000213999.1187.3868036.224101.270403.317201.68560K562KHDRBS1
MEF2BENSG00000213999.11144.97830295.07360-1.025206.743305.32220K562KIF1C
MEF2BENSG00000213999.1168.8580030.803001.160502.465801.58930K562KRR1
MEF2BENSG00000213999.1174.3356030.760101.272903.667601.84240K562LSM11
MEF2BENSG00000213999.1178.10240231.69380-1.568809.294307.30190K562NAA15
MEF2BENSG00000213999.11142.7010050.398301.501408.771707.54500K562NSUN2
MEF2BENSG00000213999.1191.2747036.009501.341704.464001.81060K562PARN
MEF2BENSG00000213999.1189.6076050.691000.821802.387701.62740K562PPIG
MEF2BENSG00000213999.1167.7039030.937501.129802.698001.80730K562PSIP1
MEF2BENSG00000213999.11112.48980275.75890-1.293609.479208.52360K562PUS1
MEF2BENSG00000213999.11126.56210268.66090-1.085908.309007.30830K562RBM15
MEF2BENSG00000213999.1134.140508.509002.004303.664301.99450K562RBM34
MEF2BENSG00000213999.1163.8404028.221401.177602.917101.89860K562RCC2
MEF2BENSG00000213999.1191.4417038.634101.242902.216701.32950K562RPS3
MEF2BENSG00000213999.11117.3565049.756601.237805.624104.49200K562SF3A3
MEF2BENSG00000213999.11254.52890120.459701.079203.950702.28100K562SFPQ
MEF2BENSG00000213999.1167.8429026.753701.342403.500302.31270K562SRFBP1
MEF2BENSG00000213999.1195.9406050.979000.912102.990702.02400K562SRPK2
MEF2BENSG00000213999.1142.051308.915302.237704.612803.70390K562SRSF1
MEF2BENSG00000213999.1193.5893037.255801.328802.686601.65560K562SRSF4
MEF2BENSG00000213999.1160.3304015.597001.951503.811002.60470K562SUPV3L1
MEF2BENSG00000213999.1141.466209.032102.198703.256302.48840K562TARDBP
MEF2BENSG00000213999.1162.370308.710102.840006.504905.17100K562TIA1
MEF2BENSG00000213999.11109.4957031.607701.792407.984806.18260K562TRIM56
MEF2BENSG00000213999.11137.33010279.56080-1.025504.652502.81430K562UTP18
MEF2BENSG00000213999.1188.8661045.724400.958603.092502.16930K562WDR3
MEF2BENSG00000213999.1182.0964047.563800.787402.337701.55470K562WDR43
MEF2BENSG00000213999.1171.9685016.813702.097604.310102.67820K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MEF2B is not available on ENCORE database.





1 RBPs can affect the splicing of MEF2B :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMEF2BENSG00000213999.11chr19-1926783319267951192614901926157319281013192810980.557000.006590.07661includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MEF2B is not avaliable on ENCORE database.